prot_P-wetherbeei_contig9636.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9636.1.1
Unique Nameprot_P-wetherbeei_contig9636.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length108
Homology
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BLAST of mRNA_P-wetherbeei_contig9636.1.1 vs. uniprot
Match: D7FM59_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM59_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 8.830e-14
Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 0 
Query:    4 LRALQRRKPPIRRLILTDNLIGAATISECAGPVLTGGLALETLDLSWNCLPPGAGAELADALAWNRSLASLALAHNNVG 82
            L+AL R +PP+  L L+DN +    + ECAGP+LTGGL+L +LDL WN L   A  E++DALAWN+S+  + L  NN G
Sbjct:  184 LKALARYQPPVTHLGLSDNGLTLKVMQECAGPLLTGGLSLLSLDLGWNHLNQQAIEEVSDALAWNKSVTKMNLEFNNSG 262
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9636.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM59_ECTSI8.830e-1450.63Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 40..67
e-value: 12.0
score: 9.6
coord: 68..94
e-value: 1.2
score: 16.7
NoneNo IPR availablePANTHERPTHR24114:SF30RICH REPEAT AND NACHT DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 9..107
NoneNo IPR availablePANTHERPTHR24114LEUCINE RICH REPEAT FAMILY PROTEINcoord: 9..107
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 5..106
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 68..86
e-value: 0.082
score: 13.1
coord: 43..53
e-value: 0.48
score: 10.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..108
e-value: 6.1E-18
score: 66.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9636contigP-wetherbeei_contig9636:1520..2182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9636.1.1mRNA_P-wetherbeei_contig9636.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9636 1520..2204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9636.1.1 ID=prot_P-wetherbeei_contig9636.1.1|Name=mRNA_P-wetherbeei_contig9636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp
MMLLRALQRRKPPIRRLILTDNLIGAATISECAGPVLTGGLALETLDLSW
NCLPPGAGAELADALAWNRSLASLALAHNNVGSAGAAFADALQHNGTLTA
LDLAANSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf