prot_P-wetherbeei_contig9675.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9675.1.1
Unique Nameprot_P-wetherbeei_contig9675.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length149
Homology
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BLAST of mRNA_P-wetherbeei_contig9675.1.1 vs. uniprot
Match: A0A7S2AJS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJS9_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.400e-12
Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 0 
Query:   11 LTPFMLYYCEHRDVVAAALPNAPPEDISRTIAERWRGLPEQSRKAYCLMANTYTENVPKYGPAPALPGKRKRDXXXXXXXXXXXXXXXVSAYVHFNRHHRLHMRHE 116
            LTPFM++YCE+++ V  A PNA P  +SR I E+W+ L     + Y +++ TY +N     P      +RKR+ XXXXXXXXX      SAY+ F++HHR+ ++ E
Sbjct:    6 LTPFMIFYCENKESVQIANPNAGPHVVSRMIVEQWKSLAPDKSRGYSVLSATYADNKKNLTPV-----RRKRERXXXXXXXXXSA---TSAYMFFSKHHRMLLKQE 103
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BLAST of mRNA_P-wetherbeei_contig9675.1.1 vs. uniprot
Match: A0A7S3JW32_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW32_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.360e-10
Identity = 27/55 (49.09%), Postives = 41/55 (74.55%), Query Frame = 0 
Query:   11 LTPFMLYYCEHRDVVAAALPNAPPEDISRTIAERWRGLPEQSRKAYCLMANTYTE 65
            LTPFML++CEH+DVV  A P+A P ++S+ IA+ W+ L  +  +AY +++ TYTE
Sbjct:    5 LTPFMLFFCEHKDVVQQANPSAAPHEVSQIIADNWKALAPEKARAYSVLSATYTE 59
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9675.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2AJS9_9STRA1.400e-1242.45Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3JW32_9STRA2.360e-1049.09Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 6..72
e-value: 3.7E-8
score: 43.1
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 8..63
e-value: 2.0E-11
score: 44.1
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 7..56
score: 11.370894
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10High mobility group box domaincoord: 9..66
e-value: 1.9E-12
score: 49.3
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10High mobility group box domaincoord: 78..126
e-value: 7.1E-5
score: 25.0
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 8..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..100
NoneNo IPR availablePANTHERPTHR48112HIGH MOBILITY GROUP PROTEIN DSP1coord: 8..62
NoneNo IPR availablePANTHERPTHR48112:SF22HIGH MOBILITY GROUP PROTEIN DSP1coord: 78..116
NoneNo IPR availablePANTHERPTHR48112:SF22HIGH MOBILITY GROUP PROTEIN DSP1coord: 8..62
NoneNo IPR availablePANTHERPTHR48112HIGH MOBILITY GROUP PROTEIN DSP1coord: 78..116
NoneNo IPR availableCDDcd00084HMG-boxcoord: 8..56
e-value: 5.05637E-13
score: 58.3991

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9675contigP-wetherbeei_contig9675:1026..1608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9675.1.1mRNA_P-wetherbeei_contig9675.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9675 742..1735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9675.1.1 ID=prot_P-wetherbeei_contig9675.1.1|Name=mRNA_P-wetherbeei_contig9675.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp
MSVSGPYRRPLTPFMLYYCEHRDVVAAALPNAPPEDISRTIAERWRGLPE
QSRKAYCLMANTYTENVPKYGPAPALPGKRKRDKKERRKRDPREPRPPVS
AYVHFNRHHRLHMRHEHRVSAGMALCRDDIVMTLLVILIVLFRLHFLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf