prot_P-wetherbeei_contig871.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig871.5.1
Unique Nameprot_P-wetherbeei_contig871.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length97
Homology
BLAST of mRNA_P-wetherbeei_contig871.5.1 vs. uniprot
Match: A0A835Z826_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z826_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 6.090e-17
Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 0
Query:   11 PLVSARASDFRRQVQNYTKTLLESMGALIREAKVP-TQQAAQSPFQINVATAEIITSAEGLLRLIRELKLSILLQDFEAMDAEVDA 95
            P VS RA DFRR      ++L+E+ GALIR +K+   Q       QI+ A+  ++T+ E +LRLI+ELKLSILLQDFEAMD EVDA
Sbjct:   39 PPVSGRAHDFRRACDRNARSLVENFGALIRLSKISDAQHMTHEGLQIDTASTALVTAGETMLRLIQELKLSILLQDFEAMDDEVDA 124          
BLAST of mRNA_P-wetherbeei_contig871.5.1 vs. uniprot
Match: F4Q5N9_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q5N9_CAVFA)

HSP 1 Score: 55.1 bits (131), Expect = 1.180e-6
Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   20 FRRQVQNYTKTLLESMGALIREAKV-PTQQAAQSPFQINVATAEIITSAEGLLRLIRELKLSILLQDFEAMDAEVDAAN 97
            F++Q++  T  +L+S   +I+ +K+  + Q     FQ+   T  I+ SAEGLLR+I ELK +I+L DF  M  EV   N
Sbjct:   35 FQKQIETKTNQMLDSFHEIIKISKINDSPQNVSEVFQMETNTTSILNSAEGLLRIIEELKQNIILNDFSNMMEEVRVQN 113          
BLAST of mRNA_P-wetherbeei_contig871.5.1 vs. uniprot
Match: D3AXG1_POLPP (Putative mediator complex subunit 22 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AXG1_POLPP)

HSP 1 Score: 51.6 bits (122), Expect = 1.020e-5
Identity = 28/79 (35.44%), Postives = 46/79 (58.23%), Query Frame = 0
Query:   20 FRRQVQNYTKTLLESMGALIREAKV-PTQQAAQSPFQINVATAEIITSAEGLLRLIRELKLSILLQDFEAMDAEVDAAN 97
            F++Q+   T  +L++  ++I+ +KV    Q     +++   T  I+ SAEGLL++I ELK +I+L DF  M  EV   N
Sbjct:   48 FQKQIDTKTNQMLDNFHSIIKISKVNENSQNFSEMYEMETRTTNILNSAEGLLKIIEELKQNIILNDFSTMTEEVRLQN 126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig871.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z826_9STRA6.090e-1753.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F4Q5N9_CAVFA1.180e-639.24Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
D3AXG1_POLPP1.020e-535.44Putative mediator complex subunit 22 n=1 Tax=Polys... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009332Mediator of RNA polymerase II transcription subunit 22PFAMPF06179Med22coord: 23..95
e-value: 1.8E-12
score: 47.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig871contigP-wetherbeei_contig871:6240..6628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig871.5.1mRNA_P-wetherbeei_contig871.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig871 6240..6628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig871.5.1 ID=prot_P-wetherbeei_contig871.5.1|Name=mRNA_P-wetherbeei_contig871.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=97bp
MASSIAAPPAPLVSARASDFRRQVQNYTKTLLESMGALIREAKVPTQQAA
QSPFQINVATAEIITSAEGLLRLIRELKLSILLQDFEAMDAEVDAAN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009332Med22