prot_P-wetherbeei_contig9906.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9906.2.1
Unique Nameprot_P-wetherbeei_contig9906.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length156
Homology
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Match: A0A353LN58_9PROT (Translation initiation factor IF-3 n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LN58_9PROT)

HSP 1 Score: 224 bits (571), Expect = 1.470e-72
Identity = 112/142 (78.87%), Postives = 126/142 (88.73%), Query Frame = 0
Query:   15 RRPMSATPSREGPRVNEEIDVPNVRLIDGEGEQVGVVTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARKKQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELSHQELGM 156
            RRP +A PSR+GPRVN+ IDVP VRLID EG+QVGVV+   A+ AA  AGLDLVEVSPNVDPPVCK+LDYGRFKYQAQKKANEARKKQK V+IKEIKMRP ID+HDY VKM+A+ RFFE GDKVKVTIRFRGRE++HQ+LGM
Sbjct:    3 RRPAAAPPSRKGPRVNDFIDVPEVRLIDAEGKQVGVVSIDEALSAAKAAGLDLVEVSPNVDPPVCKILDYGRFKYQAQKKANEARKKQKTVDIKEIKMRPNIDVHDYDVKMRAMNRFFEAGDKVKVTIRFRGREMAHQDLGM 144          
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Match: IF3_PARL1 (Translation initiation factor IF-3 n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=IF3_PARL1)

HSP 1 Score: 211 bits (537), Expect = 1.870e-67
Identity = 105/139 (75.54%), Postives = 119/139 (85.61%), Query Frame = 0
Query:   18 MSATPSREGPRVNEEIDVPNVRLIDGEGEQVGVVTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARKKQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELSHQELGM 156
            M A P+REGPR+N+ ID P V LID EGE+ GV+ T  AI+ A +AGLDLVEVSPN  PPVCKLLDYG+FKYQAQKKANEARKKQK VE+KEIKMRP ID HDY VKM+A+ RFFEEGDKVKVT+RFRGRE++HQELGM
Sbjct:    1 MQAPPTREGPRINDMIDEPTVLLIDAEGEKRGVIPTDEAIRMAEEAGLDLVEVSPNAKPPVCKLLDYGKFKYQAQKKANEARKKQKTVEVKEIKMRPNIDTHDYEVKMRAMLRFFEEGDKVKVTLRFRGREMAHQELGM 139          
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Match: A0A3N1LGU4_9PROT (Translation initiation factor IF-3 n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1LGU4_9PROT)

HSP 1 Score: 210 bits (535), Expect = 7.950e-67
Identity = 102/156 (65.38%), Postives = 127/156 (81.41%), Query Frame = 0
Query:    1 SGRNLENNREVYTIRRPMSATPSREGPRVNEEIDVPNVRLIDGEGEQVGVVTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARKKQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELSHQELGM 156
            +G +  ++R  +  R P   TPSR+GPRVN EI VP VRL+D  GE VGVVTT  AI  A +AGLDLVEV+PN DPPVCK+LD+G+FKY+ QKK NEARKKQKI+E+KEIK+RP ID HDY VKM+++Q+F EEGDKVKVT+RFRGRE++HQ+LG+
Sbjct:    7 AGLHCHDHRRRFIARPPFEPTPSRDGPRVNNEIRVPRVRLVDERGEMVGVVTTPEAITMAEEAGLDLVEVAPNADPPVCKILDFGKFKYEEQKKKNEARKKQKIIEVKEIKLRPGIDDHDYDVKMRSMQKFIEEGDKVKVTLRFRGREMAHQDLGL 162          
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Match: A0A0N1LM39_9PROT (Translation initiation factor IF-3 n=9 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A0N1LM39_9PROT)

HSP 1 Score: 209 bits (531), Expect = 1.860e-66
Identity = 99/135 (73.33%), Postives = 121/135 (89.63%), Query Frame = 0
Query:   22 PSREGPRVNEEIDVPNVRLIDGEGEQVGVVTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARKKQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELSHQELGM 156
            P R+GPR+N EI+V +VRL+D EGE VGVV+ R A+ AA DAGLDLVEVSPN DPPVCK+LDYG++KY+AQKKANEARKKQKI+E+KEIK+RP ID HDY +KMKA++RF EEGDKVKVT+RFRGRE++HQ++GM
Sbjct:   11 PQRDGPRINREINVRSVRLVDAEGEMVGVVSLRDALIAAEDAGLDLVEVSPNADPPVCKILDYGKYKYEAQKKANEARKKQKIIEVKEIKLRPNIDEHDYEIKMKAMRRFLEEGDKVKVTMRFRGREMAHQDIGM 145          
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Match: A0A3D5URD5_9HYPH (Translation initiation factor IF-3 n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A3D5URD5_9HYPH)

HSP 1 Score: 208 bits (529), Expect = 3.280e-66
Identity = 102/138 (73.91%), Postives = 119/138 (86.23%), Query Frame = 0
Query:   18 MSATPSREGPRVNEEIDVPNVRLIDGEGEQVGVVTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARKKQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELSHQELG 155
            M A P++EGPRVN+ ID P V LID EGE+ GV+ T  AI+ A +AGLDLVEVSPN  PPVCKLLDYG+FKYQAQKKANEARKKQK VE+KEIKMRP ID+HDY VKM+++ RFFEEGDKVKVT+RFRGRE++HQ+LG
Sbjct:    1 MQAPPTKEGPRVNDMIDEPTVLLIDAEGEKRGVIPTDEAIRMAEEAGLDLVEVSPNAKPPVCKLLDYGKFKYQAQKKANEARKKQKTVEVKEIKMRPNIDVHDYDVKMRSMLRFFEEGDKVKVTLRFRGREMAHQDLG 138          
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Match: A0A545U187_9PROT (Translation initiation factor IF-3 n=2 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545U187_9PROT)

HSP 1 Score: 208 bits (529), Expect = 3.620e-66
Identity = 100/142 (70.42%), Postives = 119/142 (83.80%), Query Frame = 0
Query:   15 RRPMSATPSREGPRVNEEIDVPNVRLIDGEGEQVGVVTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARKKQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELSHQELGM 156
            R P+  TPSR+GPRVNE+I VP VRL+D  GEQVGVV+   A+Q A  AGLDLVE+SPN DPPVCK+LDYGRF+Y+AQKK NEARKKQK++++KEIKMRP ID HDY VKM+A  RF  EGDKVKVT+RFRGRE+ HQ+LG+
Sbjct:    3 RPPVDLTPSRDGPRVNEQIGVPTVRLVDENGEQVGVVSKSDALQRAFAAGLDLVEISPNADPPVCKILDYGRFRYEAQKKKNEARKKQKVIDVKEIKMRPNIDSHDYDVKMRAANRFIGEGDKVKVTMRFRGREMVHQDLGL 144          
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Match: A0A095UCU7_9HYPH (Translation initiation factor IF-3 n=7 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A095UCU7_9HYPH)

HSP 1 Score: 208 bits (529), Expect = 5.350e-66
Identity = 105/153 (68.63%), Postives = 123/153 (80.39%), Query Frame = 0
Query:    5 LENNREVYTIRRPMSA-TPSREGPRVNEEIDVPNVRLIDGEGEQVGVVTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARKKQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELSHQELGM 156
              NN+E  TIRRP  A  P +EGPR N EI +P V+LID EG+ +GVV T  A++ A +AGLDLVE+SPN DPPVCK+LD G+ KY  QKKA EARKKQKIVE+KEIKMRP ID HDY VKMKA+ RFFEEGDKVKVT++FRGRE++HQELGM
Sbjct:    4 FRNNQENTTIRRPFKADAPVKEGPRANREIRIPKVQLIDAEGQNLGVVPTDQALRMAEEAGLDLVEISPNNDPPVCKILDLGKLKYANQKKAAEARKKQKIVEVKEIKMRPNIDTHDYEVKMKAINRFFEEGDKVKVTLKFRGREMAHQELGM 156          
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Match: A0A2M7GRF9_9PROT (Translation initiation factor IF-3 n=9 Tax=Rhodospirillales TaxID=204441 RepID=A0A2M7GRF9_9PROT)

HSP 1 Score: 207 bits (527), Expect = 6.400e-66
Identity = 96/135 (71.11%), Postives = 120/135 (88.89%), Query Frame = 0
Query:   22 PSREGPRVNEEIDVPNVRLIDGEGEQVGVVTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARKKQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELSHQELGM 156
            PS++GPR+NE+IDV  VR++D +GE VGV++T+ AI+ A + GLDLVEVSPN DPPVCK+LDYG+FKY+AQKKANEARKKQK++E+KEIKMRP ID HDY  KMKAV++F E GDKVK+TIRFRGRE++HQ+LGM
Sbjct:    6 PSKDGPRINEDIDVAQVRVVDADGEMVGVLSTKEAIEMAFEVGLDLVEVSPNADPPVCKILDYGKFKYEAQKKANEARKKQKVIEVKEIKMRPGIDEHDYQTKMKAVRKFLENGDKVKMTIRFRGREMAHQDLGM 140          
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Match: A0A2D6JW27_9PROT (Translation initiation factor IF-3 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D6JW27_9PROT)

HSP 1 Score: 207 bits (527), Expect = 7.290e-66
Identity = 95/143 (66.43%), Postives = 123/143 (86.01%), Query Frame = 0
Query:   14 IRRPMSATPSREGPRVNEEIDVPNVRLIDGEGEQVGVVTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARKKQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELSHQELGM 156
            +RRP +  P+REGPRVNE I+   +R+++ +GE VGV++    I+ A +AGLDLVEVSPN DPPVCK+LDYG++KY+AQKKANEARKKQK++++KEIKMRP ID HDY VKM++V+RF +EGDKVK+TIRFRGRE++HQELGM
Sbjct:    2 VRRPFNQAPTREGPRVNEHIEAEKIRVVNADGEMVGVISKEEGIEIAFEAGLDLVEVSPNADPPVCKVLDYGKYKYEAQKKANEARKKQKVIDVKEIKMRPGIDEHDYQVKMRSVRRFLDEGDKVKMTIRFRGREMAHQELGM 144          
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Match: A0A6N6VMI6_9HYPH (Translation initiation factor IF-3 n=2 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VMI6_9HYPH)

HSP 1 Score: 207 bits (526), Expect = 1.040e-65
Identity = 103/142 (72.54%), Postives = 121/142 (85.21%), Query Frame = 0
Query:   15 RRPMSATPSREGPRVNEEIDVPNVRLIDGEGEQVGVVTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARKKQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELSHQELGM 156
            RRP+ A P+REGPR+NE ID   V LID EGE+ GV+ T  A++ A +AGLDLVEVSPN  PPVCKLLD+G+FK+QAQKKANEARKKQK VE+KEIKMRP ID HDY VKMK++ RFF+EGDKVKVT+RFRGRE++HQELGM
Sbjct:    3 RRPVQAPPTREGPRINEMIDESTVLLIDAEGEKRGVIPTVEAMRMAEEAGLDLVEVSPNSKPPVCKLLDFGKFKFQAQKKANEARKKQKTVEVKEIKMRPNIDTHDYDVKMKSMLRFFDEGDKVKVTLRFRGREMAHQELGM 144          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9906.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LN58_9PROT1.470e-7278.87Translation initiation factor IF-3 n=2 Tax=Alphapr... [more]
IF3_PARL11.870e-6775.54Translation initiation factor IF-3 n=6 Tax=Alphapr... [more]
A0A3N1LGU4_9PROT7.950e-6765.38Translation initiation factor IF-3 n=1 Tax=Stella ... [more]
A0A0N1LM39_9PROT1.860e-6673.33Translation initiation factor IF-3 n=9 Tax=Alphapr... [more]
A0A3D5URD5_9HYPH3.280e-6673.91Translation initiation factor IF-3 n=1 Tax=Rhodobi... [more]
A0A545U187_9PROT3.620e-6670.42Translation initiation factor IF-3 n=2 Tax=Denitro... [more]
A0A095UCU7_9HYPH5.350e-6668.63Translation initiation factor IF-3 n=7 Tax=Rhizobi... [more]
A0A2M7GRF9_9PROT6.400e-6671.11Translation initiation factor IF-3 n=9 Tax=Rhodosp... [more]
A0A2D6JW27_9PROT7.290e-6666.43Translation initiation factor IF-3 n=2 Tax=Alphapr... [more]
A0A6N6VMI6_9HYPH1.040e-6572.54Translation initiation factor IF-3 n=2 Tax=Parviba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilyGENE3D3.10.20.80coord: 20..96
e-value: 1.5E-31
score: 110.2
IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilySUPERFAMILY54364Translation initiation factor IF3, N-terminal domaincoord: 26..100
IPR019815Translation initiation factor 3, C-terminalPFAMPF00707IF3_Ccoord: 105..156
e-value: 7.5E-23
score: 80.3
IPR001288Translation initiation factor 3TIGRFAMTIGR00168TIGR00168coord: 29..155
e-value: 7.0E-55
score: 183.1
IPR001288Translation initiation factor 3PANTHERPTHR10938TRANSLATION INITIATION FACTOR IF-3coord: 17..155
IPR019814Translation initiation factor 3, N-terminalPFAMPF05198IF3_Ncoord: 29..98
e-value: 2.7E-29
score: 101.3
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilyGENE3D3.30.110.10coord: 97..156
e-value: 1.0E-20
score: 75.5
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilySUPERFAMILY55200Translation initiation factor IF3, C-terminal domaincoord: 104..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR10938:SF0TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIALcoord: 17..155
IPR019813Translation initiation factor 3, conserved sitePROSITEPS00938IF3coord: 80..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9906contigP-wetherbeei_contig9906:1979..2446 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9906.2.1mRNA_P-wetherbeei_contig9906.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9906 1979..2446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9906.2.1 ID=prot_P-wetherbeei_contig9906.2.1|Name=mRNA_P-wetherbeei_contig9906.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
SGRNLENNREVYTIRRPMSATPSREGPRVNEEIDVPNVRLIDGEGEQVGV
VTTRAAIQAAMDAGLDLVEVSPNVDPPVCKLLDYGRFKYQAQKKANEARK
KQKIVEIKEIKMRPTIDIHDYGVKMKAVQRFFEEGDKVKVTIRFRGRELS
HQELGM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036787T_IF-3_N_sf
IPR019815Translation_initiation_fac_3_C
IPR001288Translation_initiation_fac_3
IPR019814Translation_initiation_fac_3_N
IPR036788T_IF-3_C_sf
IPR019813Translation_initiation_fac3_CS