prot_P-wetherbeei_contig8721.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8721.2.1
Unique Nameprot_P-wetherbeei_contig8721.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length351
Homology
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Match: A0A434UN84_9HYPH (Cytochrome c biogenesis protein CcdA n=1 Tax=Mesorhizobium sp. M7A.F.Ca.US.008.03.1.1 TaxID=2496742 RepID=A0A434UN84_9HYPH)

HSP 1 Score: 114 bits (285), Expect = 3.420e-26
Identity = 86/228 (37.72%), Postives = 125/228 (54.82%), Query Frame = 0
Query:  133 MSVVALLALFGAGVVASISPCSVPLLPGYL-LVAGDSS---ALERHERVRRLAA-----FVLAVVGTFVVLGAAAGSIGGIDLDPRILERIGGAVLLVLAAMLLVGL-----RGRGPRFALDPSFGR-WRAVALGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVVLAAAPWPAVRAWT--RRSGAALSHVSVGLMALLGIALIAGWYDRF 343
            +S + +LA F AG+++ +SPC +PL+PGY+  +AG S    + ER    R  AA     FVL     F+VLGA+A ++G + L  RI   + G V+++L  + L G+       R  RF  D   GR   A  LG+  A  WTPC+GP+LGA LT  AGS +V  G  LLA ++LG+  PF++ A       R     RR+G+ L   + G+M  +G+A+I G    F
Sbjct:    4 ISNIGVLAAFAAGIISFLSPCVLPLVPGYVSYIAGRSPMSMSAERPAAARWSAAGPSLCFVLGFSSVFIVLGASATALGQLALGYRIELNMVGGVIVILFGLFLTGVIRPTWMMREARFHADIPGGRAMSAYVLGLAFAFGWTPCIGPILGAILTVGAGSATVIDGVALLAIYSLGLGVPFLLAALFTDSLTRRLKAMRRTGSVLQIAAGGVMMAMGVAMITGQMSAF 231          
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Match: A0A535MJB8_9CHLR (Cytochrome c biogenesis protein CcdA n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535MJB8_9CHLR)

HSP 1 Score: 114 bits (284), Expect = 4.660e-26
Identity = 91/230 (39.57%), Postives = 118/230 (51.30%), Query Frame = 0
Query:  138 LLALFGAGVVASISPCSVPLLPGYLLVAGDSSALE------RHERVRRLAA----FVLAVVGTFVVLGAAAGSIGG-IDLDPRILERIGGAVLLVLAAMLLVGLRGR----GPRFALDPSF---GRWRAVALGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVVLAA--APWPAVRAWTRRSGAALSHVSVGLMALLGIALIAGWYDRFVALL 347
            L+A F AG+ + ++PCS+PLLP YL  AG  SA +      RH    RL      FV      FV+LG  AG +G  +    R +E +GGA ++VL   L   LR R    G R  L       G W A  LG   A  WTPCVGP L +ALT AA S     G++LLAA+A+G+ TPFV+ A   A  P V     R     +     L+A LG+ L++G Y R  +LL
Sbjct:    7 LIATFVAGLGSFLNPCSLPLLPAYLSYAGGISAADLVDPERRHRHRGRLVGGTLLFVAGFGAVFVLLGIGAGGLGRQVRQAERPVEIVGGAAMVVLGLALAGVLRSRWLERGRRLELPARLRGAGLWSAFPLGAVFAIGWTPCVGPYLASALTLAAVSSHAGTGAVLLAAYAVGLGTPFVLAALLYASMPDVGRRMARFAVPAARAGGVLVAALGVLLLSGQYTRLTSLL 236          
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Match: A0A2W6B4H7_9BACT (Cytochrome C biogenesis protein n=1 Tax=Candidatus Dormibacteraeota bacterium TaxID=2052315 RepID=A0A2W6B4H7_9BACT)

HSP 1 Score: 112 bits (280), Expect = 1.520e-25
Identity = 85/228 (37.28%), Postives = 127/228 (55.70%), Query Frame = 0
Query:  133 MSVVALLALFGAGVVASISPCSVPLLPGYL-LVAGDSSALERHERVRRLAAFVLAVVG---TFVVLGAAAGSIGGIDLDPRI-LERIGGAVLLVLAAMLL----VGLRGRGPRFALDPSFGR-WRAVALGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVVLAAAPWPAVRAWTR---RSGAALSHVSVGLMALLGIALIAGWYDRFVALL 347
            M+  +L   F AGV++ ISPC +PLLPGYL  ++G SS      + R L A +L V G    FV LGA A  +G + L  R+  E++ G  +L++A +LL    +GL  RG  +    + G+ W A  LG   A  WTPC+GP+LGA LT A  +  + +G  LLAA++LG+  P + L+ +  P VR+W R   R  A +     G +  +G+ L+    DR++ L+
Sbjct:    1 MNNTSLGVAFAAGVISIISPCCLPLLPGYLSYLSGVSSDQLAGNQRRTLLAALLFVAGFSMVFVALGATASEVGSLLLSYRLPAEQVAGLFILIVALVLLLDSRIGLLARGGDWTRWSTGGKLWTAPLLGAAFAITWTPCIGPVLGAVLTLAGSTADLHQGVALLAAYSLGLGLPILALSLS-LPKVRSWLRPLGRGSAIMQGAGGGFLVAMGLLLMT---DRWLPLI 224          
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Match: A0A1H7LKH7_9RHOB (Cytochrome c-type biogenesis protein n=1 Tax=Jannaschia helgolandensis TaxID=188906 RepID=A0A1H7LKH7_9RHOB)

HSP 1 Score: 112 bits (280), Expect = 1.790e-25
Identity = 89/228 (39.04%), Postives = 125/228 (54.82%), Query Frame = 0
Query:  133 MSVVALLALFGAGVVASISPCSVPLLPGYLLVAGDSSALERHERV---RRLAA------FVLAVVGTFVVLGAAAGSIGGIDLDPRI-LERIGGAVL----LVLAAMLLVGLRGRGPRFALDPSFGR-WRAVALGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVVLAAAPWPAVRAWTRR---SGAALSHVSVGLMALLGIALIAGWYDR 342
            +S + +LA F AG ++ +SPC +PL+PGY+        L R  RV    RL A      F+L     FV +GA A  +G + L  R  L  IGGA++    LV+  +  + +  R  RF LD   GR   A ALG+  A  WTPC+GP+LGA LT +A S ++  G  LL+ ++LG+  PF+ LAA    A+ A TRR   SG  L   + G+M L+GIA++ G   R
Sbjct:    4 ISGIGILAAFLAGAISFLSPCVLPLVPGYVSYIAGQPNLMRKRRVGIRARLGALGLSTCFILGFSSVFVAMGAGASMLGSLLLSWRTELNLIGGAIIVLFGLVMMGLFRLDIMTRDSRFNLDIPGGRPLGAYALGLAFAFGWTPCIGPVLGAILTLSASSANLSSGIWLLSIYSLGLAVPFL-LAALFTDAIAARTRRIGRSGRILYKGAGGVMVLMGIAVMTGQLSR 230          
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Match: A0A1H9X1W8_9RHOB (Cytochrome c-type biogenesis protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H9X1W8_9RHOB)

HSP 1 Score: 112 bits (280), Expect = 1.790e-25
Identity = 86/229 (37.55%), Postives = 124/229 (54.15%), Query Frame = 0
Query:  133 MSVVALLALFGAGVVASISPCSVPLLPGYLLVAGDSSALERHERVRRLA---------AFVLAVVGTFVVLGAAAGSIGGIDLDPRI-LERIGGAVL----LVLAAMLLVGLRGRGPRFALDPSFGR-WRAVALGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVVLAAAPWPAVRAWTRRSGAA---LSHVSVGLMALLGIALIAGWYDRF 343
            +S + + A F AG ++ +SPC +PL+PGY+        L   + V  LA          FVL     FV LGA A ++G + L  R  L  +GGA++    LV+  +L +G   R  RF LD   GR   A  LG+  A  WTPC+GP+LGA LT +A +GS+  G  LLA +++G+  PF+ LAA    A+ A  +R G A   L   + G+M L+G+A++ G   RF
Sbjct:    4 ISGIGVFAAFLAGAISFLSPCVLPLVPGYVSFIAGQPGLRTAQHVGMLARSRALGLSACFVLGFSTVFVALGAGASALGSLLLTWRTELNFVGGAIIVLFGLVMLGVLRIGGLARDTRFHLDVPGGRPIGAYVLGLAFAFGWTPCIGPILGAILTVSASAGSLSNGVWLLAIYSIGLGVPFL-LAALFTDAIAARVKRIGQAGRWLYRGAGGVMVLMGLAIMTGQLSRF 231          
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Match: UPI000B4C1E22 (cytochrome C biogenesis protein n=2 Tax=unclassified Kineosporia TaxID=2626061 RepID=UPI000B4C1E22)

HSP 1 Score: 112 bits (279), Expect = 1.800e-25
Identity = 95/224 (42.41%), Postives = 116/224 (51.79%), Query Frame = 0
Query:  133 MSVVALLALFGAGVVASISPCSVPLLPGYLLVAGDSSALERHERVRRLAAFVLAVVG---TFVVLGAAAGSIGGIDLDPRILERIGGAVLLVLAAMLLVGLRGRG----PRFALDP----SFGRW-RAVALGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVVLAAAPWPAVRAW---TRRSGAAL---SHVSVGLMALLGIALIAG 338
            MS  A +ALFGAGV    +PC +PLLP Y+ V  D++A  R  R   L A +  V G    FV LG AAG++G I     +L R+  AVL+ +   L V LR RG    P   L P      GRW R  ALG   A  WTPCVGPLLGAAL  A   G    G+ LLA ++ G+  PF+VL  A  P V       RR G        V+ GL+ LLG+ L  G
Sbjct:    1 MSGYAYVALFGAGVSTVAAPCVLPLLPAYVTVVLDAAA--RGGRAAVLGAGLAFVGGFSLVFVALGTAAGALGAIPGSQVVLTRVAAAVLVAVG--LAVVLRPRGLSWWPTLRLLPWTGAGRGRWLRPFALGTAFAGTWTPCVGPLLGAALVTAGAGGDPLDGAGLLAVYSAGLSVPFLVLCLAAGPLVGTLPGLARRLGRGALVAQRVAGGLLVLLGLLLADG 220          
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Match: A0A7Z0MGZ5_9BURK (Cytochrome C biogenesis protein n=3 Tax=Alcaligenaceae TaxID=506 RepID=A0A7Z0MGZ5_9BURK)

HSP 1 Score: 111 bits (278), Expect = 3.630e-25
Identity = 83/230 (36.09%), Postives = 122/230 (53.04%), Query Frame = 0
Query:  133 MSVVALLALFGAGVVASISPCSVPLLPGYL-LVAGDSSA---------LERHERVRRLAAFVLAVVGTFVVLGAAAGSIGGIDLDPRILERIGGAVLLVLAAMLLVGL------RGRGPRFALDPSFGR-WRAVALGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVVLAAAPWPAVRAWT--RRSGAALSHVSVGLMALLGIALIAGWYDRF 343
            +S V LL  F AG+ + +SPC +PL+PGYL  VAG + A         L R   +   A FVL     F++LGA+  +IG + L  R    I   V++ LA ++++G+        R  RF      G  W A  LGV     WTPC+GP+LG+ L  +A S SV  G++LL  +ALG+  PF++ A    P +   +  RR+G  L  V+  ++ L+GIA+ +G   RF
Sbjct:    4 LSTVGLLTAFVAGIASFLSPCVLPLVPGYLSFVAGGAVAPTASPMEVRLRRWRTLGLSACFVLGFSSVFLILGASITAIGRLFLSYRYELNIAAGVIIALAGLMIMGVVRTPLWAQRYYRFESSVKGGNPWSATLLGVAFGFGWTPCIGPVLGSILVLSATSESVGHGTVLLGVYALGLGVPFLLSAFFMTPFMHRLSALRRTGRYLQLVTGAILVLMGIAVASGQLVRF 233          
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Match: UPI001BDF02B0 (cytochrome c biogenesis protein CcdA n=1 Tax=Mesorhizobium sp. dw_380 TaxID=2812001 RepID=UPI001BDF02B0)

HSP 1 Score: 109 bits (273), Expect = 1.730e-24
Identity = 80/226 (35.40%), Postives = 125/226 (55.31%), Query Frame = 0
Query:  133 MSVVALLALFGAGVVASISPCSVPLLPGYL-LVAGDSSALERHERVRRLAA------FVLAVVGTFVVLGAAAGSIGGIDLDPRI-LERIGGAVLLVLAAMLLVGLRGRGPRF-----ALDPSFGRWRAVALGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVVLAAAPWPAVRAWT--RRSGAALSHVSVGLMALLGIALIAGWYDRF 343
            +S +++LA F AG+V+ +SPC +PL+PGY+  VAG ++     +R  RL+       FVL     FVVLGA+A ++G + L  R+ L  +GGAV+++    L+  +R     +     A  P      A ALG+  A  WTPC+GP+LG+ LT  A S +V  G+ LLA ++LG+  PF++ A       R     R++G  L   +  +M ++G+A+I G    F
Sbjct:    4 ISNISVLAAFAAGIVSFLSPCVLPLVPGYVSYVAGRTTTDVLADRATRLSTVGLSLCFVLGFSTVFVVLGASATALGRLLLSYRVELNLVGGAVVMLFGVFLIGLIRPNWMMYEARFHATAPGGRAISAYALGLAFAFGWTPCIGPILGSILTVGAASATVAEGAALLAIYSLGLGVPFLLAALFTDSLTRRMKAMRQTGRLLQPAAGAIMVVMGLAMITGQMSTF 229          
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Match: A0A7C2HXJ5_9FIRM (Cytochrome c biogenesis protein CcdA n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C2HXJ5_9FIRM)

HSP 1 Score: 109 bits (272), Expect = 2.290e-24
Identity = 90/222 (40.54%), Postives = 121/222 (54.50%), Query Frame = 0
Query:  133 MSVVALLALFGAGVVASISPCSVPLLPGYLLVAGDSSALERHERVRR------LAAFVLAVVG---TFVVLGAAAGSIGGIDLDPRI-LERIGGAV-----LLVLAAMLLVGL-RGRGPRFALDPSFGRWRAVALGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVVLAAAPWPAVRA--WTRRSGAALSHVSVGLMALLGIALI 336
            M+ V+L+  F AGV+  +SPC VPL+PGYL      S  E     RR      L+A  L V+G    F  LGA+A ++G   LD R+ L R+GG V     L VL  + + GL R R  + A  P  G   AV +G+    AWTPCVGP+L   LT AA +     G++LL A++LG+  PF+V AA    AV A  W RR G A+   S G + ++G A+I
Sbjct:    1 MTEVSLILAFVAGVLGFVSPCIVPLIPGYLSFVSGVSLGEMDLAARRAKLGQVLSATALFVLGFSIIFTALGASASALGSFVLDNRVALGRVGGIVVVLLGLTVLGVVRVPGLYRERRLQMARRPG-GLLGAVPVGMAFGFAWTPCVGPVLAGILTLAASAQGAGGGALLLFAYSLGLGIPFLVAAALITTAVDATGWFRRHGRAVEVFSGGFLVVMGAAMI 221          
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Match: A0A5Q4GGS0_9DEIN (Cytochrome c biogenesis protein CcdA n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A5Q4GGS0_9DEIN)

HSP 1 Score: 108 bits (270), Expect = 3.870e-24
Identity = 81/223 (36.32%), Postives = 118/223 (52.91%), Query Frame = 0
Query:  142 FGAGVVASISPCSVPLLPGYLLVAGDSSALERHERVRRLAAFVLAVVGTFVVLGAAAGSIGGIDLDPRILERIGGAVLLVLAAMLLVG-----LRGRGPRFALDPSFGR---WRAVALGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVVLAAAPWPAVRA---------WTRRSGAALSHVSVGLMALLGIALIAGWYDRFVALL 347
            F AGV++ +SPC +PL+P YL   G S A +R   +R  A FVL     F+ +GA+A ++G I  + R +  I G VL++   ++++G     L  R  R  L         W AVALG   A AWTPC+GP+LGA LT A  SG++  G  LLA ++LG+  PF++ A A  P +R          W  R       V+ GL+ ++GI ++ G +     LL
Sbjct:    9 FVAGVLSFLSPCVLPLVPTYLAYIGGSGAAKRALVLRNAALFVLGFSLVFIAMGASASALGSILREHRSVLMIVGGVLVIAFGLVMLGVIRLPLLYRDTRRPLGADANPQTPWGAVALGSAFAFAWTPCIGPVLGAILTIAGASGTLTTGVGLLAVYSLGLAVPFMLAALAFEPFLRMSRGLRPYLPWFER-------VAGGLLVIVGIMMVTGTFTALNNLL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8721.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A434UN84_9HYPH3.420e-2637.72Cytochrome c biogenesis protein CcdA n=1 Tax=Mesor... [more]
A0A535MJB8_9CHLR4.660e-2639.57Cytochrome c biogenesis protein CcdA n=2 Tax=Chlor... [more]
A0A2W6B4H7_9BACT1.520e-2537.28Cytochrome C biogenesis protein n=1 Tax=Candidatus... [more]
A0A1H7LKH7_9RHOB1.790e-2539.04Cytochrome c-type biogenesis protein n=1 Tax=Janna... [more]
A0A1H9X1W8_9RHOB1.790e-2537.55Cytochrome c-type biogenesis protein n=4 Tax=Alpha... [more]
UPI000B4C1E221.800e-2542.41cytochrome C biogenesis protein n=2 Tax=unclassifi... [more]
A0A7Z0MGZ5_9BURK3.630e-2536.09Cytochrome C biogenesis protein n=3 Tax=Alcaligena... [more]
UPI001BDF02B01.730e-2435.40cytochrome c biogenesis protein CcdA n=1 Tax=Mesor... [more]
A0A7C2HXJ5_9FIRM2.290e-2440.54Cytochrome c biogenesis protein CcdA n=1 Tax=Firmi... [more]
A0A5Q4GGS0_9DEIN3.870e-2436.32Cytochrome c biogenesis protein CcdA n=1 Tax=Truep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003834Cytochrome C biogenesis protein, transmembrane domainPFAMPF02683DsbDcoord: 142..336
e-value: 4.2E-20
score: 72.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..59
NoneNo IPR availablePANTHERPTHR31272:SF4CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATEDcoord: 134..339
NoneNo IPR availablePANTHERPTHR31272CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATEDcoord: 134..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8721contigP-wetherbeei_contig8721:1658..2710 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8721.2.1mRNA_P-wetherbeei_contig8721.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8721 1658..2710 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8721.2.1 ID=prot_P-wetherbeei_contig8721.2.1|Name=mRNA_P-wetherbeei_contig8721.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp
DRRRPARPRGARRVLDLRVHQLPAHAAVHEGVARALHRRRSDRGHRAQPG
VRFRGRSGERRRLRARARPALPRCARSRHGDLAGMGHPCVADDPAVRQRW
TAPPAARRRGRLRPDRGSDPHAPGRGRRQPTGMSVVALLALFGAGVVASI
SPCSVPLLPGYLLVAGDSSALERHERVRRLAAFVLAVVGTFVVLGAAAGS
IGGIDLDPRILERIGGAVLLVLAAMLLVGLRGRGPRFALDPSFGRWRAVA
LGVGTAAAWTPCVGPLLGAALTAAAGSGSVWRGSILLAAFALGVLTPFVV
LAAAPWPAVRAWTRRSGAALSHVSVGLMALLGIALIAGWYDRFVALLPVD
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003834Cyt_c_assmbl_TM_dom