prot_P-wetherbeei_contig9566.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9566.1.1
Unique Nameprot_P-wetherbeei_contig9566.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length219
Homology
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BLAST of mRNA_P-wetherbeei_contig9566.1.1 vs. uniprot
Match: A0A835Z8L7_9STRA (Glucosylceramidase, family GH30 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.520e-13
Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = 0 
Query:  115 CLSIT--GGSELDGPTLTLDRCAGKAWQTWDV----TEGGGEIRSR-VNGNCVTAGWPYLTATAARTPEGRVAVVALNEAGEATDFSVLLPREGKKLAASIPAHTMQTYMI 218
            CL++   G     G  +TL  C G+  Q +DV     +GG    +    G C+TAGWP+ TA+A  TP G   VV LNEA E  +F ++   +G+ LAA+IPAH++QTY++
Sbjct:  534 CLALLEPGARSGRGAGVTLGGC-GRGAQRFDVGSADAKGGAPFTAADARGQCLTAGWPWFTASAFETPRGDTVVVVLNEAEEPVEFDIVFQPQGRALAAAIPAHSIQTYVL 643
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9566.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z8L7_9STRA1.520e-1340.54Glucosylceramidase, family GH30 n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.80.10.50coord: 107..212
e-value: 1.9E-7
score: 33.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..104
IPR033452Glycosyl hydrolase family 30, beta sandwich domainPFAMPF17189Glyco_hydro_30Ccoord: 167..216
e-value: 4.6E-7
score: 29.9
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 112..162
score: 9.9075
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 110..170
e-value: 7.67323E-4
score: 36.3295
IPR035992Ricin B-like lectinsSUPERFAMILY50370Ricin B-like lectinscoord: 111..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9566contigP-wetherbeei_contig9566:119..775 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9566.1.1mRNA_P-wetherbeei_contig9566.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9566 119..931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9566.1.1 ID=prot_P-wetherbeei_contig9566.1.1|Name=mRNA_P-wetherbeei_contig9566.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bp
AAAVEDAPAAETPAPAAIIETKTPTAGITPAPAPAPEAVAKSAADAEAAD
ADGATTANSAVAVVTDIDNDDGSDAAATEADDDAPAADDAGAARRRRQRQ
RRGRKLQEWDADDLCLSITGGSELDGPTLTLDRCAGKAWQTWDVTEGGGE
IRSRVNGNCVTAGWPYLTATAARTPEGRVAVVALNEAGEATDFSVLLPRE
GKKLAASIPAHTMQTYMI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033452GH30_C
IPR000772Ricin_B_lectin
IPR035992Ricin_B-like_lectins