mRNA_P-wetherbeei_contig16367.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A5C5ZVJ0_9BACT (Uncharacterized protein n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C5ZVJ0_9BACT) HSP 1 Score: 87.4 bits (215), Expect = 2.120e-15 Identity = 106/360 (29.44%), Postives = 154/360 (42.78%), Query Frame = 1
Query: 34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRS----------------LLKRLGDRVP--LDLMLASSDFMLRRMALVRSSP--------EQRAQMRSDPSSAVRAEV----------ISPQDFRWGLLDRSERVRSRASHALKQAGEDPRRFYLDHLES--HSAIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALARSDAKSLPG--EQLLKDPAPGVVR---EYLKVA--DLSTEKLREL---SRQPELRKVCLQSLLGRGRWEAL 969
SD++ +L +LH+NGYVR+ A+R L+ G + LR +DWV SI E A++ + + + + + L++ +L+ R + + L L + P HR V LL R GD + + ++S D ++R L R+S E + SD VR E +S ++ GL D+S +R A LK+ G D Y HL +S AL GL E G +D A L +P+A R AVR L R D KS G +Q L D + VVR + L L+ E L L + +K L LLG GRW AL
Sbjct: 118 SDIAVGSLLSLHKNGYVRQIAVRFLSDVDSGEEIRFLLLRQNDWVDSISETAQSAICDRLTGDNLVSFVSESDLLMHLLECKRRDLSK----------IVSLYIDLLIAPQHREHVNEAVNSCGKQTGRKLIGLLLCRDGDHLADVVQFGVSSHDGVVRSKCLRRASDCLPADVCTEIAERFLSDKFIPVRLEAYELSAASSPAMSTGIWKRGLFDKSRSLRETAMFYLKKDGCDVASIYRKHLSRFPNSLPALSGLVESGDEKDIALFFQCLASPYASRRAEAVRGLGRFDRKSDVGRIQQSLLDESARVVRAAHQQLSTTRNQLNPEHLFGLIDDCKNLAGKKAILHLLLGLGRWPAL 467
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A3M8B771_9BACL (HEAT repeat domain-containing protein n=2 Tax=Brevibacillus TaxID=55080 RepID=A0A3M8B771_9BACL) HSP 1 Score: 84.3 bits (207), Expect = 2.300e-14 Identity = 76/281 (27.05%), Postives = 127/281 (45.20%), Query Frame = 1
Query: 34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLL--EDLQPFLELHPSHRASVRSLLKRLGDRVP-------LDLMLASSDFMLRRMA---LVRSSPEQ-----RAQMRSDPSSAVRAEVI----------SPQDFRWGLLDRSERVRSRASHALKQAGEDPRRFYLDHLESHSA----IALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRAL 783
SD+S + +C+ HRNGYVREAA+ +LA + G+ + LR++DW+P IR +A + RP++ +H+ + +LV + + + + + + E+ + L S VR L +P + L SD +R + R+ + ++RSD +R + S ++ LLDR + +R A + LK D FY + L + A+ G+ E G + D I PFL + +A RRAAV+AL
Sbjct: 121 SDVSFIGICSFHRNGYVREAAVEMLAHQFSGKEIPFLLLRMNDWLPKIRFMAFKALKQRIRPDYVKHFLEAIYLVKHLSEYYNREKFSDFVDEIYGLFRHPENRKVLLSGFHSKAPIVRRFCFELAINLPDIEQESVISEALRQSDAWIRLQVAKHICRNYSNECLIQWLKRIRSDVFPPIRQLALQTYMEHFSEQSTKELLAALLDRHKTIREMARYYLKDKRIDFSSFYREKLNGTNERLIQAAIAGVGETGDKTDAQWIVPFLCHENARTRRAAVKAL 401
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A7Z7CGR0_9BACL (HEAT repeat n=4 Tax=Paenibacillus TaxID=44249 RepID=A0A7Z7CGR0_9BACL) HSP 1 Score: 82.4 bits (202), Expect = 9.870e-14 Identity = 84/311 (27.01%), Postives = 147/311 (47.27%), Query Frame = 1
Query: 34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAP-CFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRSLLKRLGDRVPLD-----------LMLASSDFMLRRMALVR--------SSPEQRAQMRSDPSSAVRAEVIS------PQDFRW----GLLDRSERVRSRASHALKQAGEDP-RRFYLDHLES----HSAIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALARSDAKSLPGE--QLLKDPAPGVVRE 855
+ + L++ T+H +GY+REAA+R + E D + P LRL+DWVP IR+LA+ + +PE+ + W ++ ++VE L+ + W + + + L + ++ +H S R S + ++RL R+ ++ L D +RR A + + E +M+ D ++R E ++ P+D + LLD VR A KQ + +YLD + S H A A+ GL E G + D + + ++ +R+A +R L R + S +L+DP PG+ RE
Sbjct: 104 ASATRLSVLTMHWSGYIREAAVRKM-IENDQPYTFPYLLLRLNDWVPEIRDLAKLALERKRKPEYAKLWMENI-ILVERLRICGRDLFEEWIESIHNLLRQKECRYV-IH-SARVSPDAYIRRLAFRISIEENGTDNGMIIEQALRDDDPSIRRWAAWQVDGILSGQNLKEALLRMQQDSIPSIRRESLASLATMFPEDAKEIIADRLLDPDLSVRDTARRHGKQWMKGSYAEWYLDMIWSEERGHLAAAIAGLGETGEKADAEVVFDYAQHSVVAVRKAVIRGLTRLNPSSYGPYFINMLQDPQPGISRE 410
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A8F9YHS4_9PSEU (Uncharacterized protein n=1 Tax=Amycolatopsis sp. DSM 110486 TaxID=2865832 RepID=A0A8F9YHS4_9PSEU) HSP 1 Score: 80.5 bits (197), Expect = 2.520e-13 Identity = 90/303 (29.70%), Postives = 136/303 (44.88%), Query Frame = 1
Query: 46 ELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWA-----QPVL------DFLLEDLQPFLELHPS-HRASVRSLLKRLGDRVPLDLMLASSDFMLR----RMALVRSSPEQRAQMRSDPSSAVRA---EVISPQDFRWGLLDRSERVRSRASHALKQAGEDPRRFYLDHLESHSAI--ALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALAR-----SDAKSLP-GEQLLKDPAPGVVREYLKVAD 873
+LA H GY+RE +R L +D L +R DWVP +RE+ARA VL R +D A L+ V+ R + W QP+L D L P L + H +++ + L L D + + D ++R + L R P + + VRA +++ + R L + S VRS A + ++G DP +Y + L S + + GL E GT +D +R + +R AAVR L R SD ++ G +LL DP+PGVVRE + + D
Sbjct: 49 QLAEAVCHAVGYIREPGVRRLRSSRDPEALPLLVVRCVDWVPQVREIARAAVLA------RFAQADRAGLLPLVVALSRRAVDG-WVDEHLLQPMLRSPELLDLALAS--PDLRTRRTVHESALHAGL--LSDEQLASIAMHDHDDVIRTRVGHLLLDRGDPRFVLPLLDGGAPKVRARALQLLGVETARERLAESSSLVRSMAQALVLRSGGDPAAYYREALRSGAVTRATVAGLGETGTLDDVDLVRAQFADDRPRVRVAAVRGLRRLLANPSDPRAAEYGRELLTDPSPGVVREAVALLD 340
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A268SDJ9_9BACL (Uncharacterized protein n=8 Tax=Paenibacillus TaxID=44249 RepID=A0A268SDJ9_9BACL) HSP 1 Score: 79.7 bits (195), Expect = 7.830e-13 Identity = 86/305 (28.20%), Postives = 136/305 (44.59%), Query Frame = 1
Query: 49 LALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRSLLKRLGDRVPLDL-----------MLASSDFMLRRMALVRSSP--------EQRAQMRSDPSSAVRAEVIS------PQDFRW----GLLDRSERVRSRAS-HALKQAGEDPRRFYLDHL----ESHSAIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALARSDAKSLPGEQL--LKDPAPGVVRE 855
L++ T+H +GY+REAA+R + E + LRL+DWVP IR LARA + +PE + W ++ LV + R Q + + + V L + F+ LH + R S S +++ R+ L+ L + +RR A R E M+ D ++R E ++ P D + LLD + VR A +A + +YLD + + H A A+ GL E G + D + + K+P +R+A +R L R DA S + L PG+ RE
Sbjct: 109 LSMLTMHWSGYIREAAVRRMIREDESYSFPYLLLRLNDWVPEIRHLARAALELKLKPEHAKLWMENIMLVERLRICGRDQFES-FIESVYHLLRQKECRFV-LHNA-RVSPESSIRQFAFRISLEAEGTDTSVIMEQALRDENPAIRRWAAQRVDRMLSGGKLREALLGMQLDSVPSIRREGLAVLATMYPDDAKAIIMNRLLDSNLPVRDTARRYAKRWMNVSYAEWYLDVIWGDDQQHLAAAISGLGETGDKADAEVLCEYAKHPSIAVRKAVIRGLMRLDASSYGTHFVHSLTSEQPGISRE 410
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A841H1A9_9BACT (HEAT repeat protein n=1 Tax=Longimicrobium terrae TaxID=1639882 RepID=A0A841H1A9_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 2.490e-12 Identity = 80/267 (29.96%), Postives = 117/267 (43.82%), Query Frame = 1
Query: 67 HRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLE--LHPSHRASVRSLLKRLGDRVPLDL-------MLASSDFMLRRMA--LVRSSPEQRAQ-----MRSDPSSAVRAEVIS-----PQDFRW----GLLDRSERVRSRASHALKQAGE-DPRRFYLDHLESHS---AIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRA 780
H +G+VR + LA ++DGR L P LR DWVP +R+ ARA + + + HW + LV+ + R G L + L LH RA + L D +L +L S D +RR A +V + ++ A+ +R D ++ +RA + D W GL+DRS VR A LK D FY + + + A+A+ GL E GT D + L + A +RRAAVRA
Sbjct: 106 HGDGFVRAEMVARLAEQRDGRELWPLLLRAKDWVPQVRDAARAALRDRLLAGYEEHWMRNLALVLWAGEGERADAGLAAEVMALVRASPRGEEMLTRGLHSGERAVRHAAFAALTDVGGPELAYRLETVLLRSDDVAVRRRAAAMVATLEDEDARRLHAYLRLDRAAVIRARGLELAVRVATDPEWMLREGLVDRSAMVRQTARFHLKTVAPLDVAAFYRERITADHPQLAVAVAGLGETGTAADFGILSAQLNHRSAAVRRAAVRA 372
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A837KE24_9BACL (Uncharacterized protein n=3 Tax=Brevibacillus TaxID=55080 RepID=A0A837KE24_9BACL) HSP 1 Score: 77.8 bits (190), Expect = 3.460e-12 Identity = 77/291 (26.46%), Postives = 130/291 (44.67%), Query Frame = 1
Query: 34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRS-------LLKRLGDRVPLDLMLASSD-----FMLRRMALVRSSPEQRA--------------QMRSDPSSAVRAEVISPQDFRW----------GLLDRSERVRSRASHALKQAGEDPRRFYLDHL---ESHSA-IALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALA 786
SDL+ + +C+ HRNGYVREAA+ +L + G L +RL+DW P IR LA RP + +H+ + L+ + A + + LE++ HP++R +RS +++R + ++L+ D ++++ AL+R + ++R D ++R + R+ LLD + +R LK + FY + L E H IA+ G+ E G R D I PFL++ + ++RAAV+ALA
Sbjct: 111 SDLNFIGICSFHRNGYVREAAIEVLLKQVTGAELPFLLIRLNDWQPKIRYLAFMACKLRFRPNYVKHFLESIFLL--------KHLSAYYNREKFSDFLEEIDAMFR-HPNNRDVLRSGFHSKDPVVRRFCFDLAINLLDIDPDEVIAEALIQKDALIRLQTVRHMCKQDENERLRKWLDRIRRDVFPSIRQLALQAYVDRFPEESTDALLAALLDGHKSIREMTRFYLKDKNINFATFYREKLVDTEEHVIPIAIVGVGETGVRADDQWILPFLRHENERIQRAAVKALA 392
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A3M8CS91_9BACL (Uncharacterized protein n=1 Tax=Brevibacillus panacihumi TaxID=497735 RepID=A0A3M8CS91_9BACL) HSP 1 Score: 77.8 bits (190), Expect = 3.520e-12 Identity = 72/282 (25.53%), Postives = 127/282 (45.04%), Query Frame = 1
Query: 34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLL--EDLQPFLELHPSHRASVRSLLKRLGDRVP-------LDLMLASSDFMLRRMALVRSSPEQRAQM---------RSDPSSAVRAEVI----------SPQDFRWGLLDRSERVRSRASHALKQAGEDPRRFYLDHLESHSA----IALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRAL 783
SD+S + +C+ HRNGYVREAA+ +L+ + G + FLRL+DW P IR LA + ++ +++ + +L+ + + + + + ++ L S +VR +P ++ L SD ++R + +V+ + + + RSD +R V+ S ++ LLDR + +R A + LK + FY + L+ +A+ GL E G + D + PFL + +A L RAAV+AL
Sbjct: 122 SDVSFIGICSFHRNGYVREAAIEVLSKQASGADIPFLFLRLNDWQPKIRFLAFKAIKQKLHSDYVKYYLEAIYLIKHLSDYYTREKFSDLVDEIYEVFRHPQNRDVLLSGFHSKDPAVRRFCFETAINLPDMDQKSVIEEALCQSDALIR-LQIVKHICKSYSNVCLNPWLKRFRSDVFPPIRQLVLQAYMDRFPEQSTEELLAALLDRHKTIREMARYYLKDQLINYPSFYRETLKETDKGLIQVAIVGLGETGEKADAQWVTPFLCHVNAQLHRAAVKAL 402
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A542PW75_9BACL (Uncharacterized protein n=3 Tax=Brevibacillus TaxID=55080 RepID=A0A542PW75_9BACL) HSP 1 Score: 77.0 bits (188), Expect = 6.230e-12 Identity = 80/292 (27.40%), Postives = 127/292 (43.49%), Query Frame = 1
Query: 34 SDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRS---------------LLKRLGDRVPLDLM---LASSDFMLRRMALVRSSPEQRA---------QMRSDPSSAVRAEVISPQDFRW----------GLLDRSERVRSRASHALKQAGEDPRRFYLDHL----ESHSAIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALA 786
SDL + +C+ HRNGYVREAA+ +L + G + +RL+DW P IR LA RP + +H+ + L+ + A + + LE++ HP++R VRS L L D P +++ L D ++R + +V+ +Q Q+R D +R + R+ LLD + +R A LK D FY + L E IA+ G+ E G + + I PFL++ + ++RAAV+ALA
Sbjct: 111 SDLCFIGICSFHRNGYVREAAVEMLLKQVTGAEIPFLLIRLNDWQPKIRYLAFKACKLRFRPNYVKHFLESVFLL--------KHLSAYYNREKFSDFLEEIDAMFR-HPNNRDVVRSGFHSKDPVVRRFCFDLANNLHDIDPDEVIAEALIQKDALIR-LQMVKHMCKQDENDRLQRWLDQIRRDVFPPIRQLALQAYVDRFPEESTDALLAALLDGHKSIREMARFYLKDKKIDFAAFYREKLVGTEEQVIPIAIVGVGETGVKANDQWILPFLRHENERIQRAAVKALA 392
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Match: A0A5C5WEE8_9BACT (HEAT repeat protein n=1 Tax=Botrimarina hoheduenensis TaxID=2528000 RepID=A0A5C5WEE8_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 6.350e-12 Identity = 96/363 (26.45%), Postives = 150/363 (41.32%), Query Frame = 1
Query: 49 LALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDWVPSIRELARARVLNYCRPEFRRHWSDHAHLVVEVLQRPRTQMGAPWAQPVLDFLLEDLQPFLELHPSHRASVRSLLKRLGDRVPLD-------------------------------------LMLASSDFMLRRMALVRSSPEQR-AQMRSDPSSAVRAEVISPQDFRWGLLDRSERVRSRASHALKQAG-EDPRRFYLDHL--ESHSAIALRGLREWGTREDTAAIRPFLKNPHAGLRRAAVRALARSDAKSLPGEQL-------LKDPAPGVVREYLK-----VADLSTEKLRE-LSRQP--ELRKVCLQSLLGRGRWEAL 969
L L + HRNGYVRE A+++LA DG + +R +DWV +I LA+ V + ++W ++ LV + + R + + D L L P H +RSL+ GDR+ + L LA+ ++ R+ +P +R A + SS AE++ ++ DRS VR A LK G + R YL L E + AL GL E +D +R + + RR A+ LAR L G+Q+ L D +PGV ++ + A + E+L L+R P R+ CL+ G+W++L
Sbjct: 127 LGLLSFHRNGYVREEAVKLLAQMSDGAEVPYLLIRQNDWVTAISRLAQRAVKERLGYSYSQYWFNNLDLVAHLPEFGRNDLSH-----ITDATFSQL-----LEPEHDGRLRSLIAS-GDRITIRRFVKRSFELPGSHSERVAKLGIDAEDAVVRLWSARKLLTLATDSPLIDRLLSDSFAPVRREAYIAWAASSRAEAEMV----WKQAAYDRSAGVRDLARFELKTQGLTNIREQYLASLQEEPENLAALMGLSECCEDQDAQLLREYCSHDRPRFRRVAISGLAR-----LLGDQVIHELVGWLADESPGVAKQAARSLQAHAAIVEGEQLWSVLTRSPTDNGRRTCLRLFYEMGKWKSL 469 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16367.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16367.1.1 >prot_P-wetherbeei_contig16367.1.1 ID=prot_P-wetherbeei_contig16367.1.1|Name=mRNA_P-wetherbeei_contig16367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp MSAYGIPSDLSELALCTLHRNGYVREAALRILAFEQDGRWLAPCFLRLSDback to top mRNA from alignment at P-wetherbeei_contig16367:308..1288+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16367.1.1 ID=mRNA_P-wetherbeei_contig16367.1.1|Name=mRNA_P-wetherbeei_contig16367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig16367:308..1288+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16367:308..1288+ >mRNA_P-wetherbeei_contig16367.1.1 ID=mRNA_P-wetherbeei_contig16367.1.1|Name=mRNA_P-wetherbeei_contig16367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig16367:308..1288+ (Phaeothamnion wetherbeei SAG_119_79)back to top |