prot_P-wetherbeei_contig8428.2.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8428.2.2
Unique Nameprot_P-wetherbeei_contig8428.2.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length57
Homology
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BLAST of mRNA_P-wetherbeei_contig8428.2.2 vs. uniprot
Match: A0A7S2XXP6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXP6_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 8.620e-8
Identity = 31/62 (50.00%), Postives = 36/62 (58.06%), Query Frame = 0 
Query:    4 PRVTG--WPLDMVPGSSGGNQ-------FQLYDRRVNLDAFGKDAPLYSLLRAWIQDDPSRP 56
            PR T   W   +   SS  N        + + DRRVNL AF +D  LYSLLRAW+QDDPSRP
Sbjct:   57 PRATSHSWGESLSSPSSPSNALYQSDPLYIIMDRRVNLSAFPEDMSLYSLLRAWVQDDPSRP 118
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BLAST of mRNA_P-wetherbeei_contig8428.2.2 vs. uniprot
Match: A0A4D9D8X2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8X2_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 9.910e-6
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 0 
Query:   24 QLYDRRVNLDAFGKDAPLYSLLRAWIQDDPSRPV 57
            ++  RRVN DA   DA LYS+LRAW+QDDP+R V
Sbjct:   91 EILGRRVNFDALSADASLYSMLRAWVQDDPTRQV 124
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BLAST of mRNA_P-wetherbeei_contig8428.2.2 vs. uniprot
Match: K8YP16_NANGC (Uroporphyrinogen 3 C-methyltransferase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YP16_NANGC)

HSP 1 Score: 50.4 bits (119), Expect = 1.010e-5
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 0 
Query:   24 QLYDRRVNLDAFGKDAPLYSLLRAWIQDDPSRPV 57
            ++  RRVN DA   DA LYS+LRAW+QDDP+R V
Sbjct:  551 EILGRRVNFDALSADASLYSMLRAWVQDDPTRQV 584
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8428.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S2XXP6_9STRA8.620e-850.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D8X2_9STRA9.910e-661.76Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8YP16_NANGC1.010e-561.76Uroporphyrinogen 3 C-methyltransferase n=1 Tax=Nan... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028226Protein LIN37PFAMPF15306LIN37coord: 23..55
e-value: 8.6E-9
score: 35.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8428contigP-wetherbeei_contig8428:1849..2349 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8428.2.2mRNA_P-wetherbeei_contig8428.2.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8428 1848..2349 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8428.2.2 ID=prot_P-wetherbeei_contig8428.2.2|Name=mRNA_P-wetherbeei_contig8428.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=57bp
VQQPRVTGWPLDMVPGSSGGNQFQLYDRRVNLDAFGKDAPLYSLLRAWIQ
DDPSRPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028226LIN37