prot_P-wetherbeei_contig9992.3.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9992.3.2
Unique Nameprot_P-wetherbeei_contig9992.3.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length171
Homology
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Match: D8LBT7_ECTSI (RBEL1, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBT7_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.010e-48
Identity = 96/165 (58.18%), Postives = 116/165 (70.30%), Query Frame = 0
Query:    7 GVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTTINWSVRSGGEEAVKVEVWDVVDRGFARSANDRRLALGPGETLEDRVASLRPPTPGTIVGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYLVDGLAEVPGDVSVVVLLNFKD 171
            G QYNMKV+IRG +G GK+TLW+RLQGLP+ ++Y PTPEIQTTTIN  V  G  + VKVEVWDVVD+G A+    R   +  GE LED VA L PP  G+     GGGG+S AVLDA +V+VY+ A A IF+VDP  PET   +  GLAE P D+  VVLLNF+D
Sbjct:   61 GAQYNMKVVIRGERGVGKSTLWRRLQGLPYEEKYTPTPEIQTTTINNWVYRGSRDVVKVEVWDVVDKGLAQGGKGR---VPEGEDLEDVVAGL-PPDHGS-----GGGGRSLAVLDAGVVNVYQGASAIIFVVDPYRPETLDKVEKGLAEAPVDLPTVVLLNFRD 216          
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Match: A0A2D4BHF7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHF7_PYTIN)

HSP 1 Score: 135 bits (341), Expect = 1.710e-34
Identity = 72/179 (40.22%), Postives = 102/179 (56.98%), Query Frame = 0
Query:    1 RKRLRAGVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTTINWSVRSGGEEAVKVEVWDVVDRGF--------ARSANDRRLALGPGETLEDRVASLRPPTPGTIVGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYLVDGLAEVPGDVSVVVLLNFKD 171
            RKR+R G+ YNMK++IRG +GTGKT+L+ RL+G P   E+  TP++Q+ TINWS R+  EE+VK EVWDVVDRGF          +A++       G  +   + +   P   T       G    A +DAS VDVY +    +F++D   P T  Y+   L +VP  +  +VL NF+D
Sbjct:    6 RKRVRGGITYNMKIIIRGDRGTGKTSLFHRLKGEPIPVEHAATPQLQSATINWSYRANSEESVKCEVWDVVDRGFHPGQHDPQGSTASENENPFERGALVGSNLVATPGPAAATTTTN---GAHVVATVDASTVDVYHETHGVVFLLDVTKPHTLEYVRQHLEKVPVHIPTLVLGNFRD 181          
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Match: A0A8K1FQ06_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQ06_PYTOL)

HSP 1 Score: 137 bits (346), Expect = 1.800e-34
Identity = 72/171 (42.11%), Postives = 102/171 (59.65%), Query Frame = 0
Query:    1 RKRLRAGVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTTINWSVRSGGEEAVKVEVWDVVDRGFARSANDRRLALGPGETLEDRVASLRPPTPGTIVGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYLVDGLAEVPGDVSVVVLLNFKD 171
            RKR+R G+ YNMK+++RG +GTGKT+L+QRL+G P    + PTP++Q+ TINWS R   EE+VK EVWDVVD+GF    +D   A G     E   A+  P    ++      G    A +DA+ VDVY +    +F++D   P T  Y+   L +VP  +  +VL NF+D
Sbjct:   70 RKRVRGGITYNMKIVLRGDRGTGKTSLFQRLKGEPIPTTHAPTPQLQSATINWSYRVNSEESVKCEVWDVVDKGFHPGQSD---ANGQEPATE---ANANPFEAASLASNATNGAHLMATVDATTVDVYHETHGVVFLLDVTKPHTLEYVRQQLEKVPVHIPTLVLGNFRD 234          
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Match: A0A3F2RV77_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RV77_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.800e-34
Identity = 78/185 (42.16%), Postives = 103/185 (55.68%), Query Frame = 0
Query:    1 RKRLRAGVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTTINWSVRSGGEEAVKVEVWDVVDRGFARSANDRRLALGPGETLEDRVASLRPPTPGTI--------------VGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYLVDGLAEVPGDVSVVVLLNFKD 171
            R+R+R GV YNMK+++RGAKGTGKT+L+QRLQG P  + +  TPE+Q+ TINWS R+  EE VK EVWDVVDRGF           G      D V      + G++              V     G  S A++DAS VDVY +A   IF++D    +T  Y+   L  VP  +  +VL NF+D
Sbjct:   83 RRRVRGGVTYNMKLLLRGAKGTGKTSLFQRLQGEPIPETHQSTPELQSATINWSFRTNLEENVKCEVWDVVDRGFVIQVGTEETVNGSAAVSADSVEQGGLQSGGSLSAEAXXXXXXXXXTVSSMSNGMHSVAIVDASTVDVYHEAHGVIFLLDVTKWDTLEYVKQQLDNVPVHIPTLVLGNFRD 267          
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Match: A0A6G0QH23_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QH23_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.170e-33
Identity = 75/171 (43.86%), Postives = 102/171 (59.65%), Query Frame = 0
Query:    1 RKRLRAGVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTTINWSVRSGGEEAVKVEVWDVVDRGFARSANDRRLALGPGETLEDRVASLRPPTPGTIVGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYLVDGLAEVPGDVSVVVLLNFKD 171
            R+R+R G+ YNMK++IRGA+GTGKT+L+QRLQG P    + PTP++Q  TI+WS R   EE VK EVWDVVDRGF  +           + +E  VA+      GT          + AV+DAS VDVY++A   IF++D    +T  Y+   L  VP  +  +VL NF+D
Sbjct:   80 RRRVRGGITYNMKLLIRGARGTGKTSLFQRLQGQPIPDTHQPTPQLQAATISWSFRQHLEENVKCEVWDVVDRGFVPADAAEGADGLSAQAVEAVVAAAAAVQNGT---------HAVAVVDASTVDVYQEAHGVIFLLDVTKWDTLEYVKQQLDSVPVHIPTLVLGNFRD 241          
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Match: A0A225W6K9_9STRA (GTP-binding protein Parf n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W6K9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.030e-33
Identity = 72/178 (40.45%), Postives = 102/178 (57.30%), Query Frame = 0
Query:    1 RKRLRAGVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTTINWSVRSGGEEAVKVEVWDVVDRGF-------ARSANDRRLALGPGETLEDRVASLRPPTPGTIVGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYLVDGLAEVPGDVSVVVLLNFKD 171
            R+R+R G+ YNMK+++RGAKGTGKT+L+ RL+G P  + +  TP++Q+ TINWS R   EE VK EVWDVVD+GF       A++ +     L  G +L              +  G      S A++DAS VDVY +A   IF++D    +T  Y+   L  VP  +  +VL NF+D
Sbjct:   88 RRRVRGGITYNMKLLLRGAKGTGKTSLFHRLKGEPIPETHQSTPQLQSATINWSFRQNSEENVKCEVWDVVDKGFVPVSEDSAQTESAEHGGLQSGGSLSAEXXXXXXXXXXAMQNGT----HSMAIVDASTVDVYHEAHGVIFLLDVTKWDTLEYVKQQLDNVPVHIPTLVLGNFRD 261          
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Match: A0A0P1AR12_PLAHL (Gtp-binding protein parf n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AR12_PLAHL)

HSP 1 Score: 134 bits (338), Expect = 2.160e-33
Identity = 75/178 (42.13%), Postives = 107/178 (60.11%), Query Frame = 0
Query:    1 RKRLRAGVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTTINWSVRSGGEEAVKVEVWDVVDRGFAR------SANDRRL-ALGPGETLEDRVASLRPPTPGTIVGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYLVDGLAEVPGDVSVVVLLNFKD 171
            R+R+R G+ YNMK++IRGAKG+GKT+L+QRL+G P  + +  TP++Q+ TINWS R   E+ +K EVWDVVDRGF +      +  D RL      +  E+  +S R    GT       G  + A++DAS VDVY +A   IF++D    +T  Y+   L  VP  +  +VL NF+D
Sbjct:   83 RRRVRGGITYNMKLLIRGAKGSGKTSLFQRLKGEPIPETHQSTPQLQSATINWSYRQNSEDNIKCEVWDVVDRGFKQLETEDETKEDSRLHEFSDAKRAEE--SSKRLSVEGTAAARMHNGTHAVAIVDASTVDVYHEAHGVIFLLDITKWDTLEYVKQQLDNVPVHIPTLVLGNFRD 258          
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Match: A0A2D4CJ31_PYTIN (GTP-binding protein Parf n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJ31_PYTIN)

HSP 1 Score: 134 bits (336), Expect = 3.670e-33
Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = 0
Query:    1 RKRLRAGVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTTINWSVRSGGEEAVKVEVWDVVDRGF--------ARSANDRRLALGPGETLEDRVASLRP-PTPGTIVGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYLVDGLAEVPGDVSVVVLLNFKD 171
            RKR+R G+ YNMK++IRG +GTGKT+L+ RL+G P   E+  TP++Q+ TINWS R+  EE+VK EVWDVVDRGF          +A +       G  +   + +  P P   T       G    A +DAS VDVY +    +F++D   P T  Y+   L +VP  +  +VL NF+D
Sbjct:  168 RKRVRGGITYNMKIIIRGDRGTGKTSLFHRLKGEPIPVEHAATPQLQSATINWSYRANSEESVKCEVWDVVDRGFHPGQHDPQGSTATENENPFERGALVGSNLVAAAPGPAAATTTMN---GAHVVATVDASTVDVYHETHGVVFLLDVTRPHTLEYVRQHLEKVPVHIPTLVLGNFRD 344          
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Match: Q3YEC7-4 (Isoform 4 of Rab-like protein 6 n=3 Tax=Boreoeutheria TaxID=1437010 RepID=Q3YEC7-4)

HSP 1 Score: 126 bits (317), Expect = 6.970e-33
Identity = 69/170 (40.59%), Postives = 93/170 (54.71%), Query Frame = 0
Query:    2 KRLRAGVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTTINWSVRSGGEEAVKVEVWDVVDRGFARSANDRRLALGPGETLEDRVASLRPPTPGTIVGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYLVDGLAEVPGDVSVVVLLNFKD 171
            +R   GVQYNMK++IRG + TGKT LW RLQG PF +EY+PT EIQ T+I+WS ++  ++ VKVEVWDVVD+G  +   D        +  E  +A                       LDA  +DVYK+    + M D     TF Y++  L +VP  V V VL N++D
Sbjct:   34 RRFAKGVQYNMKIVIRGDRNTGKTALWHRLQGRPFVEEYIPTQEIQVTSIHWSYKTT-DDIVKVEVWDVVDKGKCKKRGDGLKMENDPQEAESEMA-----------------------LDAEFLDVYKNCNGVVMMFDITKQWTFNYILRELPKVPTHVPVCVLGNYRD 179          
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Match: Q3YEC7-5 (Isoform 5 of Rab-like protein 6 n=5 Tax=Amniota TaxID=32524 RepID=Q3YEC7-5)

HSP 1 Score: 126 bits (317), Expect = 7.140e-33
Identity = 69/170 (40.59%), Postives = 93/170 (54.71%), Query Frame = 0
Query:    2 KRLRAGVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTTINWSVRSGGEEAVKVEVWDVVDRGFARSANDRRLALGPGETLEDRVASLRPPTPGTIVGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYLVDGLAEVPGDVSVVVLLNFKD 171
            +R   GVQYNMK++IRG + TGKT LW RLQG PF +EY+PT EIQ T+I+WS ++  ++ VKVEVWDVVD+G  +   D        +  E  +A                       LDA  +DVYK+    + M D     TF Y++  L +VP  V V VL N++D
Sbjct:   34 RRFAKGVQYNMKIVIRGDRNTGKTALWHRLQGRPFVEEYIPTQEIQVTSIHWSYKTT-DDIVKVEVWDVVDKGKCKKRGDGLKMENDPQEAESEMA-----------------------LDAEFLDVYKNCNGVVMMFDITKQWTFNYILRELPKVPTHVPVCVLGNYRD 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9992.3.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBT7_ECTSI1.010e-4858.18RBEL1, Ras superfamily GTPase n=2 Tax=Ectocarpus T... [more]
A0A2D4BHF7_PYTIN1.710e-3440.22Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1FQ06_PYTOL1.800e-3442.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RV77_9STRA1.800e-3442.16Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A6G0QH23_9STRA1.170e-3343.86Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A225W6K9_9STRA2.030e-3340.45GTP-binding protein Parf n=1 Tax=Phytophthora mega... [more]
A0A0P1AR12_PLAHL2.160e-3342.13Gtp-binding protein parf n=1 Tax=Plasmopara halste... [more]
A0A2D4CJ31_PYTIN3.670e-3340.56GTP-binding protein Parf n=1 Tax=Pythium insidiosu... [more]
Q3YEC7-46.970e-3340.59Isoform 4 of Rab-like protein 6 n=3 Tax=Boreoeuthe... [more]
Q3YEC7-57.140e-3340.59Isoform 5 of Rab-like protein 6 n=5 Tax=Amniota Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF08477Roccoord: 13..70
e-value: 3.1E-6
score: 27.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 5..171
e-value: 7.3E-19
score: 69.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..168
IPR040385Rab-like protein 6PANTHERPTHR14932RAS GTPASE-RELATEDcoord: 1..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9992contigP-wetherbeei_contig9992:1276..2410 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9992.3.2mRNA_P-wetherbeei_contig9992.3.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9992 1276..2410 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9992.3.2 ID=prot_P-wetherbeei_contig9992.3.2|Name=mRNA_P-wetherbeei_contig9992.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
RKRLRAGVQYNMKVMIRGAKGTGKTTLWQRLQGLPFSQEYVPTPEIQTTT
INWSVRSGGEEAVKVEVWDVVDRGFARSANDRRLALGPGETLEDRVASLR
PPTPGTIVGGPGGGGQSFAVLDASMVDVYKDAQAAIFMVDPRDPETFTYL
VDGLAEVPGDVSVVVLLNFKD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR040385RABL6