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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000504 | RNA recognition motif domain | SMART | SM00360 | rrm1_1 | coord: 16..86
e-value: 4.2E-5
score: 32.9 |
| IPR000504 | RNA recognition motif domain | PFAM | PF00076 | RRM_1 | coord: 19..79
e-value: 6.1E-8
score: 32.4 |
| IPR000504 | RNA recognition motif domain | PROSITE | PS50102 | RRM | coord: 15..97
score: 11.537011 |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | GENE3D | 3.30.70.330 | | coord: 5..133
e-value: 1.1E-14
score: 56.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 116..135 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 96..141 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 262..276 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 255..276 |
| None | No IPR available | CDD | cd00590 | RRM_SF | coord: 17..92
e-value: 4.58325E-10
score: 53.4629 |
| IPR040224 | RAD52 motif-containing protein 1 | PANTHER | PTHR31164 | RAD52 MOTIF-CONTAINING PROTEIN 1 | coord: 2..77 |
| IPR035979 | RNA-binding domain superfamily | SUPERFAMILY | 54928 | RNA-binding domain, RBD | coord: 11..127 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig966.1.1 ID=prot_P-wetherbeei_contig966.1.1|Name=mRNA_P-wetherbeei_contig966.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=437bp
MTNELLSFQKPADANILHVTRLSNTATEDGVAALFQRYGALCRVKVKDSK
SYGRFAFVEFFSRHSASLARKALANKMLDSVWWDCVGREVRVASRKGKGK
SVPRGSGAGTGSGDGDGSGGNGTGSGSSGSNDDGTPGSGEAARAPPSTCA
CDELLAPHQCTAMANHFLGFDGWRCRVIQLPRLMRAPAVDYGGCFDDCAA
DGDVNIQGPGAPRRACVSSCFVNGESGRGGGGGLRHDGGGGGGFGEWELP
CTPGPEVRRRKAAAAPAADEEDPELRSAARDALELAPAFSEAAWGQKERG
APLSFSECVACAALEVELKDGRTVTGCGVARLPLGAAASAAAAAARGAAG
GNAARASAGAVDAAAATAGATDPGAIALSKKLALGAARQAAFQRLRLVVL
DGRCRHVVIVPWEGPRCGPVVMSGFVPGGKGDGRAV* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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