prot_P-wetherbeei_contig9921.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9921.1.1
Unique Nameprot_P-wetherbeei_contig9921.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length153
Homology
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: D8LTV2_ECTSI ((R)-citramalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV2_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 1.280e-68
Identity = 114/149 (76.51%), Postives = 126/149 (84.56%), Query Frame = 0
Query:    5 KTVQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 153
            +TV++YDTTLRDGTQMEGIS SV DKLKI  +L  FGMHYIEGGWPGSNPKD EFFERAR++LP E+W R+VAFGSTRRK  ACA D QL +L++AGT CVTIVAKAWDLHVD ILEV REENLAMV ESV  LK A +EVML LEHFF
Sbjct:   43 RTVEMYDTTLRDGTQMEGISASVLDKLKIALQLHHFGMHYIEGGWPGSNPKDVEFFERARKELPAEAWERVVAFGSTRRKFKACAEDKQLESLISAGTGCVTIVAKAWDLHVDHILEVPREENLAMVRESVEHLKMAGKEVMLDLEHFF 191          
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A836CCG4_9STRA ((R)-citramalate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCG4_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.590e-66
Identity = 115/162 (70.99%), Postives = 126/162 (77.78%), Query Frame = 0
Query:    3 PTKTVQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIV-----------AFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 153
            P + V +YDTTLRDGTQMEGISVSV+DKLKI   L +FGMHYIEGGWPGSNPKD EFFERA+ + PP+ W+RI            AFGSTRRK   C  D QLA L+AAGT CVTIVAKAWDLHVD ILEV REENLAMV ESVAFLKAA +EVM+ LEHFF
Sbjct:   30 PPRLVDIYDTTLRDGTQMEGISVSVDDKLKIARVLSNFGMHYIEGGWPGSNPKDAEFFERAKAEPPPDVWSRIAEXXXXXXXXXAAFGSTRRKNSTCEQDKQLATLIAAGTNCVTIVAKAWDLHVDHILEVPREENLAMVGESVAFLKAAGKEVMIDLEHFF 191          
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A6V1Q1T2_HETAK ((R)-citramalate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q1T2_HETAK)

HSP 1 Score: 195 bits (495), Expect = 3.790e-56
Identity = 100/153 (65.36%), Postives = 115/153 (75.16%), Query Frame = 0
Query:    1 GTPTKTVQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 153
            G   K + +YDTTLRDGTQ E +SV+V+ KL I  RL  FGM YIEGGWPGSNPKD EFF RAR +LP  +W R+VAFGSTRRK +    D Q+A LL +   CV IV K+WDLH+D ILEV REENLAMV++SVA LKAA REVML LEHFF
Sbjct:   75 GLSAKHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFF 227          
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: L1JY85_GUITC ((R)-citramalate synthase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JY85_GUITC)

HSP 1 Score: 189 bits (480), Expect = 1.540e-54
Identity = 90/147 (61.22%), Postives = 116/147 (78.91%), Query Frame = 0
Query:    7 VQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 153
            V+ YDTTLRDG Q EGIS+S +DKL+I +RL  FG+ YIEGGWPGSNPKD EFFERA+ +LPP +W+++ AFGSTR K +    D Q+  L+ +G R VT+V K+WDLHVD++LE SREENLAM+ ++V++LK+  REVML  EHFF
Sbjct:   23 VRYYDTTLRDGAQGEGISLSCDDKLRIASRLHRFGVDYIEGGWPGSNPKDAEFFERAKVELPPAAWDKVAAFGSTRYKNVKVEDDKQVKMLVDSGARVVTLVGKSWDLHVDQVLETSREENLAMIFDTVSYLKSLGREVMLDAEHFF 169          
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A7S0F219_9CRYP ((R)-citramalate synthase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F219_9CRYP)

HSP 1 Score: 187 bits (476), Expect = 2.890e-54
Identity = 89/147 (60.54%), Postives = 115/147 (78.23%), Query Frame = 0
Query:    7 VQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 153
            V+ YDTTLRDG Q EGIS+S +DKL+I  RL  FG+ YIEGGWPGSNPKD EFFERA+ +LPP +W+++ AFGSTR K +    D Q+  L+ +G R VT+V K+WDLHVD++LE SREENLAM+ ++V++LK+  REVML  EHF+
Sbjct:  116 VRYYDTTLRDGAQGEGISLSCDDKLRIAARLHRFGVDYIEGGWPGSNPKDAEFFERAKVELPPAAWDKVAAFGSTRYKNVKVEDDKQVKMLVDSGARVVTLVGKSWDLHVDQVLETSREENLAMIFDTVSYLKSLGREVMLDAEHFY 262          
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A7S4L4M6_GUITH ((R)-citramalate synthase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L4M6_GUITH)

HSP 1 Score: 189 bits (480), Expect = 9.700e-54
Identity = 90/147 (61.22%), Postives = 116/147 (78.91%), Query Frame = 0
Query:    7 VQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 153
            V+ YDTTLRDG Q EGIS+S +DKL+I +RL  FG+ YIEGGWPGSNPKD EFFERA+ +LPP +W+++ AFGSTR K +    D Q+  L+ +G R VT+V K+WDLHVD++LE SREENLAM+ ++V++LK+  REVML  EHFF
Sbjct:  111 VRYYDTTLRDGAQGEGISLSCDDKLRIASRLHRFGVDYIEGGWPGSNPKDAEFFERAKVELPPAAWDKVAAFGSTRYKNVKVEDDKQVKMLVDSGARVVTLVGKSWDLHVDQVLETSREENLAMIFDTVSYLKSLGREVMLDAEHFF 257          
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A7S1HAV1_HEMAN ((R)-citramalate synthase (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HAV1_HEMAN)

HSP 1 Score: 178 bits (451), Expect = 5.070e-53
Identity = 86/145 (59.31%), Postives = 107/145 (73.79%), Query Frame = 0
Query:    9 LYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 153
             YDTTLRDG Q EG+S+S +DKL+I  RL SFG HYIEGGWPGSNPKD EFF RA+ +LPP +W ++ AFGSTR K      D Q+  L+ +  R VT+V KAWDLHVD +LE +REEN+AM+ ++V +LK   REVML  EH+F
Sbjct:   19 FYDTTLRDGAQGEGMSLSCDDKLRIAARLHSFGAHYIEGGWPGSNPKDAEFFRRAKEELPPAAWAKVAAFGSTRYKGKKVEEDAQVQMLVDSDARVVTLVGKAWDLHVDVVLETTREENVAMIRDTVKYLKDMGREVMLDAEHYF 163          
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A7S2UWY3_9STRA ((R)-citramalate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWY3_9STRA)

HSP 1 Score: 186 bits (473), Expect = 6.370e-53
Identity = 92/146 (63.01%), Postives = 113/146 (77.40%), Query Frame = 0
Query:    7 VQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHF 152
            V++YDTTLRDGTQ E ISVSV  KL+I  RL  FG+HYIEGGWPGSNPKD+EFFERA+ +L PE+  ++ AFGSTRRK    A D Q+AAL+ +G  C+ +V K+ D HVD+ILEV REENLAMV +S+ +LK   +EVML LEHF
Sbjct:   92 VEIYDTTLRDGTQAESISVSVEGKLRIAERLAEFGVHYIEGGWPGSNPKDKEFFERAKTELSPEARTKLTAFGSTRRKFKKAAEDSQIAALVDSGVDCICLVGKSSDFHVDKILEVPREENLAMVHDSIHYLKGLGKEVMLDLEHF 237          
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A2V7MMB9_9BACT ((R)-citramalate synthase (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7MMB9_9BACT)

HSP 1 Score: 163 bits (412), Expect = 7.450e-48
Identity = 85/145 (58.62%), Postives = 104/145 (71.72%), Query Frame = 0
Query:    9 LYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 153
            LYDTTLRDGTQ EG+S+SV+DKLKI  RL   G+HY+EGGWPGSNPKD EFF R R++   ++  +I AFG TRR    C  DP L ALL A T  VT+V K+  LHV+R+LE SR+ENL M+SESV + +   REV+   EHFF
Sbjct:    3 LYDTTLRDGTQREGLSLSVDDKLKIARRLDELGIHYLEGGWPGSNPKDAEFFRRIRQEGLGQA--KIAAFGMTRRANGRCEDDPNLTALLEAETPVVTLVGKSSTLHVERVLETSRDENLRMISESVGYFRRRGREVIYDAEHFF 145          
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Match: A0A3M1EAS4_9CHLR ((R)-citramalate synthase n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1EAS4_9CHLR)

HSP 1 Score: 170 bits (431), Expect = 1.100e-47
Identity = 87/148 (58.78%), Postives = 107/148 (72.30%), Query Frame = 0
Query:    6 TVQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWPGSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAAGTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLEHFF 153
            T+ LYDTTLRDGTQ EGIS+S +DKLKI  RL  FG+HYIEGGWPGSNPKD EFFER +     ++  +I AFGSTR K   C  D  + AL+ A T  VT+V K+WDLHVD +LE  R+ENLAM+++SVA+ K   +EV+   EHFF
Sbjct:    3 TIYLYDTTLRDGTQREGISLSCDDKLKIARRLDEFGIHYIEGGWPGSNPKDAEFFERVKSLNLKQA--KIAAFGSTRYKNTPCEEDANIRALVEADTPVVTLVGKSWDLHVDVVLEADRDENLAMIADSVAYFKRMGKEVIYDAEHFF 148          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9921.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTV2_ECTSI1.280e-6876.51(R)-citramalate synthase n=1 Tax=Ectocarpus silicu... [more]
A0A836CCG4_9STRA1.590e-6670.99(R)-citramalate synthase n=1 Tax=Tribonema minus T... [more]
A0A6V1Q1T2_HETAK3.790e-5665.36(R)-citramalate synthase n=1 Tax=Heterosigma akash... [more]
L1JY85_GUITC1.540e-5461.22(R)-citramalate synthase n=1 Tax=Guillardia theta ... [more]
A0A7S0F219_9CRYP2.890e-5460.54(R)-citramalate synthase (Fragment) n=1 Tax=Hanusi... [more]
A0A7S4L4M6_GUITH9.700e-5461.22(R)-citramalate synthase n=1 Tax=Guillardia theta ... [more]
A0A7S1HAV1_HEMAN5.070e-5359.31(R)-citramalate synthase (Fragment) n=1 Tax=Hemise... [more]
A0A7S2UWY3_9STRA6.370e-5363.01(R)-citramalate synthase n=1 Tax=Fibrocapsa japoni... [more]
A0A2V7MMB9_9BACT7.450e-4858.62(R)-citramalate synthase (Fragment) n=1 Tax=Gemmat... [more]
A0A3M1EAS4_9CHLR1.100e-4758.78(R)-citramalate synthase n=1 Tax=Caldilineae bacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000891Pyruvate carboxyltransferasePFAMPF00682HMGL-likecoord: 7..150
e-value: 8.0E-16
score: 58.3
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 2..153
e-value: 9.5E-29
score: 102.4
IPR005675Citramalate synthasePANTHERPTHR43538ALPHA-IPM SYNTHASE/HOMOCITRATE SYNTHASEcoord: 5..153
IPR002034Alpha-isopropylmalate/homocitrate synthase, conserved sitePROSITEPS00815AIPM_HOMOCIT_SYNTH_1coord: 14..30
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 4..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9921contigP-wetherbeei_contig9921:1..901 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9921.1.1mRNA_P-wetherbeei_contig9921.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9921 1..901 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9921.1.1 ID=prot_P-wetherbeei_contig9921.1.1|Name=mRNA_P-wetherbeei_contig9921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp
GTPTKTVQLYDTTLRDGTQMEGISVSVNDKLKIMTRLLSFGMHYIEGGWP
GSNPKDQEFFERARRDLPPESWNRIVAFGSTRRKRIACAADPQLAALLAA
GTRCVTIVAKAWDLHVDRILEVSREENLAMVSESVAFLKAADREVMLYLE
HFF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000891PYR_CT
IPR013785Aldolase_TIM
IPR005675Citramal_synthase
IPR002034AIPM/Hcit_synth_CS