mRNA_P-wetherbeei_contig16395.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16395.1.1
Unique NamemRNA_P-wetherbeei_contig16395.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Match: A0A7C4TRU5_9HYPH (D-glycerate dehydrogenase n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7C4TRU5_9HYPH)

HSP 1 Score: 593 bits (1529), Expect = 4.910e-213
Identity = 284/332 (85.54%), Postives = 312/332 (93.98%), Query Frame = 1
Query:    1 MPNPAKKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKTADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGHRIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATYWDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEVIDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATIEGRVDTGEKVIINIKTFLDGHTPPDRVHPAMF 996
            MP  AK+PIVIVTR+LP+VVETRMRELFDARLNVDDKPM++A+L+AA+K A VLVPTVTDR+D  +L +AGPD++LIANFG GVDNIDLD ARN+ IIVTNTPGVLTEDTADMTMALILAVPRRLAEG  FL+DPRNHW GWSPTWMLGHRIWGKRLGI+GMGRIG+AVARRARAFGLQ+HYHNRRRV E IEQELEATYWDSLDQMLARMDI+S+NCPHTP TYHLLSARRLKLLKPTAY+VNT+RGEVIDENELARL+E GAIAGAGLDV+EHEPA+NPRL+ S RVVALPHMGSATIEGR+D GEKVIINIKTFLDGH+PPDRVHPAMF
Sbjct:    1 MPGSAKRPIVIVTRKLPEVVETRMRELFDARLNVDDKPMSQAELIAAVKNAHVLVPTVTDRIDRTVLSQAGPDLKLIANFGTGVDNIDLDTARNRHIIVTNTPGVLTEDTADMTMALILAVPRRLAEGTAFLKDPRNHWAGWSPTWMLGHRIWGKRLGIIGMGRIGRAVARRARAFGLQVHYHNRRRVPEEIEQELEATYWDSLDQMLARMDIISVNCPHTPATYHLLSARRLKLLKPTAYVVNTARGEVIDENELARLIEAGAIAGAGLDVFEHEPAINPRLLASDRVVALPHMGSATIEGRIDMGEKVIINIKTFLDGHSPPDRVHPAMF 332          
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Match: A0A2W4RTJ2_9PROT (D-glycerate dehydrogenase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RTJ2_9PROT)

HSP 1 Score: 576 bits (1485), Expect = 2.480e-206
Identity = 276/332 (83.13%), Postives = 309/332 (93.07%), Query Frame = 1
Query:    1 MPNPAKKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKTADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGHRIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATYWDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEVIDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATIEGRVDTGEKVIINIKTFLDGHTPPDRVHPAMF 996
            M + AKKP+VIVTR+LPD+VETRMRELFDARLN+DDKPM++A+L+ A+K ADVLVPTVTDR+D  +L +AGP ++LIANFG GVDNIDL+ ARN+GIIVTNTPGVLTEDTADMTMALILAVPRRLAEGA +L++ +N WPGWSPTWMLGHRI+GKRLGI+GMGRIGQAVARRARAFGLQIHYHNRR V E IEQELEATYWDSLDQMLARMDI+S+NCPHTP TYHLLSARRL+LLKPTAYIVNT+RGEVIDENELARL+E G IAGAGLDVYEHEPAVNP+L+ S RVVALPHMGSATIEGR++ GEKVIINIK FLDGH+PPDRVHPAMF
Sbjct:    1 MSSKAKKPLVIVTRKLPDIVETRMRELFDARLNIDDKPMSQAELIEAVKKADVLVPTVTDRIDRTVLSQAGPQLKLIANFGTGVDNIDLETARNRGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAAYLKEHKNDWPGWSPTWMLGHRIYGKRLGIIGMGRIGQAVARRARAFGLQIHYHNRRPVAEEIEQELEATYWDSLDQMLARMDIISVNCPHTPATYHLLSARRLRLLKPTAYIVNTARGEVIDENELARLIEAGRIAGAGLDVYEHEPAVNPKLLASDRVVALPHMGSATIEGRIEMGEKVIINIKAFLDGHSPPDRVHPAMF 332          
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Match: A0A2S5P5N8_HYPSQ (D-glycerate dehydrogenase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5P5N8_HYPSQ)

HSP 1 Score: 569 bits (1466), Expect = 1.950e-203
Identity = 270/332 (81.33%), Postives = 307/332 (92.47%), Query Frame = 1
Query:    1 MPNPAKKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKTADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGHRIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATYWDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEVIDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATIEGRVDTGEKVIINIKTFLDGHTPPDRVHPAMF 996
            MP   +KP++IVTR+LPDVVETRMRELFDARLN DDKPM++A+L+AA + ADVLVPTVTDR+D  ++ +AGP+++LIANFG GVDNIDLD +R +GIIVTNTPGVLTEDTADMTMALILAVPRRLAEG  +++DP+++W GWSPTWMLGHRI+GKRLGIVGMGRIGQAVARRA+AFGLQIHYHNRRRV E +EQELEATYW+SLDQML+R+DIVS+NCPHTP TYHLLSARRLKLLKPTAY+VNT+RGEVIDENELAR++E G IAGAGLDV+EHEPAVNP+L  S RVVALPHMGSATIEGRVD GEKVIINIKTFLDGH PPDRVHPAMF
Sbjct:    1 MPTSPRKPVIIVTRKLPDVVETRMRELFDARLNTDDKPMSQAELVAAAQAADVLVPTVTDRIDRAVISQAGPNLKLIANFGTGVDNIDLDTSRTRGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGTAYMKDPKSNWAGWSPTWMLGHRIYGKRLGIVGMGRIGQAVARRAKAFGLQIHYHNRRRVAEEVEQELEATYWESLDQMLSRVDIVSVNCPHTPATYHLLSARRLKLLKPTAYLVNTARGEVIDENELARIIEAGGIAGAGLDVFEHEPAVNPKLRVSERVVALPHMGSATIEGRVDMGEKVIINIKTFLDGHAPPDRVHPAMF 332          
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Match: A0A125NUM0_HYPSL (Glyoxylate reductase n=5 Tax=Hyphomicrobium TaxID=81 RepID=A0A125NUM0_HYPSL)

HSP 1 Score: 566 bits (1459), Expect = 2.270e-202
Identity = 270/332 (81.33%), Postives = 305/332 (91.87%), Query Frame = 1
Query:    1 MPNPAKKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKTADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGHRIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATYWDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEVIDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATIEGRVDTGEKVIINIKTFLDGHTPPDRVHPAMF 996
            MPN A+KPIVIVTR+LPDVVETRMRELFDARLNVDD+PM++  +  ALK ADVLVPTVTDR+D  ++ +AGP +RLIANFG GVDNIDLD ARN+GI VTNTPGVLTEDTADMTMALILAVPRRLAEGA +L++    W GWSPTWMLGHRI+GKRLGI+GMGRIGQAVARRA+AFGLQIHYHNRRRV + +E+ELEATYW+SLDQML R+DIVS+NCPHTPGTYHLLSARRL+LLKP+AY+VNTSRGEVIDENELARL+E GAIAGAGLDV+E+EPAVNP+++NS RVVALPHM SAT+EGR+D GEKVIINIKTFLDGH PPDRVHPAMF
Sbjct:    1 MPNSARKPIVIVTRKLPDVVETRMRELFDARLNVDDQPMSQGQITEALKIADVLVPTVTDRIDRAVISQAGPQLRLIANFGTGVDNIDLDTARNRGITVTNTPGVLTEDTADMTMALILAVPRRLAEGAAYLKEHHAGWTGWSPTWMLGHRIFGKRLGIIGMGRIGQAVARRAKAFGLQIHYHNRRRVSQDVERELEATYWESLDQMLTRVDIVSVNCPHTPGTYHLLSARRLRLLKPSAYVVNTSRGEVIDENELARLIEAGAIAGAGLDVFENEPAVNPKILNSDRVVALPHMSSATVEGRIDMGEKVIINIKTFLDGHAPPDRVHPAMF 332          
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Match: A0A537RNW4_9PROT (D-glycerate dehydrogenase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A537RNW4_9PROT)

HSP 1 Score: 564 bits (1454), Expect = 1.260e-201
Identity = 272/327 (83.18%), Postives = 299/327 (91.44%), Query Frame = 1
Query:   16 KKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKTADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGHRIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATYWDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEVIDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATIEGRVDTGEKVIINIKTFLDGHTPPDRVHPAMF 996
            KKPIVIVTR+LP+ VETRMRELFDARLNV D PM+ A+L  A+K A VLVPTVTDR+D  +L +AGP ++LIANFGNGVDNIDLD AR +GIIVTNTPGVLTEDTADMTMALILAVPRRLAEGA  L+D + HWPGWSPTWMLGHRIWGKRLGI+GMGRIGQAVARRARAFGLQIHY+NRRRV E +EQELEATYW+SLDQMLARMDIVS+NCPHTP TYHLLSARRLKLLKPTAYIVNT+RGEVIDENELAR+VE G IAGAGLDV+E+EPA+NP+L+ S RVVALPHMGSATIEGR+D GEKVIIN+KTFLDGH PPDRVH AMF
Sbjct:    5 KKPIVIVTRKLPEAVETRMRELFDARLNVADNPMSHAELAEAVKAAHVLVPTVTDRIDRSLLSQAGPQLKLIANFGNGVDNIDLDTARVRGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAALLKDAKQHWPGWSPTWMLGHRIWGKRLGIIGMGRIGQAVARRARAFGLQIHYYNRRRVSEEVEQELEATYWESLDQMLARMDIVSVNCPHTPATYHLLSARRLKLLKPTAYIVNTARGEVIDENELARMVEAGQIAGAGLDVFENEPAINPKLLASDRVVALPHMGSATIEGRIDMGEKVIINVKTFLDGHNPPDRVHAAMF 331          
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Match: A0A0D6JFM2_9HYPH (Glyoxylate reductase n=2 Tax=Filomicrobium TaxID=119044 RepID=A0A0D6JFM2_9HYPH)

HSP 1 Score: 564 bits (1453), Expect = 1.860e-201
Identity = 270/332 (81.33%), Postives = 304/332 (91.57%), Query Frame = 1
Query:    1 MPNPAKKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKTADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGHRIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATYWDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEVIDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATIEGRVDTGEKVIINIKTFLDGHTPPDRVHPAMF 996
            MPN  KKP+VIVTR+LP+VVETRMRELF+A LNV D+PM++A+L+ A+KTADVLVPTVTDR+D  ++ +AG  ++LIANFG GVDNIDLD ARN+GI VTNTPGVLTEDTADMTMALIL+VPRRLAE  Q+L+DP N W GWSPTWMLGHRI+GKRLGI+GMGRIG AVARRA+AFGLQIHYHNRRR+ E IEQE EATYWDSLDQMLARMDI+S+NCPHTP TYHLLSARRL+L+KPTAYIVNT+RGEVIDENELARLVE  AIAGAGLDV+EHEPAVNP+L+ SSRVVALPHMGSAT+EGRVD GEKVIINIKTF+DGH PPDRVHPAMF
Sbjct:    1 MPNSPKKPVVIVTRKLPEVVETRMRELFEAHLNVADEPMSQAELVEAVKTADVLVPTVTDRIDRAVISQAGEKLKLIANFGTGVDNIDLDTARNRGITVTNTPGVLTEDTADMTMALILSVPRRLAEATQYLKDPANEWHGWSPTWMLGHRIYGKRLGIIGMGRIGSAVARRAKAFGLQIHYHNRRRLPEEIEQEYEATYWDSLDQMLARMDIISVNCPHTPATYHLLSARRLRLMKPTAYIVNTARGEVIDENELARLVEAEAIAGAGLDVFEHEPAVNPKLLRSSRVVALPHMGSATLEGRVDMGEKVIINIKTFMDGHNPPDRVHPAMF 332          
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Match: UPI000930B9B7 (D-glycerate dehydrogenase n=1 Tax=Hyphomicrobium sp. CS1BSMeth3 TaxID=1892844 RepID=UPI000930B9B7)

HSP 1 Score: 562 bits (1449), Expect = 7.570e-201
Identity = 270/332 (81.33%), Postives = 306/332 (92.17%), Query Frame = 1
Query:    1 MPNPAKKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKTADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGHRIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATYWDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEVIDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATIEGRVDTGEKVIINIKTFLDGHTPPDRVHPAMF 996
            MPN  KKP+VIVTR+LP++VETRMRELF+ARLN+DD P+++A L+ A K A+VLVPTVTDR+D  +L +AGP ++LIANFG GVDNIDLD ARN+GI VTNTPGVLTEDTADMTMALILAVPRRL EGA  LRDPR +W GWSPTWMLGHRI+GKRLGI+GMGRIGQAVARRA AFGLQ+HYHNRRR+ E +EQEL+ATYWDSLDQMLARMDI+S+NCPHTP TYHLLSARRLKL+KPTAYIVNT+RGEVIDENELARLVE+GAIAGAGLDV+E+EPA+NP+L+ S RVVALPHMGSATIEGRVD GEKVIINIKTFLDGH+PPDRV+PAMF
Sbjct:    1 MPNAPKKPLVIVTRKLPEIVETRMRELFNARLNLDDAPLSQAALVEAAKAAEVLVPTVTDRIDRAVLSQAGPQLKLIANFGTGVDNIDLDTARNRGITVTNTPGVLTEDTADMTMALILAVPRRLVEGATLLRDPRANWGGWSPTWMLGHRIFGKRLGIIGMGRIGQAVARRAVAFGLQVHYHNRRRLPEAVEQELDATYWDSLDQMLARMDIISVNCPHTPATYHLLSARRLKLMKPTAYIVNTARGEVIDENELARLVESGAIAGAGLDVFENEPAINPKLLASPRVVALPHMGSATIEGRVDMGEKVIINIKTFLDGHSPPDRVYPAMF 332          
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Match: A0A101WA77_9PROT (D-glycerate dehydrogenase n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A101WA77_9PROT)

HSP 1 Score: 562 bits (1448), Expect = 1.070e-200
Identity = 270/332 (81.33%), Postives = 300/332 (90.36%), Query Frame = 1
Query:    1 MPNPAKKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKTADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGHRIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATYWDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEVIDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATIEGRVDTGEKVIINIKTFLDGHTPPDRVHPAMF 996
            MPN  KKP VIVTR+LPDVVETRMRELFDARLNVDD+PMT A+L+ A+KTADVLVPTVTDR+D  ++ +AG  +RLIANFG GVDNIDLD A N+GIIVTNTPGVLTEDTADMTMALILAVPRRLAE   ++++P   W GWSPTWMLGHRI+GKRLGI+GMGRIGQAVARRA+AFGLQIHYHNRRR+ E+IEQE EATYWDSLDQMLARMDIVS+NCPHTP TYHLLSARRL+LLKP AYIVNT+RGEVIDENELARL+E   IAGAGLDV+EHEPAVNP+L+ S RVVALPH+GSATIEGR+D GEKVIINIKTF+DGH PPDRVH AMF
Sbjct:    1 MPNSPKKPTVIVTRKLPDVVETRMRELFDARLNVDDRPMTNAELVEAVKTADVLVPTVTDRIDRALISQAGDQLRLIANFGTGVDNIDLDTASNRGIIVTNTPGVLTEDTADMTMALILAVPRRLAEATLYMKNPNTEWAGWSPTWMLGHRIFGKRLGIIGMGRIGQAVARRAKAFGLQIHYHNRRRLPESIEQEFEATYWDSLDQMLARMDIVSVNCPHTPATYHLLSARRLRLLKPDAYIVNTARGEVIDENELARLIEHNTIAGAGLDVFEHEPAVNPKLLQSDRVVALPHLGSATIEGRIDMGEKVIINIKTFIDGHNPPDRVHSAMF 332          
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Match: A0A833D4F8_9HYPH (D-glycerate dehydrogenase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A833D4F8_9HYPH)

HSP 1 Score: 562 bits (1448), Expect = 1.160e-200
Identity = 269/330 (81.52%), Postives = 300/330 (90.91%), Query Frame = 1
Query:    7 NPAKKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKTADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGHRIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATYWDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEVIDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATIEGRVDTGEKVIINIKTFLDGHTPPDRVHPAMF 996
            N AKKPIVIVTR+LP+VVETRMRELFDARLN+ DKP+T++DL+ A K ADVLVPTVTD++D  ++ +AGP ++LIANFG GVDNIDLD ARN+GIIVTNTPGVLTEDTADMTMALILAVPRRL EGA  L+  +  W GWSPTWMLGHRIWGKRLGI+GMGRIGQAVARRARAFGLQIHYHNRRRVGE  E+ELEATYW+SLDQML+RMDIVS+NCPHTP TYHLLSARRLKLLKP +YIVNT+RGEVIDEN LAR++E G IAGAGLDV+EHEPA+NP+L NS RVVALPHMGSATIEGRVD GEKVIINIKTFLDGH PPDRV+P+MF
Sbjct:    5 NTAKKPIVIVTRKLPEVVETRMRELFDARLNIQDKPLTQSDLVEAAKNADVLVPTVTDKIDRAVISQAGPQLKLIANFGTGVDNIDLDTARNRGIIVTNTPGVLTEDTADMTMALILAVPRRLVEGALTLKSQKKQWSGWSPTWMLGHRIWGKRLGIIGMGRIGQAVARRARAFGLQIHYHNRRRVGEETERELEATYWESLDQMLSRMDIVSVNCPHTPATYHLLSARRLKLLKPASYIVNTARGEVIDENALARMIEAGDIAGAGLDVFEHEPAINPKLQNSDRVVALPHMGSATIEGRVDMGEKVIINIKTFLDGHAPPDRVYPSMF 334          
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Match: A0A7Y5CYE3_HYPSQ (D-glycerate dehydrogenase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CYE3_HYPSQ)

HSP 1 Score: 561 bits (1447), Expect = 1.530e-200
Identity = 270/331 (81.57%), Postives = 303/331 (91.54%), Query Frame = 1
Query:    1 MPNPAKKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKTADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVTNTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGHRIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATYWDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEVIDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATIEGRVDTGEKVIINIKTFLDGHTPPDRVHPAM 993
            MP+  KKP+VIVTR+LP VVETRM ELF+ RLN DDKPMT+A+L+AA+K ADVLVPTVTDR+D  +L +AGP +RLIANFG GVDN+DLD ARN+GI+VTNTPGVLTEDTADMTMALILAVPRR+AEGA ++R+P N W GWSPTWMLGHRI+GKRLGIVGMGRIGQAVARRA+AFGLQIHYHNRRRV E +EQELEATYW+SLDQML R+DIVS+NCPHTP TYHLLSARRLKLLKP+AY+VNT+RGEVIDENELARL+E+GAIAGAGLDV+EHEPAVNPRL+ S RVVALPHM SATIEGR+D GEKVIINIK F DGH PPDRVHPAM
Sbjct:    1 MPSIPKKPLVIVTRKLPGVVETRMCELFETRLNHDDKPMTQAELVAAVKVADVLVPTVTDRIDRSVLTQAGPQLRLIANFGTGVDNVDLDTARNRGILVTNTPGVLTEDTADMTMALILAVPRRVAEGAAYMRNPENKWSGWSPTWMLGHRIYGKRLGIVGMGRIGQAVARRAKAFGLQIHYHNRRRVSEALEQELEATYWESLDQMLTRVDIVSVNCPHTPATYHLLSARRLKLLKPSAYVVNTARGEVIDENELARLLESGAIAGAGLDVFEHEPAVNPRLLASDRVVALPHMSSATIEGRIDMGEKVIINIKAFSDGHAPPDRVHPAM 331          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16395.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TRU5_9HYPH4.910e-21385.54D-glycerate dehydrogenase n=3 Tax=Hyphomicrobiales... [more]
A0A2W4RTJ2_9PROT2.480e-20683.13D-glycerate dehydrogenase n=2 Tax=Proteobacteria b... [more]
A0A2S5P5N8_HYPSQ1.950e-20381.33D-glycerate dehydrogenase n=1 Tax=Hyphomicrobium s... [more]
A0A125NUM0_HYPSL2.270e-20281.33Glyoxylate reductase n=5 Tax=Hyphomicrobium TaxID=... [more]
A0A537RNW4_9PROT1.260e-20183.18D-glycerate dehydrogenase n=2 Tax=Alphaproteobacte... [more]
A0A0D6JFM2_9HYPH1.860e-20181.33Glyoxylate reductase n=2 Tax=Filomicrobium TaxID=1... [more]
UPI000930B9B77.570e-20181.33D-glycerate dehydrogenase n=1 Tax=Hyphomicrobium s... [more]
A0A101WA77_9PROT1.070e-20081.33D-glycerate dehydrogenase n=1 Tax=Alphaproteobacte... [more]
A0A833D4F8_9HYPH1.160e-20081.52D-glycerate dehydrogenase n=1 Tax=Hyphomicrobiacea... [more]
A0A7Y5CYE3_HYPSQ1.530e-20081.57D-glycerate dehydrogenase n=1 Tax=Hyphomicrobium s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16395contigP-wetherbeei_contig16395:92..1090 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1267005.KB911257_gene762
Preferred namegyaR
PFAMs2-Hacid_dh,2-Hacid_dh_C
Model size999
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00031,RC00042
KEGG koko:K00015
KEGG ReactionR00717,R01388
KEGG Pathwayko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Exons1
Evalue1.58e-204
EggNOG OGsCOG1052@1|root,COG1052@2|Bacteria,1MU2D@1224|Proteobacteria,2TSM8@28211|Alphaproteobacteria,3N6JG@45401|Hyphomicrobiaceae
EC1.1.1.26
DescriptionD-isomer specific 2-hydroxyacid dehydrogenase
Cds size999
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186085.4381282-CDS-P-wetherbeei_contig16395:91..10901683186085.4381282-CDS-P-wetherbeei_contig16395:91..1090Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16395 92..1090 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16395.1.1prot_P-wetherbeei_contig16395.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16395 92..1090 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16395.1.1

>prot_P-wetherbeei_contig16395.1.1 ID=prot_P-wetherbeei_contig16395.1.1|Name=mRNA_P-wetherbeei_contig16395.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=333bp
MPNPAKKPIVIVTRRLPDVVETRMRELFDARLNVDDKPMTKADLLAALKT
ADVLVPTVTDRLDAGMLKEAGPDMRLIANFGNGVDNIDLDAARNKGIIVT
NTPGVLTEDTADMTMALILAVPRRLAEGAQFLRDPRNHWPGWSPTWMLGH
RIWGKRLGIVGMGRIGQAVARRARAFGLQIHYHNRRRVGETIEQELEATY
WDSLDQMLARMDIVSINCPHTPGTYHLLSARRLKLLKPTAYIVNTSRGEV
IDENELARLVETGAIAGAGLDVYEHEPAVNPRLINSSRVVALPHMGSATI
EGRVDTGEKVIINIKTFLDGHTPPDRVHPAMF*
back to top

mRNA from alignment at P-wetherbeei_contig16395:92..1090-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16395.1.1 ID=mRNA_P-wetherbeei_contig16395.1.1|Name=mRNA_P-wetherbeei_contig16395.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig16395:92..1090- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCAAATCCGGCCAAGAAGCCTATCGTCATCGTCACGCGCCGACTGCC CGATGTGGTGGAGACGCGGATGCGCGAGCTGTTCGATGCCCGCCTCAACG TCGACGACAAGCCGATGACGAAGGCCGATCTGCTGGCCGCGCTGAAAACC GCCGACGTGCTGGTACCTACCGTCACGGATCGCCTCGACGCCGGGATGCT CAAGGAGGCCGGGCCCGACATGCGGCTGATCGCCAATTTCGGTAATGGCG TCGACAACATCGATCTGGACGCCGCACGCAACAAGGGCATCATCGTCACC AACACGCCGGGCGTGCTGACCGAAGATACCGCCGACATGACGATGGCGCT GATCCTGGCCGTGCCGCGACGGCTTGCGGAAGGCGCCCAGTTCCTTCGCG ACCCCCGCAATCACTGGCCCGGATGGTCGCCGACATGGATGCTCGGTCAT CGCATCTGGGGCAAGCGGCTCGGTATCGTCGGCATGGGACGGATCGGTCA GGCCGTGGCCCGCCGCGCCCGCGCGTTCGGTCTGCAGATCCACTATCACA ACCGCCGGCGCGTCGGCGAAACGATCGAACAGGAACTCGAGGCGACCTAC TGGGACAGCCTCGACCAGATGCTGGCGCGGATGGATATCGTATCGATCAA CTGCCCCCATACGCCAGGGACGTACCATCTTCTGTCGGCGCGCCGCCTCA AGCTGCTGAAGCCGACGGCCTACATCGTCAACACGTCGCGTGGCGAGGTG ATCGACGAGAACGAGCTTGCACGCCTCGTCGAAACAGGCGCGATCGCGGG GGCGGGCCTCGACGTCTACGAGCACGAACCTGCCGTCAATCCACGCCTGA TCAATTCCAGTCGCGTTGTCGCGCTACCGCATATGGGGTCCGCCACCATC GAGGGCCGCGTCGATACGGGTGAGAAGGTGATCATCAACATCAAGACCTT CCTCGACGGGCACACGCCGCCCGATCGCGTGCATCCCGCGATGTTTTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig16395:92..1090-

>mRNA_P-wetherbeei_contig16395.1.1 ID=mRNA_P-wetherbeei_contig16395.1.1|Name=mRNA_P-wetherbeei_contig16395.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig16395:92..1090- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCAAATCCGGCCAAGAAGCCTATCGTCATCGTCACGCGCCGACTGCC
CGATGTGGTGGAGACGCGGATGCGCGAGCTGTTCGATGCCCGCCTCAACG
TCGACGACAAGCCGATGACGAAGGCCGATCTGCTGGCCGCGCTGAAAACC
GCCGACGTGCTGGTACCTACCGTCACGGATCGCCTCGACGCCGGGATGCT
CAAGGAGGCCGGGCCCGACATGCGGCTGATCGCCAATTTCGGTAATGGCG
TCGACAACATCGATCTGGACGCCGCACGCAACAAGGGCATCATCGTCACC
AACACGCCGGGCGTGCTGACCGAAGATACCGCCGACATGACGATGGCGCT
GATCCTGGCCGTGCCGCGACGGCTTGCGGAAGGCGCCCAGTTCCTTCGCG
ACCCCCGCAATCACTGGCCCGGATGGTCGCCGACATGGATGCTCGGTCAT
CGCATCTGGGGCAAGCGGCTCGGTATCGTCGGCATGGGACGGATCGGTCA
GGCCGTGGCCCGCCGCGCCCGCGCGTTCGGTCTGCAGATCCACTATCACA
ACCGCCGGCGCGTCGGCGAAACGATCGAACAGGAACTCGAGGCGACCTAC
TGGGACAGCCTCGACCAGATGCTGGCGCGGATGGATATCGTATCGATCAA
CTGCCCCCATACGCCAGGGACGTACCATCTTCTGTCGGCGCGCCGCCTCA
AGCTGCTGAAGCCGACGGCCTACATCGTCAACACGTCGCGTGGCGAGGTG
ATCGACGAGAACGAGCTTGCACGCCTCGTCGAAACAGGCGCGATCGCGGG
GGCGGGCCTCGACGTCTACGAGCACGAACCTGCCGTCAATCCACGCCTGA
TCAATTCCAGTCGCGTTGTCGCGCTACCGCATATGGGGTCCGCCACCATC
GAGGGCCGCGTCGATACGGGTGAGAAGGTGATCATCAACATCAAGACCTT
CCTCGACGGGCACACGCCGCCCGATCGCGTGCATCCCGCGATGTTTTAG
back to top