prot_P-wetherbeei_contig8714.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8714.1.1
Unique Nameprot_P-wetherbeei_contig8714.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length180
Homology
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Match: D7FR30_ECTSI (Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR30_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 1.870e-82
Identity = 123/176 (69.89%), Postives = 141/176 (80.11%), Query Frame = 0
Query:    3 FDRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPRDDERAIAKVFLSEFADAHRSANNAPPCNLTPEPPLELQGLRVDGSTKPVGYLSFVIFTQHVEEGRKEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVATLLQVLNRAIPGDEEKEKKTAQGRSFAR 178
            FDRAF AL  G   ++P  ++PWRK E VY+VPQADRVTVIFA+DF   DERAIAK FL EF DA R ANN+PPC  TP+ PLEL+ + +  S  PVG+LSFVIF QHV+ GR+EKTITLLTGFRNYLHYHLKATKTYMHMRMRKRV  LLQVLNRA+P +E K KKTA+GR+F R
Sbjct:    5 FDRAFDALREGRGGSVPPAAIPWRKNEVVYVVPQADRVTVIFAIDFTESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDAPLELKSMPMPPSHTPVGFLSFVIFPQHVDRGRQEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLNRAVPEEEAKAKKTAKGRTFNR 180          
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Match: A0A835ZH76_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH76_9STRA)

HSP 1 Score: 249 bits (636), Expect = 5.180e-82
Identity = 124/177 (70.06%), Postives = 146/177 (82.49%), Query Frame = 0
Query:    3 FDRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPRDDERAIAKVFLSEFADAHRSANNAPPCNLTPEPPLELQGLRVDGSTKPVGYLSFVIFTQHVEEGRKEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVATLLQVLNRAIPGDEEKEKKTAQGRSFARS 179
            F +AF +LL G++ ++P+M+LPWRK+E V+IVPQADRVTVIFA+DF   DERA+ KVFL EFADA RSANNAPP N   E PLEL+  RV G  KPVG+LSF+IF QHV+EGR E  +TLLTGFRNYLHYH+KATKTYMHMRMRKRV  LLQVLNRA+P  EEK KKTAQG++F R+
Sbjct:    6 FTKAFASLLGGQSGSLPMMTLPWRKSEDVFIVPQADRVTVIFALDFAEQDERALCKVFLMEFADAQRSANNAPPTNFALEAPLELRSARVRG--KPVGFLSFIIFPQHVQEGRLESCVTLLTGFRNYLHYHIKATKTYMHMRMRKRVVGLLQVLNRAVPEAEEKAKKTAQGKTFVRA 180          
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Match: A0A6H5L1H1_9PHAE (Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H1_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 9.330e-80
Identity = 121/176 (68.75%), Postives = 141/176 (80.11%), Query Frame = 0
Query:    3 FDRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPRDDERAIAKVFLSEFADAHRSANNAPPCNLTPEPPLELQGLRVDGSTKPVGYLSFVIFTQHVEEGRKEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVATLLQVLNRAIPGDEEKEKKTAQGRSFAR 178
            FDRAF AL  G   ++P  ++PWRK E VY+VPQADRVT+IFA+DF   DERAIAK FL EF DA R ANN+PPC  TP+ PLEL+ + +  S  PVG+LSFVIF QHV+ GR+EKTITLLTGFRNYLHYHLKATKTYMHMRMRKRV  LLQVL+RA+P +E K KKTA+GR+F R
Sbjct:  131 FDRAFDALREGRGGSVPPAAIPWRKNEVVYVVPQADRVTIIFAIDFTESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDAPLELKSMPMPPSHTPVGFLSFVIFPQHVDRGRQEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVVGLLQVLSRAVPEEEAKAKKTAKGRTFNR 306          
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Match: T0RSJ4_SAPDV (Arp2/3 complex 34 kDa subunit n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RSJ4_SAPDV)

HSP 1 Score: 178 bits (452), Expect = 1.870e-52
Identity = 91/180 (50.56%), Postives = 128/180 (71.11%), Query Frame = 0
Query:    3 FDRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPRDDERAIAKVFLSEFADAHRSANNAPPCNLTPEPPLELQGL-RVDGSTKPVGYLSFVIFTQHVE-EGRKEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVATLLQVLNRAIPGDEEKE--KKTAQGRSFAR 178
            FD  F AL    +S++  + +P+R+ ET+Y++PQADR+ ++F+V F    ++AIA++FL EFA+A R  NNAPP +   +PPLEL+G+  +  ST  VGYLSF IF  H++ + ++ K  TL+ GFRNYLHYH+KA+KTYMH+RMRKRV  LLQVLNRA P  +  +  KKT  G++F R
Sbjct:  123 FDHCFLALHADASSSLSPIQIPFRRQETIYVLPQADRIVIVFSVAFQDKTDQAIARIFLQEFAEARRHVNNAPPVSFGKDPPLELRGVPNLRQSTDHVGYLSFAIFKTHIDTDAKRAKACTLIQGFRNYLHYHIKASKTYMHIRMRKRVDLLLQVLNRAQPAKDPSKATKKTITGKTFDR 302          
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Match: A0A067CQD1_SAPPC (Arp2/3 complex 34 kDa subunit n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQD1_SAPPC)

HSP 1 Score: 178 bits (451), Expect = 2.650e-52
Identity = 91/180 (50.56%), Postives = 128/180 (71.11%), Query Frame = 0
Query:    3 FDRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPRDDERAIAKVFLSEFADAHRSANNAPPCNLTPEPPLELQGL-RVDGSTKPVGYLSFVIFTQHVE-EGRKEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVATLLQVLNRAIPGDEEKE--KKTAQGRSFAR 178
            FD  F AL    +S++  + +P+R+ ET+Y++PQADR+ ++F+V F    ++AIA++FL EFA+A R  NNAPP +   +PPLEL+G+  +  ST  VGYLSF IF  H++ + ++ K  TL+ GFRNYLHYH+KA+KTYMH+RMRKRV  LLQVLNRA P  +  +  KKT  G++F R
Sbjct:  123 FDHCFLALHADASSSLSPIQIPFRRQETIYVLPQADRIVIVFSVAFQDKTDQAIARIFLQEFAEARRHVNNAPPVSFGKDPPLELRGVPNLRQSTDHVGYLSFAIFKTHIDSDAKRAKACTLVQGFRNYLHYHIKASKTYMHIRMRKRVDLLLQVLNRAQPAKDPSKATKKTITGKTFDR 302          
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Match: A0A7S2AY13_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AY13_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.010e-51
Identity = 88/181 (48.62%), Postives = 126/181 (69.61%), Query Frame = 0
Query:    3 FDRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPRDDERAIAKVFLSEFADAHRSANNAPPC--NLTPEPPLELQGLRVDGSTKPVGYLSFVIFTQHVE-EGRKEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVATLLQVLNRAI-PGDEEKEKKTAQGRSFARS 179
            F +AF  L  G  S++PLM+L WR  E ++I P   R TV++AV+FP + ++AIA+V L +FA      N APPC  N   +PP+E++ L +D  T   G+L+FV+F  H+  E + +K++ LL+GFRNYLHYH+KA+KTY+HMRMRK+V T LQVLNRA+   D  +EKKT+ G++F R+
Sbjct:   46 FTKAFNGLKDGTGSSLPLMTLDWRPGEAIWIKPADQRCTVVYAVNFPEETDKAIARVMLQQFAKESAKINGAPPCSYNEPDKPPMEVRDLPMDQYTHCCGFLTFVVFPAHISSEAKFDKSVALLSGFRNYLHYHIKASKTYLHMRMRKKVQTWLQVLNRAVHEQDTPQEKKTSSGKTFKRA 226          
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Match: G4Z955_PHYSP (Arp2/3 complex 34 kDa subunit n=30 Tax=Peronosporaceae TaxID=4777 RepID=G4Z955_PHYSP)

HSP 1 Score: 174 bits (440), Expect = 1.160e-50
Identity = 91/181 (50.28%), Postives = 125/181 (69.06%), Query Frame = 0
Query:    3 FDRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPRDDERAIAKVFLSEFADAHRSANNAPPCNLTPEPPLELQGLR-VDGSTKPVGYLSFVIFTQHVEEGRKE-KTITLLTGFRNYLHYHLKATKTYMHMRMRKRVATLLQVLNRAIPGDEEK--EKKTAQGRSFARS 179
            F++ F AL  G AS++  + +P+R+ ET+Y++PQADR+ ++++V F    ++AIA+VFL EF D  R+ NNAPP     +PPLEL+G   +  S   VGYLS  IF  HV+   K  K  TL+ G RNYLHYH+KA+KTY+H+RMRKRV  LLQVLNRA P  ++   +KKT  GR+FAR+
Sbjct:  123 FEQCFEALQNGNASSLGPVQIPYRRNETIYVLPQADRIVIVYSVCFDDKTDQAIARVFLQEFVDTRRTVNNAPPVAFGKDPPLELRGAPGLRNSPDLVGYLSIAIFPTHVDTTEKRIKAATLVQGLRNYLHYHIKASKTYLHIRMRKRVDLLLQVLNRARPEKDQSKTQKKTITGRTFARA 303          
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Match: A0A024GEA7_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GEA7_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.640e-50
Identity = 92/181 (50.83%), Postives = 125/181 (69.06%), Query Frame = 0
Query:    3 FDRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPRDDERAIAKVFLSEFADAHRSANNAPPCNLTPEPPLELQGL-RVDGSTKPVGYLSFVIFTQHVEEGRK-EKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVATLLQVLNRAIPGDEEKE--KKTAQGRSFARS 179
            F++ F AL  G A+A+  + +P+R+ E +YI+PQ+DRV V+F+V F    ++AIA+VFL E  D+ R+ NNAPP     +PPLEL+G   + G    VGYLSF IFT H++   K EK  T+L GFRNYLHYH+K +KTY+H+RMRKRV  LLQVLNR+ P  +  +  KKT  GR+F R+
Sbjct:  123 FEQCFQALKAGSAAALGAIQIPFRRYECIYILPQSDRVVVVFSVFFEDKTDQAIARVFLQELVDSRRAVNNAPPVAFNKDPPLELRGASNLHGGKGLVGYLSFAIFTGHIDTIEKCEKAATMLQGFRNYLHYHIKCSKTYLHIRMRKRVDLLLQVLNRSRPERDPAKVTKKTITGRTFVRA 303          
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Match: A0A484E080_BRELC (Arp2/3 complex 34 kDa subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E080_BRELC)

HSP 1 Score: 173 bits (438), Expect = 2.320e-50
Identity = 92/181 (50.83%), Postives = 124/181 (68.51%), Query Frame = 0
Query:    3 FDRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPRDDERAIAKVFLSEFADAHRSANNAPPCNLTPEPPLELQGLR-VDGSTKPVGYLSFVIFTQHVEEGRKE-KTITLLTGFRNYLHYHLKATKTYMHMRMRKRVATLLQVLNRAIPGDEEK--EKKTAQGRSFARS 179
            F++ F AL  G AS +  + +P+R+ ETVY++PQADR+ ++++V F    ++AIA+VFL EF D  R+ NNAPP     +PPLEL+G   +  S   VGYLS  IF  HV+   K  K  TL+ G RNYLHYH+KA+KTY+H+RMRKRV  LLQVLNRA P  ++   +KKT  GR+FAR+
Sbjct:  123 FEQCFAALQSGNASTLGAVQIPFRRNETVYVLPQADRIVIVYSVCFDDKTDQAIARVFLQEFVDTRRTVNNAPPVAFGRDPPLELRGAPGLCQSPDLVGYLSLAIFPTHVDTAEKRIKAATLVQGLRNYLHYHIKASKTYLHIRMRKRVDLLLQVLNRARPEKDQTKTQKKTITGRTFARA 303          
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Match: A0A024U441_9STRA (Arp2/3 complex 34 kDa subunit n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U441_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.380e-50
Identity = 93/181 (51.38%), Postives = 125/181 (69.06%), Query Frame = 0
Query:    4 DRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPRDDERAIAKVFLSEFADAHRSANNAPPCNLTPEPPLELQ---GLRVDGSTKPVGYLSFVIFTQHVE-EGRKEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVATLLQVLNRAIPGDE--EKEKKTAQGRSFAR 178
            D  F AL  G+A  +  + +P+R+ ET+YI+PQ DR+ ++F+V F    ++AIA+VFL EFA+A R  NNAPP +   +PPLEL+   GLR       VGYLSF IF  H++ + ++EK  TLL GFRNYLHYH+KA+KTY+H+RMRKRV  LLQVLNRA P  +  +  KKT  G++F R
Sbjct:  124 DHCFLALHAGQAKVLSPIQIPFRRQETIYILPQDDRIVIVFSVAFQDKTDQAIARVFLQEFAEARRHVNNAPPVSFGKDPPLELRAVSGLRP--CADHVGYLSFAIFKSHIDTDAKREKACTLLQGFRNYLHYHIKASKTYLHIRMRKRVDLLLQVLNRAQPPKDPTKTSKKTITGKTFDR 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8714.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR30_ECTSI1.870e-8269.89Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus s... [more]
A0A835ZH76_9STRA5.180e-8270.06Arp2/3 complex 34 kDa subunit n=1 Tax=Tribonema mi... [more]
A0A6H5L1H1_9PHAE9.330e-8068.75Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus s... [more]
T0RSJ4_SAPDV1.870e-5250.56Arp2/3 complex 34 kDa subunit n=1 Tax=Saprolegnia ... [more]
A0A067CQD1_SAPPC2.650e-5250.56Arp2/3 complex 34 kDa subunit n=3 Tax=Saprolegniac... [more]
A0A7S2AY13_9STRA2.010e-5148.62Arp2/3 complex 34 kDa subunit n=1 Tax=Florenciella... [more]
G4Z955_PHYSP1.160e-5050.28Arp2/3 complex 34 kDa subunit n=30 Tax=Peronospora... [more]
A0A024GEA7_9STRA1.640e-5050.83Arp2/3 complex 34 kDa subunit n=1 Tax=Albugo candi... [more]
A0A484E080_BRELC2.320e-5050.83Arp2/3 complex 34 kDa subunit n=1 Tax=Bremia lactu... [more]
A0A024U441_9STRA2.380e-5051.38Arp2/3 complex 34 kDa subunit n=4 Tax=Aphanomyces ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007188Actin-related protein 2/3 complex subunit 2PFAMPF04045P34-Arccoord: 17..161
e-value: 3.0E-49
score: 167.9
IPR007188Actin-related protein 2/3 complex subunit 2PANTHERPTHR12058ARP2/3 COMPLEX 34 KDA SUBUNITcoord: 3..178
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 9..179
e-value: 4.8E-66
score: 223.6
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 19..159
NoneNo IPR availablePANTHERPTHR12058:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2coord: 3..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8714contigP-wetherbeei_contig8714:344..2298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8714.1.1mRNA_P-wetherbeei_contig8714.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8714 344..2298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8714.1.1 ID=prot_P-wetherbeei_contig8714.1.1|Name=mRNA_P-wetherbeei_contig8714.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp
MCFDRAFTALLRGEASAIPLMSLPWRKTETVYIVPQADRVTVIFAVDFPR
DDERAIAKVFLSEFADAHRSANNAPPCNLTPEPPLELQGLRVDGSTKPVG
YLSFVIFTQHVEEGRKEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVA
TLLQVLNRAIPGDEEKEKKTAQGRSFARS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007188ARPC2
IPR034666ARPC2/4