prot_P-wetherbeei_contig8511.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8511.2.1 vs. uniprot
Match: A0A835YUZ4_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ4_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.450e-13 Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0
Query: 42 IAGTAADLSDVLAAAREMLDGAAGAEKHPIVPAEIVAYAQRISGTTAAPPDWEPGMPMVNFRPPAPTEETMRSGALS 118
IAG +ADL L +AR+ L A + ++IVAYAQRISGTT+AP W+PGMPMV F PPAP E MR GAL+
Sbjct: 63 IAGASADLRHALESARKSLGEFDKACAAGVAVSDIVAYAQRISGTTSAPAYWKPGMPMVGFLPPAPLPEMMRMGALT 139
BLAST of mRNA_P-wetherbeei_contig8511.2.1 vs. uniprot
Match: A0A7S3UVI8_HETAK (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVI8_HETAK) HSP 1 Score: 72.8 bits (177), Expect = 1.400e-12 Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 0
Query: 34 RLRAYARTIAGTAADLSDVLAAAREMLDGAAGAEKHPIVPAEIVAYAQRISGTTAAPPDWEPGMPMVNFRPPAPTEETMRSGALSLASNAAGRAELE 130
R R A ++ DL L + ++D A A +P+ +VAYAQRI GTTAAPP W+PGMPMV F PPAP E +R+G+ +N + +L+
Sbjct: 76 RARDLASALSSKEKDLRIALRKVKPVVDAARLANANPVSLKGLVAYAQRIGGTTAAPPYWKPGMPMVGFIPPAPLPEQIRAGSFHAYANGLKKVDLK 172
BLAST of mRNA_P-wetherbeei_contig8511.2.1 vs. uniprot
Match: H3H5Y2_PHYRM (PPM-type phosphatase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5Y2_PHYRM) HSP 1 Score: 72.8 bits (177), Expect = 4.670e-12 Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0
Query: 38 YARTIAGTAADLSDVLAAAREMLDGAAGAEKHPIVPAEIVAYAQRISGTTAAPPDWEPGMPMVNFRPPAPTEETMRSGALS 118
YA + + D+++VL R +L A K + P +IVAYA RI+GTT+AP +W+PG+PM F PPAP E MR+G LS
Sbjct: 96 YAAQLRRSQEDIANVLRKHRVVLQNAKHQSKVVLDPRDIVAYAHRIAGTTSAPKEWQPGLPMFGFMPPAPQEHMMRAGVLS 176
BLAST of mRNA_P-wetherbeei_contig8511.2.1 vs. uniprot
Match: A0A2D4CI38_PYTIN (Mediator of RNA polymerase II transcription subunit 4 (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CI38_PYTIN) HSP 1 Score: 72.4 bits (176), Expect = 4.850e-12 Identity = 44/96 (45.83%), Postives = 58/96 (60.42%), Query Frame = 0
Query: 24 AIEEPKDGGTRLRAYARTIAGTAADLSDVLAAAREMLDGAAGAEKHP-IVPAEIVAYAQRISGTTAAPPDWEPGMPMVNFRPPAPTEETMRSGALS 118
AI+E + R+ YA + + D+S VL R +LD AA + P + P ++VAYA RI+GTTAA +W PG PM F PPAP E MR+G LS
Sbjct: 97 AIDEKRQ---RVIRYAAQLRRSQEDISSVLRKHRRVLDQAAQQPQQPRLDPRDVVAYAHRIAGTTAADKNWRPGFPMFGFMPPAPQEHMMRAGVLS 189
BLAST of mRNA_P-wetherbeei_contig8511.2.1 vs. uniprot
Match: A0A1Y2H202_9FUNG (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H202_9FUNG) HSP 1 Score: 52.0 bits (123), Expect = 6.540e-5 Identity = 33/75 (44.00%), Postives = 43/75 (57.33%), Query Frame = 0
Query: 48 DLSDVLAAAREMLDG----AAGAEKHPIVPAEIVAYAQRISGTTAAPPDWEPGMPMVNFRPPAPTEETMRSGALS 118
D +VL A+ E LD AA A + EIVAYA R+S T+APP++ P P F PP P E +MR+G L+
Sbjct: 114 DAKEVLEASMEDLDEKRAVAAAARSSEVSVGEIVAYANRLSNYTSAPPNFNPSDPNHPFEPPYPREVSMRAGILN 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8511.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig8511.2.1 ID=prot_P-wetherbeei_contig8511.2.1|Name=mRNA_P-wetherbeei_contig8511.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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