mRNA_P-wetherbeei_contig1638.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Match: D7G1F6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F6_ECTSI) HSP 1 Score: 229 bits (585), Expect = 4.380e-67 Identity = 125/215 (58.14%), Postives = 148/215 (68.84%), Query Frame = 1
Query: 151 RFEYLHNIGLALLSAAMLVGILLSISKSGKGSTYYALVCRRF-EEDALFELTAHAFFWSKIWEWGDTALLVAKGKSITWLHYTHHASTCFLTGLNMTPVYNAMWSVVCATNSFVHAWMYLYYAHPR--LLRWSRRLLTLAQMAQHAFVLATGVYVVWRRYGGADTGGNAGNGGGGLEDCYNDSTPILVGLALYLMYLLFFAAFYKRRYASSSGKA 786
R E HNI LAL SAAMLVGI+ S SGK S+ +A++C F EED +F++TA FFWSK WEW DTA+LVAKGK ++WL YTHHAST LT LNM P NAMWSVVCA NSFVHAWMY YYA PR LLR ++ LT AQM QH VLA+ YVV++ G + C+N++TPIL GL LYLMYL+FFA FY+R Y + KA
Sbjct: 416 RLERGHNILLALTSAAMLVGIIRSCVTSGKTSSVHAMLCGAFDEEDPVFDMTAKTFFWSKAWEWVDTAILVAKGKPVSWLQYTHHASTAILTALNMVPTRNAMWSVVCALNSFVHAWMYAYYAFPRFSLLRRTKVWLTWAQMVQHMIVLASATYVVYQSRTGTE--------------CHNNTTPILAGLGLYLMYLVFFALFYRRTYLGGAKKA 616
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Match: A0A835ZBR2_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR2_9STRA) HSP 1 Score: 235 bits (599), Expect = 5.000e-67 Identity = 127/214 (59.35%), Postives = 148/214 (69.16%), Query Frame = 1
Query: 136 KASLLRFEYLHNIGLALLSAAMLVGILLSISKSGKGSTYYALVCRRFEEDALFELTAHAFFWSKIWEWGDTALLVAKGKSITWLHYTHHASTCFLTGLNMTPVYNAMWSVVCATNSFVHAWMYLYYAHPRLLRWSRRLLTLAQMAQHAFVLATGVYVV---WRRYGGADTGGNAGNGGGGLEDCYNDSTPILVGLALYLMYLLFFAAFYKRRYA 768
+ ++LR E HN+GLA LSA MLVGI+ S SGK + +AL+C+ F+ED +F TAH FFWSK WEWGDTALLVAKGK +TWLHYTHHAST LT LNM+P+YNAMWS+VCATNSFVHAWMY YY P LLR RR +T Q+ QHA VLA+ +YV+ R G D AG C N PI GL LYLMY LFF AFY + YA
Sbjct: 739 RKAVLRLENAHNMGLAALSAGMLVGIVRSCFVSGKVESLHALLCQPFQEDTVFLWTAHLFFWSKFWEWGDTALLVAKGKPVTWLHYTHHASTAVLTMLNMSPIYNAMWSIVCATNSFVHAWMYGYYWKPSLLRPLRRAITRIQILQHAGVLASALYVLRELLRPRQGDDKAMEAG--------CANSLVPIAAGLGLYLMYFLFFLAFYIQTYA 944
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Match: A0A7S3H2Y1_9STRA (Elongation of fatty acids protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H2Y1_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.910e-28 Identity = 65/155 (41.94%), Postives = 91/155 (58.71%), Query Frame = 1
Query: 70 ALASPMLYQLYVRWLGQ-MPPGAKASLLRFEYL---HNIGLALLSAAMLVGILLSISKSGKGSTYYALVCRRFEEDALFELTAHAFFWSKIWEWGDTALLVAKGKSITWLHYTHHASTCFLTGLNMTPVYNAMWSVVCATNSFVHAWMYLYYAHP 522
A ASP+LY +YV + +P +K + F L HN+GLA+ S ML+GIL +SGK ++ +A +C F + L F+ SK WEW DTA L+ K ++WL YTHH ST L N+TPV ++ + C TN+FVH +MY Y+A P
Sbjct: 20 AWASPVLYMVYVEIAKRVLPYESKENKHIFHVLRLVHNVGLAIASLVMLIGILAVSHQSGKLNSIHAALCDPFLDVESATLVGRYFYLSKYWEWVDTAFLITARKDVSWLQYTHHMSTAILVFANLTPVISSASLLACFTNTFVHVFMYFYFAFP 174
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Match: K4AK44_SETIT (Uncharacterized protein n=7 Tax=Panicoideae TaxID=147369 RepID=K4AK44_SETIT) HSP 1 Score: 72.8 bits (177), Expect = 3.820e-11 Identity = 73/238 (30.67%), Postives = 101/238 (42.44%), Query Frame = 1
Query: 112 LGQMPPGAKASLLRFEYLHNIGLALLSAAMLVGILLSISKSGKGSTYYALVCRRFEEDALFELTAHAFFW------SKIWEWGDTALLVAKGKSITWLHYTHHA---STCFLTGLNMTPVYNAMWSVVCATNSFVHAWMYLYYAHPRL-LRWSRRL---LTLAQMAQHAFVLATGVYVVWRRYGGADTGGNAGNGGGGLEDCYNDSTPILVGLALYLMYLLFFAAFYKRRYASSSGKA 786
L ++PP +L HN L LSAAM G LS + + + C F E + FFW SK++E GDT L++ + +T LH HHA + C+L ++ + TN+ VH MY YY + LRW RRL +T Q+ Q F A V ++W + GG G G +N S L ++L F A YK S GKA
Sbjct: 56 LPRLPPLPPRALRLASAAHNTVLLALSAAMAAGCALSTAATAPAPRWAWPFC--FPPGGATEASGPVFFWAHVFYLSKVYELGDTLLILLGRRPLTLLHVYHHAVVIAMCYL----WLATRQSLMPIALVTNAGVHVVMYSYYLSCSVGLRWPRRLKRAVTELQIVQFLFSFAASVVMLWLHFA---AGGCEGMAGWVFNAVFNAS--------LLALFLDFHGAAYKAAKGGSKGKA 276
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Match: I3NM07_WHEAT (ELO domain-containing protein n=8 Tax=Triticeae TaxID=147389 RepID=I3NM07_WHEAT) HSP 1 Score: 71.2 bits (173), Expect = 1.450e-10 Identity = 66/206 (32.04%), Postives = 94/206 (45.63%), Query Frame = 1
Query: 73 LASPMLYQLYVRWLGQMPPGAKASLLRFEYLHNIGLALLSAAMLVGILLSISKSGKGSTYYALVCRRFEEDALFELTAHAFFW------SKIWEWGDTALLVAKGKSITWLHYTHHA---STCFLTGLNMTPVYNAMWSVVCATNSFVHAWMYLYYAHPRL-LRWS---RRLLTLAQMAQHAFVLATGVYVVWRRYGGADTGGNAG 651
LA+ +L + L +PP A ++ LHN L LSAAM G +LS + + + C F D E + FFW SK++E GDT L++ + +T LH HHA + C+L ++ V TN+ VH MY YY L LRW +R +T Q+ Q F A V ++W + G G AG
Sbjct: 45 LATVLLLHRRILPLPSLPPRALRAV---SALHNCVLLALSAAMAAGCVLSAAATAPSPRW--AFC--FPPDGATEASGPVFFWAHVFYLSKMYELGDTLLILLARRPLTLLHVYHHALVIAMCYL----WLATRQSLMPVALVTNAAVHVVMYAYYLCCTLGLRWPPRWKRAVTELQILQFLFSFAASVVMLWFHFAGGGCEGMAG 239
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Match: A0A6G1DL09_9ORYZ (Uncharacterized protein n=2 Tax=Oryzeae TaxID=147380 RepID=A0A6G1DL09_9ORYZ) HSP 1 Score: 70.5 bits (171), Expect = 1.550e-10 Identity = 72/231 (31.17%), Postives = 104/231 (45.02%), Query Frame = 1
Query: 121 MPPGAKASLLRFEYLHNIGLALLSAAMLVGILLSISKSGKGSTYYALVCRRFEEDALFELTAHAFFW------SKIWEWGDTALLVAKGKSITWLHYTHHASTCFLTGLNMTPVYNAMWSVVCATNSFVHAWMYLYYAHPRL-LRWS---RRLLTLAQMAQHAFVLATGVYVVWRRYGGADTGGNAGNGGGGLEDCYNDSTPILVGLALYLMYLLFFAAFYKRRYASSSGK 783
+P A +L LHN L LSAAM G +LS++ + S ++A F + FFW SK++E GDT L++ + +T LH HHA + + + + M + ATN+ VH MY YY L LRW +R +T Q+ Q F A V ++WR + GG G G +N S LAL+L F+ YA++ GK
Sbjct: 20 LPAPAPRALRAVSTLHNAVLLALSAAMAAGCVLSVAATAP-SPWWAFC---FPPSGATTASGPVFFWAHVFYLSKVYELGDTLLILLGRRQLTLLHVYHHAVVIVMCYIWLATRQSLM-PIALATNATVHVVMYGYYLCCSLGLRWPPRWKRAVTELQIVQFLFSFAASVVMLWRHFA---AGGCEGMAGWVFNAVFNASL-----LALFL-------DFHGAAYAAAKGK 230
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Match: A0A0D9VXW5_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VXW5_9ORYZ) HSP 1 Score: 70.9 bits (172), Expect = 1.830e-10 Identity = 73/231 (31.60%), Postives = 105/231 (45.45%), Query Frame = 1
Query: 121 MPPGAKASLLRFEYLHNIGLALLSAAMLVGILLSISKSGKGSTYYALVCRRFEEDALFE---LTAHAFFWSKIWEWGDTALLVAKGKSITWLHYTHHA---STCFLTGLNMTPVYNAMWSVVCATNSFVHAWMYLYYAHPRL-LRWS---RRLLTLAQMAQHAFVLATGVYVVWRRYGGADTGGNAGNGGGGLEDCYNDSTPILVGLALYLMYLLFFAAFYKRRYASSSGK 783
+P +L LHN L LSAAM G +LS++ + S ++A E A AH F+ SK++E GDT L++ + +T LH HHA + C+L ++ V ATN+ VH MY YY + LRW +R +T Q+ Q F A V ++WR + GG G G +N S LAL+L F+ YA++ GK
Sbjct: 59 LPTPTPRALRAVSALHNAILLALSAAMAAGCVLSVAATSP-SRWWAFCFPPRGETATSGPVFFWAHVFYLSKVYELGDTLLIILGRRPLTLLHVYHHAVVIAMCYL----WLATRQSLMPVALATNATVHVVMYGYYLCCSVGLRWPPRWKRAVTELQIVQFLFSFAASVVMLWRHFA---AGGCEGMAGWVFNAVFNASL-----LALFL-------DFHGAAYAAAKGK 269
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Match: UPI001F5D2297 (elongation of fatty acids protein 3-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D2297) HSP 1 Score: 70.5 bits (171), Expect = 2.470e-10 Identity = 77/255 (30.20%), Postives = 113/255 (44.31%), Query Frame = 1
Query: 73 LASPMLYQLYVRWLGQMPPGAKASLLRFEYLHNIGLALLSAAMLVGILLSISKSGKGSTY-YALVCRRFEEDALFELTAHAFFWSKIWEWGDTALLVAKGKSITWLHYTHHA---STCFL---TGLNMTPVYNAMWSVVCATNSFVHAWMYLYYAHPRL-LRWS---RRLLTLAQMAQHAFVLATGVYVVWRRYGGADTGGNAGNGGGGLEDCYNDSTPILVGLALYLMYLLFFAAFYKRRYASSSGKAGKEANG 804
LA+ +L V L +PP ++ +HN+ L +SAAM G +LS + + + + AH F+ SKI+E GDT L++ + +T LH HHA + C+L T ++ PV TN+ VH MY YY L LRW +R +T Q+ Q F A V ++W + G GG G G +N S LAL+L F+ YA++ GK +NG
Sbjct: 45 LAAVLLLHRRVVPLPSLPPRVLRAV---SAVHNVVLLSVSAAMAAGCVLSTAATAPSPRWVFCFPPGATPPSGPVFYWAHVFYLSKIYELGDTLLILLGRRPLTLLHVYHHAVVIAMCYLWLATSQSLMPV-------ALVTNATVHVVMYTYYLCCTLGLRWPPRWKRAVTELQIVQFVFSFAASVVMLWFHFAG---GGCEGMAGWAFNAVFNASL-----LALFL-------DFHGAAYAAAKGKKRSSSNG 274
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Match: A0A1D6L0Y4_MAIZE (GNS1/SUR4 membrane protein family n=5 Tax=Panicoideae TaxID=147369 RepID=A0A1D6L0Y4_MAIZE) HSP 1 Score: 70.1 bits (170), Expect = 3.360e-10 Identity = 75/247 (30.36%), Postives = 107/247 (43.32%), Query Frame = 1
Query: 85 MLYQLYVRWLGQMPPGAKASLLRFEYLHNIGLALLSAAMLVGILLSISKSGKGSTYYALVCRRFEEDALFELTAHAFFW------SKIWEWGDTALLVAKGKSITWLHYTHHA---STCFLTGLNMTPVYNAMWSVVCATNSFVHAWMYLYYAHPRL-LRWS---RRLLTLAQMAQHAFVLATGVYVVWRRYGGADTGGNAGNGGGGLEDCYNDSTPILVGLALYLMYLLFFAAFYKRRYASSSGKA 786
+L +L + L +PP A +L HN L LSAAM G LS + + + C F E + FFW SK++E GDT L++ + +T LH HHA + C+L ++ V TN+ VH MY YY + LRW +R +T Q+AQ F A V ++W + GG G G +N S L ++L F A YK ++ GKA
Sbjct: 51 VLRRLVLPRLPALPPPALRAL---SAAHNAVLLALSAAMAGGCALSTAATAPAPRWAWAFC--FPPRGATEASGPVFFWAHVFYLSKVYELGDTLLILLARRPLTLLHVYHHALVVAMCYL----WLATRQSLMPVALVTNAGVHVVMYSYYLSCSVGLRWPGRWKRAVTELQIAQFLFSFAASVVMLWLHFA---AGGCEGMAGWVFNAVFNAS--------LLALFLNFHGAAYKGAAKANKGKA 277
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Match: I1GPA0_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GPA0_BRADI) HSP 1 Score: 70.1 bits (170), Expect = 3.390e-10 Identity = 80/254 (31.50%), Postives = 112/254 (44.09%), Query Frame = 1
Query: 70 ALASPMLYQLYVRWLGQMPPGAKASLLR-FEYLHNIGLALLSAAMLVGILLSISKSGKGSTYYALVCRRFEEDAL-----FELTAHAFFWSKIWEWGDTALLVAKGKSITWLHYTHHASTCFLTGLNMTPVYNAMWSVVCATNSFVHAWMYLYYAHPRL-LRWS---RRLLTLAQMAQHAFVLATGVYVVWRRYGGADTGGNAGNGGGGLEDCYNDSTPILVGLALYLMYLLFFAAFYKRRYASSSGKAGKEAN 801
A A+ Y V L + P LLR LHN L LSA M G +LS + + + + C DA AH F+ SKI+E GDT L++ + +T+LH HHA + L + + M V TN+ VH MY YY L LRW +R +T Q+ Q F A V ++W + G GG G G +N S LAL+L F+ YA+++GK K ++
Sbjct: 37 AAAAVCAYLAAVLLLHRRAPALPPRLLRAVSALHNTVLLALSATMAAGCVLSAAATAPSPRW--VFCFPPGADATPPSGPVFYWAHVFYLSKIYELGDTLLILLARRPLTFLHVYHHAVVIVMCYLWLATRQSLM-PVALVTNATVHVVMYGYYLCCSLGLRWPPRWKRAVTELQIVQFLFSFAASVVMLWFHFAG---GGCEGMAGWAFNAVFNASL-----LALFL-------DFHGAAYAAATGKKKKRSS 272 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1638.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1638.3.1 >prot_P-wetherbeei_contig1638.3.1 ID=prot_P-wetherbeei_contig1638.3.1|Name=mRNA_P-wetherbeei_contig1638.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=285bp MATGSGGVASGSPLHLTALASPMLYQLYVRWLGQMPPGAKASLLRFEYLHback to top mRNA from alignment at P-wetherbeei_contig1638:3791..4705+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1638.3.1 ID=mRNA_P-wetherbeei_contig1638.3.1|Name=mRNA_P-wetherbeei_contig1638.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=915bp|location=Sequence derived from alignment at P-wetherbeei_contig1638:3791..4705+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1638:3791..4705+ >mRNA_P-wetherbeei_contig1638.3.1 ID=mRNA_P-wetherbeei_contig1638.3.1|Name=mRNA_P-wetherbeei_contig1638.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=855bp|location=Sequence derived from alignment at P-wetherbeei_contig1638:3791..4705+ (Phaeothamnion wetherbeei SAG_119_79)back to top |