mRNA_P-wetherbeei_contig16372.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A357FFE4_9RHOB (GntR family transcriptional regulator n=4 Tax=Rhodobacterales TaxID=204455 RepID=A0A357FFE4_9RHOB) HSP 1 Score: 114 bits (285), Expect = 5.570e-29 Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 1
Query: 19 GGVDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 312
G VD +P PLYHQ+YLILR +I G + GA LP+E E S + VSRITAKRAL++LA DGLV+R RGRGT VV + PV+AN+ GL+ENLL +G
Sbjct: 22 GHVDERLPMPLYHQVYLILRNKILTGEYGFGALLPSEQETSETFGVSRITAKRALNDLAGDGLVLRERGRGTKVVFHAPTPPVKANVEGLLENLLAMG 119
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A7X2FR46_9PROT (UTRA domain-containing protein n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FR46_9PROT) HSP 1 Score: 109 bits (273), Expect = 3.110e-27 Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 1
Query: 19 GGVDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 312
GGVD PTPLYHQ++ +LR++I GA+E +LP+E ++ + VSRITAKRALDELAADGLV R R RGT V + + PV A+++GL EN++ +G
Sbjct: 14 GGVDPSNPTPLYHQLFTLLRDRIFDGAYEEDEKLPSEQQLVDLFGVSRITAKRALDELAADGLVYRARARGTRVAAQTRTRPVNASVHGLFENVMSLG 111
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A545TG17_9PROT (GntR family transcriptional regulator n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TG17_9PROT) HSP 1 Score: 108 bits (269), Expect = 1.940e-26 Identity = 52/95 (54.74%), Postives = 72/95 (75.79%), Query Frame = 1
Query: 28 DSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 312
G+ TPLYHQIYLIL+ QI G + + ARLP+E +++ + VSRITAKRA+DELAA+GLVVR R RGT V+ + S P+ +++ GL+ENL+ +G
Sbjct: 33 SQGLKTPLYHQIYLILKGQITDGVYSTDARLPSEQDLTERFGVSRITAKRAMDELAAEGLVVRERARGTRVIYQPPSAPIASSVEGLLENLIAMG 127
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A5J4ECA5_9BACT (HTH-type transcriptional repressor YvoA n=1 Tax=bacterium MnTg04 TaxID=2080454 RepID=A0A5J4ECA5_9BACT) HSP 1 Score: 105 bits (263), Expect = 8.250e-26 Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 25 VDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 312
+D PTPLYHQI+LILR++I G + + +P+E EI + VSRITAKRALDELA+ LVVRRRGRGTSV + AS PV ++ GL E+LL +G
Sbjct: 14 IDESSPTPLYHQIFLILRDRISDGTYAFESAMPSENEICRIFGVSRITAKRALDELASANLVVRRRGRGTSVSHRTASLPVHYSVEGLFEDLLAMG 109
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A553FCT5_9GAMM (GntR family transcriptional regulator n=1 Tax=Thalassomonas sp. M1454 TaxID=2594477 RepID=A0A553FCT5_9GAMM) HSP 1 Score: 104 bits (259), Expect = 2.590e-25 Identity = 51/96 (53.12%), Postives = 73/96 (76.04%), Query Frame = 1
Query: 25 VDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 312
+ S +PTPLYHQ+YL L+E+I G G ++PTE ++S A+SVSRITAKRA+DELA +G + RRRG+G+ V+ K +E V A ++GL+ENL ++G
Sbjct: 16 LKSDVPTPLYHQVYLFLKEKIHLGDIPFGEKMPTEHQLSEAFSVSRITAKRAMDELAEEGYISRRRGKGSHVIYKNRAEHVAAPLSGLLENLKVLG 111
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A3M1GDX1_9PROT (GntR family transcriptional regulator (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1GDX1_9PROT) HSP 1 Score: 99.4 bits (246), Expect = 3.540e-25 Identity = 45/77 (58.44%), Postives = 63/77 (81.82%), Query Frame = 1
Query: 10 IPAGGVDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSV 240
+P+ +DS +PTPLYHQIY+++RE+I +G + G+ +P+E E+ + VSRITAKRALDELA++GLV RRRGRGT+V
Sbjct: 13 LPSEAIDSALPTPLYHQIYVLMREKIISGVYHDGSLIPSEHELEKMFGVSRITAKRALDELASEGLVTRRRGRGTTV 89
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A2E7QJD2_9PROT (GntR family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QJD2_9PROT) HSP 1 Score: 103 bits (258), Expect = 3.570e-25 Identity = 52/92 (56.52%), Postives = 71/92 (77.17%), Query Frame = 1
Query: 37 MPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 312
M PLYHQIYLILR+++ +G F R+P+E E+ Y VSRITA+RALDELAA+GLVVR+RGRGT + ++P+E+++ GL+ENLL +G
Sbjct: 1 MRMPLYHQIYLILRQKLLSGEFAYDDRIPSEQELVEEYEVSRITARRALDELAAEGLVVRQRGRGTRARFRPPTQPLESSVEGLLENLLAMG 92
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A4P7JLN1_9GAMM (GntR family transcriptional regulator n=1 Tax=Thalassotalea sp. HSM 43 TaxID=2552945 RepID=A0A4P7JLN1_9GAMM) HSP 1 Score: 103 bits (258), Expect = 3.640e-25 Identity = 50/96 (52.08%), Postives = 73/96 (76.04%), Query Frame = 1
Query: 25 VDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 312
+ S +PTPLYHQ+YL L+E+I G G ++PTE ++S A+SVSRITAKRA+DELA +G + RRRG+G+ V+ K +E ++A ++GL+ENL +G
Sbjct: 16 LKSDVPTPLYHQVYLFLKEKIHLGEIPFGEKMPTEHQLSEAFSVSRITAKRAMDELAEEGYISRRRGKGSHVIYKHRAEQLKAPLSGLLENLKTLG 111
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A3M0CRU6_9PROT (GntR family transcriptional regulator n=1 Tax=Eilatimonas milleporae TaxID=911205 RepID=A0A3M0CRU6_9PROT) HSP 1 Score: 103 bits (258), Expect = 4.740e-25 Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 1
Query: 19 GGVDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMV 309
G V+ +PTPLYHQIY++LRE+I G + G+ + +E E+ + VSRITAKRALDELAA+GLV R+RGRGT+V K +++ GLIENLL +
Sbjct: 14 GAVNESLPTPLYHQIYVLLREKIMTGVYPDGSLIHSEHELEKMFGVSRITAKRALDELAAEGLVARQRGRGTTVTYKQPVSHPSSDMEGLIENLLTI 110
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Match: A0A523FFA8_9PROT (GntR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FFA8_9PROT) HSP 1 Score: 103 bits (258), Expect = 4.930e-25 Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 25 VDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYSVSRITAKRALDELAADGLVVRRRGRGTSVVGKVASEPVEANINGLIENLLMVG 312
VD PTPLYHQIY ILR +I + G + +E E++ AY VSRITA+RALD+LA DGLVVR+RGRGT V S P++A I G +ENLL +G
Sbjct: 14 VDGKFPTPLYHQIYSILRGKIVEREYADGDQFLSEKEVAEAYGVSRITARRALDDLAKDGLVVRKRGRGTQVTYNAPSRPLQAGIEGALENLLAMG 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16372.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16372.2.1 >prot_P-wetherbeei_contig16372.2.1 ID=prot_P-wetherbeei_contig16372.2.1|Name=mRNA_P-wetherbeei_contig16372.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp AAAIPAGGVDSGMPTPLYHQIYLILREQIRAGAFESGARLPTEAEISAAYback to top mRNA from alignment at P-wetherbeei_contig16372:1211..1522+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16372.2.1 ID=mRNA_P-wetherbeei_contig16372.2.1|Name=mRNA_P-wetherbeei_contig16372.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig16372:1211..1522+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16372:1211..1522+ >mRNA_P-wetherbeei_contig16372.2.1 ID=mRNA_P-wetherbeei_contig16372.2.1|Name=mRNA_P-wetherbeei_contig16372.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig16372:1211..1522+ (Phaeothamnion wetherbeei SAG_119_79)back to top |