prot_P-wetherbeei_contig8633.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8633.2.1
Unique Nameprot_P-wetherbeei_contig8633.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length166
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Match: A0A521YL69_9PROT (MarR family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YL69_9PROT)

HSP 1 Score: 206 bits (523), Expect = 2.350e-65
Identity = 108/162 (66.67%), Postives = 128/162 (79.01%), Query Frame = 0 
Query:    4 PKPERDAARDEPRLPLWSRPGYLVRRLHQINYALWLEELGHANMTPVQYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPADRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRLIEANNEVGRATLRSD 165
            P+P R     EPRLPLWSRPGYL+RRLHQI+ AL+LEE   A +TPVQYG+LTAL+ RGE DQ +LA+E+G+DRT  AEVLSRLE R LV RK NP DRRARLA +T +GR++  ++F  MQR+QDR+ APLTQKERD+FM TL RLIEANNE GR  LR D
Sbjct:    3 PRPRR-----EPRLPLWSRPGYLIRRLHQIHCALFLEECRDAGLTPVQYGLLTALAFRGELDQGSLAEELGLDRTTAAEVLSRLERRGLVTRKPNPRDRRARLARITRRGRSVTAAMFSGMQRAQDRMCAPLTQKERDVFMATLARLIEANNEYGRGALRID 159
[Close]
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Match: A0A1Y6C872_9HYPH (Transcriptional regulator, MarR family n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6C872_9HYPH)

HSP 1 Score: 164 bits (415), Expect = 9.710e-49
Identity = 84/148 (56.76%), Postives = 109/148 (73.65%), Query Frame = 0 
Query:   16 RLPLWSRPGYLVRRLHQINYALWLEELGHANMTPVQYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPADRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRLIEANNEVGRATLR 163
            R+PLW+RPGYLVRRLHQI+YAL+ EE G   +TPVQYG+LT L ++ + DQ +L  E+GIDRTNVA+VL+RL  R LV RK +  DRR  LA LT +G  + + +  AMQR+QDRLL PL  +ER+ F+T L+RLI+ NN +GR   R
Sbjct:   25 RMPLWARPGYLVRRLHQIHYALFFEECGAFEITPVQYGVLTTLLLQADIDQNSLGRELGIDRTNVADVLNRLSKRGLVERKRSSEDRRMVLARLTPEGERITSEMHAAMQRAQDRLLQPLLPEERNAFLTMLIRLIDGNNHLGRTIFR 172
[Close]
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Match: A0A7W3Q4H0_9HYPH (DNA-binding MarR family transcriptional regulator n=5 Tax=Aminobacter TaxID=31988 RepID=A0A7W3Q4H0_9HYPH)

HSP 1 Score: 163 bits (413), Expect = 2.580e-48
Identity = 86/147 (58.50%), Postives = 107/147 (72.79%), Query Frame = 0 
Query:   16 RLPLWSRPGYLVRRLHQINYALWLEELGHANMTPVQYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPADRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRLIEANNEVGRATL 162
            RLPLW RPGYL+RRLHQ++YAL+ EE     +TPVQYG+LT LS   + DQ +LA  +GIDRTNVA+VLSRL  R LV R  +  D+R  LA LT +G  L+ ++ PAM R+QDRLL  L  KERD F+ TL+RL+EANN+ GRA L
Sbjct:   30 RLPLWKRPGYLIRRLHQVHYALFFEECEGFGITPVQYGLLTILSGNPDSDQISLAQALGIDRTNVADVLSRLAQRGLVERTRSTEDKRMVLARLTGEGEKLVAAMHPAMSRAQDRLLDTLGDKERDAFLATLIRLLEANNKYGRAAL 176
[Close]
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Match: A0A142LYW5_AMIAI (DNA-binding MarR family transcriptional regulator n=3 Tax=Aminobacter TaxID=31988 RepID=A0A142LYW5_AMIAI)

HSP 1 Score: 163 bits (413), Expect = 2.740e-48
Identity = 86/147 (58.50%), Postives = 107/147 (72.79%), Query Frame = 0 
Query:   16 RLPLWSRPGYLVRRLHQINYALWLEELGHANMTPVQYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPADRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRLIEANNEVGRATL 162
            RLPLW RPGYL+RRLHQ++YAL+ EE     +TPVQYG+LT LS   + DQ +LA  +GIDRTNVA+VLSRL  R LV R  +  D+R  LA LT +G  L+ ++ PAM R+QDRLL  L  KERD F+ TL+RL+EANN+ GRA L
Sbjct:   32 RLPLWKRPGYLIRRLHQVHYALFFEECEGFGITPVQYGLLTILSGNPDSDQISLAQALGIDRTNVADVLSRLAQRGLVERTRSTEDKRMVLARLTGEGEKLVAAMHPAMSRAQDRLLDTLGDKERDAFLATLIRLLEANNKYGRAAL 178
[Close]
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Match: UPI001FEE2593 (MarR family winged helix-turn-helix transcriptional regulator n=1 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI001FEE2593)

HSP 1 Score: 162 bits (411), Expect = 3.070e-48
Identity = 83/147 (56.46%), Postives = 108/147 (73.47%), Query Frame = 0 
Query:   17 LPLWSRPGYLVRRLHQINYALWLEELGHANMTPVQYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPADRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRLIEANNEVGRATLR 163
            +PLW+RPG+LVRRLHQINYAL+ EE    ++TPVQY +LT LS+  + DQ +L  EVGIDRTNVA+VL RLE R L+ RK+   DRRA LA LT +G  +   +F AMQR+Q+RLL PL  +ER  FM TL+RL++A+N +GR   +
Sbjct:   18 MPLWARPGFLVRRLHQINYALFFEECASFDITPVQYALLTTLSLNPDMDQVSLGKEVGIDRTNVADVLRRLERRGLLERKKGDKDRRAVLAHLTTEGERVTRDMFAAMQRAQNRLLEPLPAEERTAFMATLLRLVDAHNHLGRTVFQ 164
[Close]
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Match: UPI0003642D11 (MarR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 TaxID=1116369 RepID=UPI0003642D11)

HSP 1 Score: 163 bits (412), Expect = 3.880e-48
Identity = 84/147 (57.14%), Postives = 109/147 (74.15%), Query Frame = 0 
Query:   16 RLPLWSRPGYLVRRLHQINYALWLEELGHANMTPVQYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPADRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRLIEANNEVGRATL 162
            RLPLW RPGYL+RRLHQ++YAL+ EE     +TPVQYG+LT LS   + DQ +LA  +GIDRTNVA+VLSRL  R L+ R  +  D+R  LA LTA+G  L+ ++ PAM R+QDRLL  L  KER+ F++TL++L+EANN+ GRA L
Sbjct:   32 RLPLWKRPGYLIRRLHQVHYALFFEECEGFGITPVQYGLLTILSGNPDSDQISLAQALGIDRTNVADVLSRLAQRGLIERTRSTEDKRMVLARLTAEGEKLVAAMHPAMSRAQDRLLDTLADKEREAFLSTLIKLLEANNKYGRAAL 178
[Close]
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Match: UPI00200A408F (MarR family transcriptional regulator n=1 Tax=Roseomonas sp. NAR14 TaxID=2937791 RepID=UPI00200A408F)

HSP 1 Score: 162 bits (410), Expect = 9.080e-48
Identity = 87/147 (59.18%), Postives = 110/147 (74.83%), Query Frame = 0 
Query:   16 RLPLWSRPGYLVRRLHQINYALWLEELGHANMTPVQYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPADRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRLIEANNEVGRATL 162
            R+PLW RPGYLVRRLHQ++ AL+  E    ++TPVQYG+LT LS+    DQ TLA EVG+DRTNVA+VL RLE R LVRR+   ADRR  LA LTA G AL+ +++  M+RSQ+RLLAPL   ER+ F+  L+RLI+A+N+ GRA L
Sbjct:   39 RMPLWRRPGYLVRRLHQLHNALFFSECEGFDITPVQYGVLTTLSLLPGSDQNTLAQEVGLDRTNVADVLVRLERRGLVRRQRGEADRRTVLAWLTADGEALLKAMYAVMRRSQERLLAPLAPAEREQFLGMLLRLIDAHNQHGRAAL 185
[Close]
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Match: A0A7W9L2R5_9HYPH (DNA-binding MarR family transcriptional regulator n=1 Tax=Prosthecomicrobium pneumaticum TaxID=81895 RepID=A0A7W9L2R5_9HYPH)

HSP 1 Score: 161 bits (408), Expect = 1.620e-47
Identity = 85/147 (57.82%), Postives = 109/147 (74.15%), Query Frame = 0 
Query:   16 RLPLWSRPGYLVRRLHQINYALWLEELGHANMTPVQYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPADRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRLIEANNEVGRATL 162
            +LPLW RPGYLVRRLHQ++YAL+ EE     +TPVQYG+LT LS + + DQ TLA+ +GIDRTNVA+VL+RLE R LV R  + +DRR  LA LT +G  L+ S+ PAM R+Q+RLL  L   ER+ F+ TL+RL++ANN  GRA L
Sbjct:   33 KLPLWKRPGYLVRRLHQVHYALFFEECAGFGITPVQYGLLTILSTQPDTDQITLANALGIDRTNVADVLARLEQRGLVARTRSRSDRRMVLARLTPEGERLVESMHPAMARAQERLLETLAPDERERFLETLMRLVDANNRFGRAAL 179
[Close]
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Match: A0A2K8YQI8_9BRAD (MarR family transcriptional regulator n=6 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A2K8YQI8_9BRAD)

HSP 1 Score: 160 bits (404), Expect = 2.080e-47
Identity = 82/147 (55.78%), Postives = 108/147 (73.47%), Query Frame = 0 
Query:   17 LPLWSRPGYLVRRLHQINYALWLEELGHANMTPVQYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPADRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRLIEANNEVGRATLR 163
            +PLW+RPG+L+RRLHQINYA++ EE    ++TPVQY +LT LS+  + DQ TL  E+GIDRTNVA+VL RLE R LV+R++   D RA +A LT  G  +   +F AMQR+Q RLLAPL  +ER  FM TL++L+EANN +GR T +
Sbjct:    1 MPLWARPGFLIRRLHQINYAIFFEECDAYDITPVQYALLTTLSMNPDTDQVTLGREIGIDRTNVADVLRRLEQRGLVKRRKADHDGRATIARLTPAGDKVARDMFSAMQRAQTRLLAPLPIEERKAFMATLLKLVEANNHLGRTTFQ 147
[Close]
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Match: UPI001C0C6D86 (MarR family transcriptional regulator n=1 Tax=Achromobacter sp. GG226 TaxID=2779529 RepID=UPI001C0C6D86)

HSP 1 Score: 160 bits (406), Expect = 2.120e-47
Identity = 85/158 (53.80%), Postives = 112/158 (70.89%), Query Frame = 0 
Query:    6 PERDAARDEPRLPLWSRPGYLVRRLHQINYALWLEELGHANMTPVQYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPADRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRLIEANNEVGRATLR 163
            P     R   R PL  RPG+L+RRLHQI+ AL+ EE G + +TPVQY +LTAL+ RGE DQ ++A E+G++RT VAEVL+RLE R+LV R+ +P DRR RL  LT  G+AL+  + PA+QR+ DR L PL+ +ERD+ M  LVRL+EANN+ G    R
Sbjct:   14 PAEQLERARERSPLLGRPGFLIRRLHQIHGALFQEETGASGITPVQYSLLTALNRRGELDQISIAREIGLERTTVAEVLTRLETRELVTRRPHPEDRRVRLVKLTRAGKALVRRMAPAVQRAHDRTLDPLSAQERDVLMLQLVRLVEANNDAGAVQFR 171
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8633.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521YL69_9PROT2.350e-6566.67MarR family transcriptional regulator n=1 Tax=Beta... [more]
A0A1Y6C872_9HYPH9.710e-4956.76Transcriptional regulator, MarR family n=1 Tax=Tis... [more]
A0A7W3Q4H0_9HYPH2.580e-4858.50DNA-binding MarR family transcriptional regulator ... [more]
A0A142LYW5_AMIAI2.740e-4858.50DNA-binding MarR family transcriptional regulator ... [more]
UPI001FEE25933.070e-4856.46MarR family winged helix-turn-helix transcriptiona... [more]
UPI0003642D113.880e-4857.14MarR family transcriptional regulator n=1 Tax=Hoef... [more]
UPI00200A408F9.080e-4859.18MarR family transcriptional regulator n=1 Tax=Rose... [more]
A0A7W9L2R5_9HYPH1.620e-4757.82DNA-binding MarR family transcriptional regulator ... [more]
A0A2K8YQI8_9BRAD2.080e-4755.78MarR family transcriptional regulator n=6 Tax=Brad... [more]
UPI001C0C6D862.120e-4753.80MarR family transcriptional regulator n=1 Tax=Achr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000835MarR-type HTH domainPRINTSPR00598HTHMARRcoord: 100..116
score: 41.67
coord: 81..96
score: 27.6
coord: 130..150
score: 24.6
coord: 64..80
score: 22.55
IPR000835MarR-type HTH domainSMARTSM00347marrlong4coord: 40..140
e-value: 1.6E-19
score: 80.9
IPR000835MarR-type HTH domainPFAMPF12802MarR_2coord: 46..104
e-value: 2.9E-12
score: 46.5
IPR000835MarR-type HTH domainPROSITEPS50995HTH_MARR_2coord: 23..152
score: 28.496943
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 16..160
e-value: 7.2E-36
score: 125.2
NoneNo IPR availablePANTHERPTHR33164:SF57TRANSCRIPTIONAL REGULATOR-RELATEDcoord: 26..156
NoneNo IPR availablePANTHERPTHR33164TRANSCRIPTIONAL REGULATOR, MARR FAMILYcoord: 26..156
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 18..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8633contigP-wetherbeei_contig8633:866..1363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8633.2.1mRNA_P-wetherbeei_contig8633.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8633 866..1363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8633.2.1 ID=prot_P-wetherbeei_contig8633.2.1|Name=mRNA_P-wetherbeei_contig8633.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
MARPKPERDAARDEPRLPLWSRPGYLVRRLHQINYALWLEELGHANMTPV
QYGILTALSIRGEQDQTTLADEVGIDRTNVAEVLSRLEARKLVRRKENPA
DRRARLASLTAKGRALMTSLFPAMQRSQDRLLAPLTQKERDLFMTTLVRL
IEANNEVGRATLRSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000835HTH_MarR-typ
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf