prot_P-wetherbeei_contig9604.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9604.2.1
Unique Nameprot_P-wetherbeei_contig9604.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length66
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig9604.2.1 vs. uniprot
Match: A0A6H5JAA6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAA6_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 8.960e-7
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0 
Query:    4 DILASLTTCPAGCQRMLPLLLPQVNTMAHAALERRFPAEYARRLADAVAWQADVAFVR 61
            ++ A+  +CPAGCQRM+PL+LP+V TM    L R FP+ Y  RL +    +A V+ VR
Sbjct:  484 NVRANRISCPAGCQRMIPLVLPEVTTMVQKLLTRGFPSAYRERLQETEPERALVSQVR 541
[Close]
BLAST of mRNA_P-wetherbeei_contig9604.2.1 vs. uniprot
Match: D7G4J4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J4_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 1.220e-6
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0 
Query:    4 DILASLTTCPAGCQRMLPLLLPQVNTMAHAALERRFPAEYARRLADAVAWQADVAFVR 61
            ++ A+  +CPAGCQRM+PL+LP+V TM    L R FP+ Y  RL +    +A V+ VR
Sbjct:  229 NLRANRISCPAGCQRMIPLVLPEVTTMVQKLLTRGFPSAYRERLQETEPERALVSQVR 286
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9604.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAA6_9PHAE8.960e-746.55RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G4J4_ECTSI1.220e-646.55RING-type domain-containing protein n=1 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9604contigP-wetherbeei_contig9604:1751..1948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9604.2.1mRNA_P-wetherbeei_contig9604.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9604 1751..1950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9604.2.1 ID=prot_P-wetherbeei_contig9604.2.1|Name=mRNA_P-wetherbeei_contig9604.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp
IPADILASLTTCPAGCQRMLPLLLPQVNTMAHAALERRFPAEYARRLADA
VAWQADVAFVRGLPAR
back to top