prot_P-wetherbeei_contig9928.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9928.1.1
Unique Nameprot_P-wetherbeei_contig9928.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length97
Homology
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Match: T0PYB2_SAPDV (RING-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PYB2_SAPDV)

HSP 1 Score: 92.4 bits (228), Expect = 8.080e-20
Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    2 HGLLMFSVDADMRSSFSMALHRQPVRDAACQPGSDFCATVAFDRRLNVVDTRARTAVLEYELPAPGWSCTWSGTDAFTLFCGLGDGTVRLFDLRST 97
            HGLL  S   D+    S+ LH+ PVRD A        AT AFD +L +  T++ T VL+Y LP PGWSCTW  T+ F ++CG  +G + +FD+R T
Sbjct:  221 HGLLQVST-VDVHHRVSIPLHKSPVRDLAFSHDDALVATTAFDAKLLLTSTKSHTCVLKYNLPFPGWSCTWDATNPFLVYCGHHNGQISVFDIRRT 315          
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Match: A0A1V9ZS64_9STRA (E3 ubiquitin-protein ligase RFWD3 isoform X1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS64_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.450e-16
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   12 DMRSSFSMALHRQPVRDAACQPGSDFCATVAFDRRLNVVDTRARTAVLEYELPAPGWSCTWSGTDAFTLFCGLGDGTVRLFDLRST 97
            D+    ++ LH+ PVRD +        AT AFD +L+   T++ ++VL Y+LP PGWSCTW  ++ + +FCG  +G + +FD+R T
Sbjct:  211 DVHHRVAVPLHKSPVRDLSISHDDALVATTAFDAKLHFTSTKSHSSVLRYDLPFPGWSCTWDVSNPYRVFCGHHNGQISVFDIRRT 296          
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Match: A0A6A3VVD2_9STRA (RING-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3VVD2_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.430e-13
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 0
Query:    2 HGLLMFSVDADMRSSFSMALHRQPVRDAACQPGSDFCATVAFDRRLNVVDTRARTAVLEYELPA---PGWSCTWSGTDAFTLFCGLGDGTVRLFDLR 95
            HG+L+  V  D R    + +H   VRD A  P      TVAFD +L V   R + AV++ ELP     GWSC++S +D + +FCG  DGTV  +D+R
Sbjct:  394 HGVLLL-VAQDPRRRIQVPVHTSDVRDLAIHPTGRSVLTVAFDGKLAVTSIRDQKAVVQVELPPGRRQGWSCSFSESDPYAMFCGFQDGTVAKYDMR 489          
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Match: A0A433PVQ6_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PVQ6_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 1.840e-13
Identity = 38/97 (39.18%), Postives = 57/97 (58.76%), Query Frame = 0
Query:    3 GLLMFSVDADMRSSFSMALHRQPVRDAACQP-GSDFCATVAFDRRLNVVDTRARTAVLE-YELPAPGWSCTWSGTDAFTLFCGLGDGTVRLFDLRST 97
            GLL  S+  +  S   + +H + VRD  C P GS    T + D+ L +  T    ++++ +EL +PGWSC+W   D   +FCGL +GTV +FD+RST
Sbjct:  154 GLLKISL-RETSSQEYVPVHCKSVRDVQCSPTGSGLILTTSLDKTLKLTSTVGSNSIVQSFELDSPGWSCSWKDDDTNYMFCGLANGTVLMFDIRST 249          
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Match: A0A8K1FG87_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG87_PYTOL)

HSP 1 Score: 73.9 bits (180), Expect = 2.660e-13
Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 0
Query:    2 HGLLMFSVDADMRSSFSMALHRQPVRDAACQPGSDFCATVAFDRRLNVVDTRARTAVLEYELPAP---GWSCTWSGTDAFTLFCGLGDGTVRLFDLR 95
            +G++  S  AD R +  +  H+ PVRD       +F  +VAFD +L V + R+ +  L+Y LP     GWSC++S +D F ++CG  DGTV  +D+R
Sbjct:  356 YGIVKLST-ADSRHAVRIPAHQSPVRDLRLSVNEEFALSVAFDGKLVVTNLRSDSVALQYALPQTKRQGWSCSFSKSDPFAMYCGFFDGTVCKYDMR 451          
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Match: A0A329SP13_9STRA (RING-type domain-containing protein n=2 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SP13_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.090e-11
Identity = 35/97 (36.08%), Postives = 51/97 (52.58%), Query Frame = 0
Query:    2 HGLLMFSVDADMRSSFSMALHRQPVRDAACQPGSDFCATVAFDRRLNVVDTRARTAVLEYELPA---PGWSCTWSGTDAFTLFCGLGDGTVRLFDLR 95
            HG+LM S   D      + +H   VRD +  P   F  TVAFD +L +   + +   L+  LP     GWSCT+S +D + ++CG  DG+V  +D R
Sbjct:  364 HGILMLS-SQDPTLGIRLPVHSSDVRDISIHPSEKFVLTVAFDGKLAMTSLQDKKVALQIVLPPGRRQGWSCTFSESDPYAMYCGFQDGSVAKYDYR 459          
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Match: A0A0P1B1N0_PLAHL (RING-finger-containing E3 ubiquitin ligase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1N0_PLAHL)

HSP 1 Score: 66.2 bits (160), Expect = 1.350e-10
Identity = 35/97 (36.08%), Postives = 50/97 (51.55%), Query Frame = 0
Query:    2 HGLLMFSVDADMRSSFSMALHRQPVRDAACQPGSDFCATVAFDRRLNVVDTRARTAVLEYELP---APGWSCTWSGTDAFTLFCGLGDGTVRLFDLR 95
            HGLL+ S     R    +A+H   VRD        F  TVAFD ++ +     +  VL+  LP     GWSCT+S +D + ++CG  DG+V  +D R
Sbjct:  337 HGLLILSCQNPARGE-RLAVHNSEVRDICIHSSEAFALTVAFDGKMAMTCLNDQKVVLQIMLPNGRRQGWSCTFSASDPYAMYCGFQDGSVAKYDYR 432          
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Match: W2LLF1_PHYPR (RING-type domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2LLF1_PHYPR)

HSP 1 Score: 63.9 bits (154), Expect = 8.770e-10
Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 0
Query:    2 HGLLMFSVDADMRSSFSMALHRQPVRDAACQPGSDFCATVAFDRRLNVVDTRARTAVLEYELPA---PGWSCTWSGTDAFTLFCGLGDGTVRLFDLR 95
            +G+LM S   D      + +H   VRD +      F  TVAFD +L +   + +   L+  LP+    GWSCT+S +D + ++CG  DG+V  +D R
Sbjct:  355 YGILMLS-SQDPTLGVRLPVHSSDVRDISIHSSEKFVLTVAFDGKLAMTSLQDKKVALQIVLPSGRRQGWSCTFSDSDPYAMYCGFQDGSVAKYDYR 450          
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Match: UPI001FB1018B (E3 ubiquitin-protein ligase RFWD3-like isoform X1 n=3 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB1018B)

HSP 1 Score: 59.3 bits (142), Expect = 3.680e-8
Identity = 24/89 (26.97%), Postives = 46/89 (51.69%), Query Frame = 0
Query:    9 VDADMRSSFSMALHRQPVRDAACQPGSDFCATVAFDRRLNVVDTRARTAVLEYELPAPGWSCTWSGTDAFTLFCGLGDGTVRLFDLRST 97
            VD + +    +  + + ++D    P        +  ++L+V+ T +   VL Y+LPA  WSC+W    +  ++ GL +G + +FD+R T
Sbjct:  315 VDPNAKEDIELLANTKAIKDLHLSPDGKLVLLASLGKKLSVISTDSNNIVLNYDLPAAAWSCSWDVCASQYIYAGLQNGAMLMFDVRQT 403          
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Match: K4A7N4_SETIT (RING-type domain-containing protein n=5 Tax=Paniceae TaxID=147428 RepID=K4A7N4_SETIT)

HSP 1 Score: 58.9 bits (141), Expect = 4.990e-8
Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 0
Query:   26 VRDAACQPGSDFCATVA-FDRRLNVVDTRARTAVLEYELPAPGWSCTWSGTDAFTLFCGLGDGTVRLFDLRST 97
            +RD    PG   CA  A   R+L++        VL+Y+LPAPGWSC+   T    L+ GL +G + +FD+R T
Sbjct:  293 IRDICILPGG--CAVFASLGRKLSLFSVATNNVVLQYDLPAPGWSCSGDHTSPTHLYAGLQNGMILVFDIRQT 363          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9928.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
T0PYB2_SAPDV8.080e-2044.79RING-type domain-containing protein n=2 Tax=Saprol... [more]
A0A1V9ZS64_9STRA1.450e-1639.53E3 ubiquitin-protein ligase RFWD3 isoform X1 n=1 T... [more]
A0A6A3VVD2_9STRA1.430e-1341.24RING-type domain-containing protein n=9 Tax=Phytop... [more]
A0A433PVQ6_9FUNG1.840e-1339.18WD40-repeat-containing domain protein n=1 Tax=Endo... [more]
A0A8K1FG87_PYTOL2.660e-1338.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329SP13_9STRA2.090e-1136.08RING-type domain-containing protein n=2 Tax=Phytop... [more]
A0A0P1B1N0_PLAHL1.350e-1036.08RING-finger-containing E3 ubiquitin ligase n=1 Tax... [more]
W2LLF1_PHYPR8.770e-1034.02RING-type domain-containing protein n=11 Tax=Phyto... [more]
UPI001FB1018B3.680e-826.97E3 ubiquitin-protein ligase RFWD3-like isoform X1 ... [more]
K4A7N4_SETIT4.990e-839.73RING-type domain-containing protein n=5 Tax=Panice... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 56..93
e-value: 1.9
score: 15.2
coord: 12..51
e-value: 2.9
score: 14.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 7..97
e-value: 2.9E-11
score: 45.0
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 12..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9928contigP-wetherbeei_contig9928:1518..2113 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9928.1.1mRNA_P-wetherbeei_contig9928.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9928 1518..2119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9928.1.1 ID=prot_P-wetherbeei_contig9928.1.1|Name=mRNA_P-wetherbeei_contig9928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=97bp
MHGLLMFSVDADMRSSFSMALHRQPVRDAACQPGSDFCATVAFDRRLNVV
DTRARTAVLEYELPAPGWSCTWSGTDAFTLFCGLGDGTVRLFDLRST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf