prot_P-wetherbeei_contig8866.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8866.2.1
Unique Nameprot_P-wetherbeei_contig8866.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length145
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Match: A0A0S8BAV8_9PROT (MerR family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BAV8_9PROT)

HSP 1 Score: 182 bits (462), Expect = 9.770e-57
Identity = 95/121 (78.51%), Postives = 108/121 (89.26%), Query Frame = 0 
Query:   13 EYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIYSLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEAHKRQLEQQREDIEAQLSEIVLFEKRCRKRLAEQ 133
            EYSI ELAREFDVTPR IRFYE +GLL+P REGQRRIY+ R+RTRLKLTLRGKRLGLSLSEIRE++DMY+ GRDERPQLE+FLA LE+H+  LEQQR DIEAQLSEI +FEKR RK+LA +
Sbjct:   16 EYSIGELAREFDVTPRTIRFYEDQGLLAPRREGQRRIYTQRERTRLKLTLRGKRLGLSLSEIRELIDMYEPGRDERPQLERFLAALESHRGALEQQRTDIEAQLSEIAVFEKRVRKQLARE 136
[Close]
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Match: A0A1F4EX47_9PROT (MerR family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EX47_9PROT)

HSP 1 Score: 182 bits (461), Expect = 1.220e-56
Identity = 94/126 (74.60%), Postives = 112/126 (88.89%), Query Frame = 0 
Query:   10 EPSEYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIYSLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEAHKRQLEQQREDIEAQLSEIVLFEKRCRKRLAEQKK 135
            E +EYSI +LAREFDVTPRAIRFYEA+GLL+P REGQRRIY+ RDRTRLKLTLRGKRLGL+LSEIRE++DMY+ GRD+RPQLE+FLAVLE+HK  L QQR D+EAQLSEI  FE+R RK+L  +++
Sbjct:    7 ERAEYSIGDLAREFDVTPRAIRFYEAQGLLAPGREGQRRIYTPRDRTRLKLTLRGKRLGLALSEIRELIDMYEPGRDQRPQLERFLAVLESHKASLAQQRADLEAQLSEIAAFERRVRKQLVARRR 132
[Close]
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Match: A0A1F4F784_9PROT (MerR family transcriptional regulator n=6 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F784_9PROT)

HSP 1 Score: 181 bits (459), Expect = 2.540e-56
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 0 
Query:   10 EPSEYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIYSLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEAHKRQLEQQREDIEAQLSEIVLFEKRCRKRLAEQKKA 136
            E SEYSISELAREFDVTPRAIRFYEAEGLL+P R GQRRIY+ RDRTRLKLTLRGKRLGL+LSEI+E+V+MY+ GRDERPQLE+FLAVL  HK  L QQR DIEAQL+EI  FEKR R+RL   K++
Sbjct:    8 ERSEYSISELAREFDVTPRAIRFYEAEGLLAPRRAGQRRIYAPRDRTRLKLTLRGKRLGLTLSEIKELVEMYEPGRDERPQLERFLAVLAQHKEALAQQRADIEAQLAEIATFEKRIRQRLGGPKRS 134
[Close]
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Match: A0A177QYB2_9PROT (MerR family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177QYB2_9PROT)

HSP 1 Score: 181 bits (458), Expect = 3.170e-56
Identity = 97/121 (80.17%), Postives = 108/121 (89.26%), Query Frame = 0 
Query:   10 EPSEYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIYSLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEAHKRQLEQQREDIEAQLSEIVLFEKRCRKRL 130
            E SEYSISELAREFDVTPRAIRFYE +GL+SP R GQRRIY+ RDRTRLKLTLRGKRLGL+LSEIRE++DMY+ GRDERPQLE+FLAVLE+H+  L QQR DIEAQLSEI  FEKR RK+L
Sbjct:    8 ERSEYSISELAREFDVTPRAIRFYEDQGLISPRRAGQRRIYTPRDRTRLKLTLRGKRLGLTLSEIRELIDMYEPGRDERPQLERFLAVLESHRSSLLQQRADIEAQLSEIQTFEKRVRKQL 128
[Close]
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Match: A0A537D777_9PROT (MerR family DNA-binding transcriptional regulator n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537D777_9PROT)

HSP 1 Score: 177 bits (450), Expect = 5.240e-55
Identity = 93/121 (76.86%), Postives = 108/121 (89.26%), Query Frame = 0 
Query:   10 EPSEYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIYSLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEAHKRQLEQQREDIEAQLSEIVLFEKRCRKRL 130
            E +E+SI ELAREFD+TPRAIRFYEAEGL++P R+GQRRIY+ RDRTRLKLTLRGKRLGL+LSEIRE++DMY+ GRD RPQLE+FLAVLE+HK  L QQR DIEAQLSEI  FEKR RK++
Sbjct:    7 ERTEFSIGELAREFDITPRAIRFYEAEGLIAPRRDGQRRIYTPRDRTRLKLTLRGKRLGLTLSEIRELIDMYEPGRDARPQLERFLAVLESHKASLLQQRADIEAQLSEIQTFEKRVRKQI 127
[Close]
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Match: A0A1F4B0P9_9PROT (MerR family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B0P9_9PROT)

HSP 1 Score: 176 bits (447), Expect = 2.130e-54
Identity = 93/127 (73.23%), Postives = 110/127 (86.61%), Query Frame = 0 
Query:   10 EPSEYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIYSLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEAHKRQLEQQREDIEAQLSEIVLFEKRCRKRLAEQKKA 136
            E +EYSI ELAREFDVTPR IRFYE +GLL+P R+GQRRIY+ RDRTRLKLTLRGKRLGL+LSEI+E+V++Y+ GRDERPQLE+FLAVL  HKR LEQQR D+EAQL+EI  FEKR R+RL  ++ A
Sbjct:   15 ERAEYSIGELAREFDVTPRTIRFYEDQGLLAPRRDGQRRIYAPRDRTRLKLTLRGKRLGLTLSEIKELVELYEPGRDERPQLERFLAVLTQHKRALEQQRTDLEAQLAEIATFEKRIRQRLGGRRDA 141
[Close]
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Match: A0A536XB43_9PROT (MerR family DNA-binding transcriptional regulator n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XB43_9PROT)

HSP 1 Score: 173 bits (439), Expect = 2.400e-53
Identity = 95/133 (71.43%), Postives = 111/133 (83.46%), Query Frame = 0 
Query:   10 EPSEYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIYSLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEAHKRQLEQQREDIEAQLSEIVLFEKRCRKRLAEQKKAGGRGRR 142
            E +E+SISELAREFDVTPRAIRFYE +GLL+P R GQRRIY+ RDRTRLKLTLRGKRLGL+L+EIRE++DMY+ GRDERPQLE+F  VL+ H++ L QQR DIEAQL+EI  FEKR RK+L       GRGRR
Sbjct:    4 ERAEFSISELAREFDVTPRAIRFYEDQGLLAPRRAGQRRIYTPRDRTRLKLTLRGKRLGLTLAEIRELIDMYEPGRDERPQLERFREVLDTHRKSLLQQRADIEAQLAEIATFEKRVRKQL-------GRGRR 129
[Close]
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Match: A0A536STP0_9PROT (MerR family DNA-binding transcriptional regulator n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536STP0_9PROT)

HSP 1 Score: 173 bits (439), Expect = 2.560e-53
Identity = 90/118 (76.27%), Postives = 106/118 (89.83%), Query Frame = 0 
Query:   13 EYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIYSLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEAHKRQLEQQREDIEAQLSEIVLFEKRCRKRL 130
            E+SI ELA+EFDVTPRAIRFYE +GLL+P REGQRRIY+LRDRTRLKLTLRGKRLGLSL+EIRE++DMY+ GRDERPQLE+F  VLE+H++ L QQR DIEAQL+EI  FEKR +K+L
Sbjct:    9 EFSIGELAKEFDVTPRAIRFYEDQGLLTPRREGQRRIYTLRDRTRLKLTLRGKRLGLSLAEIRELIDMYEPGRDERPQLERFREVLESHRKSLLQQRADIEAQLAEIETFEKRVQKQL 126
[Close]
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Match: A0A521Z4C3_9PROT (MerR family DNA-binding transcriptional regulator n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521Z4C3_9PROT)

HSP 1 Score: 173 bits (438), Expect = 3.190e-53
Identity = 93/121 (76.86%), Postives = 106/121 (87.60%), Query Frame = 0 
Query:   10 EPSEYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIYSLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEAHKRQLEQQREDIEAQLSEIVLFEKRCRKRL 130
            E +E+SIS+LA EFDVTPRAIRFYE +GLLSP REGQRRIY+ RDRTRLKLTLRGKRLGL+LSEIRE++DMY+ GRDERPQL +FLAVL AHK  L QQ+ DIEAQLSEI  FEKR +K+L
Sbjct:    4 ERAEFSISDLAHEFDVTPRAIRFYEDQGLLSPRREGQRRIYTPRDRTRLKLTLRGKRLGLTLSEIRELIDMYEPGRDERPQLARFLAVLAAHKASLLQQQADIEAQLSEIQAFEKRVKKQL 124
[Close]
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Match: A0A1F3YHV5_9PROT (MerR family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YHV5_9PROT)

HSP 1 Score: 171 bits (434), Expect = 1.430e-52
Identity = 93/121 (76.86%), Postives = 104/121 (85.95%), Query Frame = 0 
Query:   10 EPSEYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIYSLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEAHKRQLEQQREDIEAQLSEIVLFEKRCRKRL 130
            E +E+SI ELA EFDVTPRAIRFYE  GLL+P R GQRRIYS RDRTRLKLTLRGKRLGL+LSEIRE++DMY+ GRDERPQL +FLAVLEAHK  L QQR DIEAQLSE+  FEKR R++L
Sbjct:    7 ERAEFSIGELAVEFDVTPRAIRFYEDHGLLAPKRAGQRRIYSPRDRTRLKLTLRGKRLGLTLSEIRELIDMYEPGRDERPQLARFLAVLEAHKANLLQQRADIEAQLSELQAFEKRIRRQL 127
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8866.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S8BAV8_9PROT9.770e-5778.51MerR family transcriptional regulator n=1 Tax=Beta... [more]
A0A1F4EX47_9PROT1.220e-5674.60MerR family transcriptional regulator n=1 Tax=Beta... [more]
A0A1F4F784_9PROT2.540e-5677.17MerR family transcriptional regulator n=6 Tax=uncl... [more]
A0A177QYB2_9PROT3.170e-5680.17MerR family transcriptional regulator n=1 Tax=Beta... [more]
A0A537D777_9PROT5.240e-5576.86MerR family DNA-binding transcriptional regulator ... [more]
A0A1F4B0P9_9PROT2.130e-5473.23MerR family transcriptional regulator n=1 Tax=Beta... [more]
A0A536XB43_9PROT2.400e-5371.43MerR family DNA-binding transcriptional regulator ... [more]
A0A536STP0_9PROT2.560e-5376.27MerR family DNA-binding transcriptional regulator ... [more]
A0A521Z4C3_9PROT3.190e-5376.86MerR family DNA-binding transcriptional regulator ... [more]
A0A1F3YHV5_9PROT1.430e-5276.86MerR family transcriptional regulator n=1 Tax=Beta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..125
NoneNo IPR availableGENE3D1.10.1660.10coord: 6..125
e-value: 2.7E-28
score: 100.2
NoneNo IPR availablePANTHERPTHR30204:SF58HTH-TYPE TRANSCRIPTIONAL REGULATOR YFMPcoord: 14..122
NoneNo IPR availablePANTHERPTHR30204REDOX-CYCLING DRUG-SENSING TRANSCRIPTIONAL ACTIVATOR SOXRcoord: 14..122
NoneNo IPR availableCDDcd04776HTH_GnyRcoord: 14..131
e-value: 4.05252E-55
score: 166.937
IPR000551MerR-type HTH domainSMARTSM00422merrmega3coord: 14..81
e-value: 3.1E-20
score: 83.2
IPR000551MerR-type HTH domainPFAMPF13411MerR_1coord: 14..79
e-value: 5.8E-16
score: 58.3
IPR000551MerR-type HTH domainPROSITEPS50937HTH_MERR_2coord: 13..80
score: 24.502453
IPR009061Putative DNA-binding domain superfamilySUPERFAMILY46955Putative DNA-binding domaincoord: 14..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8866contigP-wetherbeei_contig8866:573..1007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8866.2.1mRNA_P-wetherbeei_contig8866.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8866 573..1007 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8866.2.1 ID=prot_P-wetherbeei_contig8866.2.1|Name=mRNA_P-wetherbeei_contig8866.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp
MPAPDPKAAEPSEYSISELAREFDVTPRAIRFYEAEGLLSPAREGQRRIY
SLRDRTRLKLTLRGKRLGLSLSEIREIVDMYDTGRDERPQLEKFLAVLEA
HKRQLEQQREDIEAQLSEIVLFEKRCRKRLAEQKKAGGRGRRPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000551MerR-type_HTH_dom
IPR009061DNA-bd_dom_put_sf