prot_P-wetherbeei_contig8647.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Match: A0A835YVP5_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP5_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.140e-53 Identity = 81/121 (66.94%), Postives = 102/121 (84.30%), Query Frame = 0
Query: 1 MSVTGKSGVGMPIILMHDAEGAICTIETKGGEVYRGILDESEDNMNITMKDVVVTNPRGKEARLRRVYIRGSQILFVIVPDLLSKAPMFKRIALWRKYKGNPPSFAATGPRGAAAAIIRRA 121
MSVTG +G+GMP+IL+HDAEGA+CT+E K GEVYRGILDE+EDNMNI MKD++ T+ RGK + L ++YIRGSQI+ VIVPD+L +A MFKRI +WRKYKGNPPS A++ G AAI+R+A
Sbjct: 1 MSVTGNAGIGMPVILLHDAEGAVCTVEVKSGEVYRGILDEAEDNMNILMKDILKTDVRGKTSTLSKMYIRGSQIVLVIVPDMLRRAAMFKRIVMWRKYKGNPPSLASSANTGQRAAILRKA 121
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Match: A0A6U1QDM6_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QDM6_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.970e-50 Identity = 79/121 (65.29%), Postives = 96/121 (79.34%), Query Frame = 0
Query: 1 MSVTGKSGVGMPIILMHDAEGAICTIETKGGEVYRGILDESEDNMNITMKDVVVTNPRGKEARLRRVYIRGSQILFVIVPDLLSKAPMFKRIALWRKYKGNPPSFAATGPRGAAAAIIRRA 121
MSVTGK GVG+PII++HDAEG I T+E K GE YRG+LDE+EDNMN + DV T P GK +++ ++Y+RGSQI FV+VPD L K PMFKRI +WRKYKGNPPS + PRG AAAIIR+A
Sbjct: 1 MSVTGKRGVGIPIIMLHDAEGCIVTVELKNGETYRGLLDEAEDNMNCILVDVTKTTPMGKISKVDQLYVRGSQISFVVVPDTLQKGPMFKRIQMWRKYKGNPPSLGSVVPRGQAAAIIRKA 121
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Match: I2CSB6_NANGC (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSB6_NANGC) HSP 1 Score: 157 bits (396), Expect = 1.340e-45 Identity = 73/120 (60.83%), Postives = 96/120 (80.00%), Query Frame = 0
Query: 1 MSVTGKSGVGMPIILMHDAEGAICTIETKGGEVYRGILDESEDNMNITMKDVVVTNPRGKEARLRRVYIRGSQILFVIVPDLLSKAPMFKRIALWRKYKGNPPSFAATGPRGAAAAIIRR 120
MSVTGK GVG+PIIL+HDAEG I T+ET+ GE+YRG+LDE+EDNMN+ ++DV TN GKE+++ +YI+GSQ+ F+I+PD+L KAPMFKRI +W+KY GN P A G RG AA I ++
Sbjct: 1 MSVTGKGGVGIPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILRDVTKTNVHGKESKVELIYIKGSQVNFMILPDMLKKAPMFKRIKVWKKYHGNVPELGA-GVRGQAAVISQK 119
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Match: A0A7S3K1R1_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1R1_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.550e-42 Identity = 71/121 (58.68%), Postives = 90/121 (74.38%), Query Frame = 0
Query: 1 MSVTGKSGVGMPIILMHDAEGAICTIETKGGEVYRGILDESEDNMNITMKDVVVTNPRGKEARLRRVYIRGSQILFVIVPDLLSKAPMFKRIALWRKYKGNPPSFAATGPRGAAAAIIRRA 121
MSVTGK G+G+PIILMHD EG I T+E K G++YRG LDE+EDNMN MKDV T+ GK++++ ++IRGSQILF + P +L KAPMFKR+ WRK++GN RG AAAIIR+A
Sbjct: 18 MSVTGKRGIGVPIILMHDGEGTIVTVECKNGDMYRGFLDETEDNMNCIMKDVTKTSAEGKKSQIEHIFIRGSQILFFVFPTMLKKAPMFKRVRTWRKHRGNISKGEEA--RGQAAAIIRKA 136
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Match: A0A6H5L429_9PHAE (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L429_9PHAE) HSP 1 Score: 145 bits (365), Expect = 4.230e-41 Identity = 69/111 (62.16%), Postives = 88/111 (79.28%), Query Frame = 0
Query: 11 MPIILMHDAEGAICTIETKGGEVYRGILDESEDNMNITMKDVVVTNPRGKEARLRRVYIRGSQILFVIVPDLLSKAPMFKRIALWRKYKGNPPSFAATGPRGAAAAIIRRA 121
MPIIL+HDAEG I T+E K GEV RG+LDE+ED+MN+ +KD V TN RGK + L+++YIRG+QI+F IVP++L APMF RI WRKYKG+PP A+ G +G AAIIR+A
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRGKTSTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRKA 111
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Match: A0A6U4H9R4_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4H9R4_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.000e-40 Identity = 75/149 (50.34%), Postives = 99/149 (66.44%), Query Frame = 0
Query: 1 MSVTGKSGVGMPIILMHDAEGAICTIETKGGEVYRGILDESEDNMNITMKDVVVTNPRGKEARLRRVYIRGSQILFVIVPDLLSKAPMFKRIALWRKYKGNPPSFAATGPRGAAAAIIRRA----------GPQPGRGVPAGGRPPPSA 139
MSVTGK G+G+P IL++DAEG + T+ETK G++YRG+L +SED MN+TM+ V + G E+ +Y+RG+Q+ VIVPD+L KAP F+R+ W++YKGNPPS T RG AAAIIR+ GP P G P G PP A
Sbjct: 1 MSVTGKRGIGVPGILLYDAEGTVVTVETKNGDLYRGLLTDSEDTMNLTMQQVHKRHADGTESTADLLYLRGNQVAMVIVPDMLCKAPAFQRVMRWKEYKGNPPSLGTTEARGQAAAIIRKTQEKRRSMGLGGPDPAGGPPRG---PPGA 146
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Match: F0W7K3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7K3_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.610e-40 Identity = 69/126 (54.76%), Postives = 89/126 (70.63%), Query Frame = 0
Query: 1 MSVTGKSGVGMPIILMHDAEGAICTIETKGGEVYRGILDESEDNMNITMKDVVVTNPRGKEARLRRVYIRGSQILFVIVPDLLSKAPMFKRIALWRKYKGNPPSFA-----ATGPRGAAAAIIRRA 121
M+VTGK GVG+P IL+HD EG +IE K GE+YRG L+E+EDNMN +K+ + T+ G + VY+RGSQILF++ PD+L APMFKR+ LW+K+KG PS GPRG AAAIIR+A
Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTTVSIEMKSGEIYRGYLEETEDNMNCVLKEAMRTDINGNTTHVELVYVRGSQILFIVFPDMLKHAPMFKRVKLWKKHKGVIPSLGQGGPGGAGPRGQAAAIIRKA 126
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Match: D0NPB0_PHYIT (Small nuclear ribonucleoprotein Sm D3 n=2 Tax=Peronosporaceae TaxID=4777 RepID=D0NPB0_PHYIT) HSP 1 Score: 142 bits (357), Expect = 1.430e-39 Identity = 72/136 (52.94%), Postives = 94/136 (69.12%), Query Frame = 0
Query: 1 MSVTGKSGVGMPIILMHDAEGAICTIETKGGEVYRGILDESEDNMNITMKDVVVTNPRGKEARLRRVYIRGSQILFVIVPDL----------LSKAPMFKRIALWRKYKGNPPSFAATG-----PRGAAAAIIRRA 121
M+VTGK GVG+P IL+HD EG I +IE K GE YRG+LDE+EDNMN MKD V T+ G +++ +VY+RGSQILF++ PD+ L APMFKR+ +W+K+KG+ P+ G PRG AAAIIR+A
Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVSIEMKTGETYRGLLDETEDNMNCVMKDAVRTDINGNTSQVEQVYLRGSQILFIVFPDIYPLQPDIAVTLKHAPMFKRVKMWKKHKGSIPTLGQGGVGGGAPRGQAAAIIRKA 136
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Match: A0A7R9YBR3_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBR3_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.720e-39 Identity = 71/133 (53.38%), Postives = 97/133 (72.93%), Query Frame = 0
Query: 1 MSVTGKSGVGMPIILMHDAEGAICTIETKGGEVYRGILDESEDNMNITMKDVVVTNPRGKEARLRRVYIRGSQILFVIVPDLLSKAPMFKRIALWRKYKGNPPSFAATGPRGAAAAIIRRA-GPQPGRGVPAG 132
MSVTGK G+G+P IL++DAEG I T+ETK G++YRG L ++ED MN+TM++V + G+EA VYIRG+Q+ ++VPD+L KAP F+R+ W++YKGNPPS RG AAAIIR+ + G GVP+G
Sbjct: 1 MSVTGKRGIGIPAILLYDAEGTIVTVETKLGDLYRGELTDTEDTMNLTMRNVQKKSAGGQEAHAEVVYIRGNQVAMIMVPDMLCKAPAFQRVTRWKEYKGNPPSLGTQEARGQAAAIIRKTQAKRRGMGVPSG 133
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Match: K3X3X6_GLOUD (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3X6_GLOUD) HSP 1 Score: 140 bits (354), Expect = 3.800e-39 Identity = 72/131 (54.96%), Postives = 89/131 (67.94%), Query Frame = 0
Query: 1 MSVTGKSGVGMPIILMHDAEGAICTIETKGGEVYRGILDESEDNMNITMKDVVVTNPRGKEARLRRVYIRGSQILFVIVPDLL-----SKAPMFKRIALWRKYKGNPPSFA-----ATGPRGAAAAIIRRA 121
M+VTGK GVG+P IL+HD EG I +IE K GE YRG LDE+EDNMN +KD V T G + +VYIRG QILF+I PD+ + APMFKR+ LW+K+KG+ P+ GPRG AAAIIR+A
Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVSIELKSGETYRGFLDETEDNMNCVLKDAVRTELNGSTTHVEQVYIRGGQILFIIFPDIYPSLLPTHAPMFKRVKLWKKHKGSIPALGQGGPGGGGPRGQAAAIIRKA 131 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8647.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig8647.1.1 ID=prot_P-wetherbeei_contig8647.1.1|Name=mRNA_P-wetherbeei_contig8647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bpback to top |