prot_P-wetherbeei_contig9959.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9959.1.1
Unique Nameprot_P-wetherbeei_contig9959.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length48
Homology
BLAST of mRNA_P-wetherbeei_contig9959.1.1 vs. uniprot
Match: D7FL11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL11_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.260e-7
Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    6 RVWFPNMFMTLISALPTKRTPECRFRVPPRMTKWDIKEYLLK 47
            R WFPNM M +IS     R  +  F++ P+MTKW++KEYL K
Sbjct:    4 RSWFPNMVMAMISGPSRSRPAQASFKIQPKMTKWEVKEYLTK 45          
BLAST of mRNA_P-wetherbeei_contig9959.1.1 vs. uniprot
Match: A0A7S3HDG0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDG0_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 5.280e-6
Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    6 RVWFPNMFMTLISALPTKRTPECRFRVPPRMTKWDIKEYLLK 47
            RV+FP+MFM LI+  P K  P+    VPP MTK +I EYL K
Sbjct:    8 RVFFPSMFMRLITWKPKKTPPQALLHVPPSMTKHEISEYLTK 49          
BLAST of mRNA_P-wetherbeei_contig9959.1.1 vs. uniprot
Match: A0A835YVT8_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT8_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 1.620e-5
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    8 WFPNMFMTLISALPTKRTPE-CRFRVPPRMTKWDIKEYLLKA 48
            WFP+ FM L++ +PT+  P+   FRV P+MTK ++KEYLLK 
Sbjct:    6 WFPSFFMQLVT-MPTRGRPQQAAFRVSPKMTKLEVKEYLLKV 46          
BLAST of mRNA_P-wetherbeei_contig9959.1.1 vs. uniprot
Match: A0A7S2W937_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W937_9STRA)

HSP 1 Score: 46.2 bits (108), Expect = 6.940e-5
Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    8 WFPNMFMTLIS---ALPTKRTPECRFRVPPRMTKWDIKEYLLK 47
            +FPNMFMTL+S   A    + P   FRVPP MTK +IKEYL K
Sbjct:   34 FFPNMFMTLLSVRNAGSKTKAPLAIFRVPPAMTKLEIKEYLTK 76          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9959.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FL11_ECTSI1.260e-750.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3HDG0_9STRA5.280e-654.76Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A835YVT8_9STRA1.620e-552.38Ribosomal protein L23/L15e core domain-containing ... [more]
A0A7S2W937_9STRA6.940e-558.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 2..48
e-value: 3.2E-9
score: 39.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9959contigP-wetherbeei_contig9959:369..512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9959.1.1mRNA_P-wetherbeei_contig9959.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9959 369..512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9959.1.1 ID=prot_P-wetherbeei_contig9959.1.1|Name=mRNA_P-wetherbeei_contig9959.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=48bp
MPSSPRVWFPNMFMTLISALPTKRTPECRFRVPPRMTKWDIKEYLLKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf