prot_P-wetherbeei_contig9556.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9556.1.1
Unique Nameprot_P-wetherbeei_contig9556.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length513
Homology
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BLAST of mRNA_P-wetherbeei_contig9556.1.1 vs. uniprot
Match: D8LID6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LID6_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.440e-28
Identity = 98/280 (35.00%), Postives = 125/280 (44.64%), Query Frame = 0 
Query:  114 SLVSLCVNQIGRDFLSYDGADPDMREAVSLLPCGVVTAIAAAASRHRRVADSNVRLLCGPGMRSLVLRGPITDEGGATILPEVRGAAAVAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPC---GSVDAANEPGTRPGAA---LTWLPLPAAXXXXXSEGSSSAPALDTWEDAPAVVESVFGGCMSLTDLTLSSPHITEAFVARVADRCPTLRRLALHDCFGTDINPGAVLSSVARLTALREIDVSGCRWFGDATLLRWAHRL 387
            +L+SLC+ QIGRDFL+Y   D  + EA  LLP   ++ ++ +AS    VAD N+ LLC PG+ +L LRG  TDEG   +LP +                                                    A C    +VD A    +R  +    L  L  PAA      E      A + WE A   +E+   G +SLT L LSSP +T  FV R+  R P+LRRL L   FG    P  V   V RL ALRE+D+S C WF D TL R A  L
Sbjct:   87 TLLSLCIRQIGRDFLAYRADDDAIAEAFLLLPSPCLSRLSRSASAGGNVADHNIGLLCSPGVSTLWLRGRFTDEGVGALLPALNAG----------------------------NRPNGGSHAAELAEVYRDGTAADCLAGNAVDTAMGTESRVASGDDGLVALIQPAAYHAAAGEAIVEG-AEEEWETACDRIEASLRGGVSLTSLDLSSPRVTAGFVKRLTARIPSLRRLGLRGSFGVVGGPDFVCDHVPRLAALRELDLSHCTWFCDLTLRRLAKSL 337
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9556.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LID6_ECTSI1.440e-2835.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 284..389
e-value: 3.5E-11
score: 44.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 305..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9556contigP-wetherbeei_contig9556:313..2460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9556.1.1mRNA_P-wetherbeei_contig9556.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9556 247..2518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9556.1.1 ID=prot_P-wetherbeei_contig9556.1.1|Name=mRNA_P-wetherbeei_contig9556.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=513bp
MTGRKKGKQSGSFRSKGERARLMGQTIREGCSAVRPAYKPAPSLRPPRLS
LQAQGALRGLICARVLSDQDSGADGQARRTGAPVLPGGIRASGELDEGRR
PLPIIRRERRGPPSLVSLCVNQIGRDFLSYDGADPDMREAVSLLPCGVVT
AIAAAASRHRRVADSNVRLLCGPGMRSLVLRGPITDEGGATILPEVRGAA
AVAATAAAAVAAKVNGAALAAAPLAEPGAAPSDAPAAASPAAAAEAAAAP
CGSVDAANEPGTRPGAALTWLPLPAASAASASEGSSSAPALDTWEDAPAV
VESVFGGCMSLTDLTLSSPHITEAFVARVADRCPTLRRLALHDCFGTDIN
PGAVLSSVARLTALREIDVSGCRWFGDATLLRWAHRLCGGGGNASRRSGG
YGGAISFCGDDDGGGGGGGSSGGSSAWSTLWDGSSGMADSFGAWMAAAQA
APTAVAAACNGGAGAGDRNGASDKTLLRKLTVTCRNTLVTEAGALAAMRV
ASELKVVREDAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf