prot_P-wetherbeei_contig8407.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8407.2.1
Unique Nameprot_P-wetherbeei_contig8407.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length162
Homology
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A672HUD6_SALFA (Reverse transcriptase domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HUD6_SALFA)

HSP 1 Score: 107 bits (267), Expect = 4.310e-25
Identity = 55/134 (41.04%), Postives = 82/134 (61.19%), Query Frame = 0
Query:    5 PRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQINGRAAAP 138
            P++G+   + N+RP++LL VDYK+L+K  +  L   +   I  DQT  VPGR +  N+ L+RD+   L   +S D  A ++ +D EKA+D VEH FLWR +E+ G    F+  +Q+LYR   + L+ING   AP
Sbjct:   64 PKKGNLQDIKNWRPVSLLCVDYKLLSKVLASRLGRAMEQVIHRDQTYCVPGRSMVDNVHLIRDV---LEVSSSLDIDAGLISVDQEKAFDRVEHSFLWRVMESFGFSAGFIAKIQVLYRDIESVLKINGSLCAP 194          
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A060SPQ7_PYCCI (RNase H type-1 domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPQ7_PYCCI)

HSP 1 Score: 110 bits (274), Expect = 6.240e-25
Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 0
Query:    4 WPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 133
            W  +G+   + NYRPI +LN DYK+L K  +  LAL  P+ + P Q GFVPGR +     L R +   L A+A K+   AI+ LD EKAYD + H++LWR LE  G+P SFV  ++ LY  A  ++ +NG
Sbjct:  282 WKEKGEKTKVVNYRPITVLNTDYKLLTKIMAVKLALAAPSIVHPSQAGFVPGRRLRDQTQLARMM--MLWAEA-KEENGAIVALDQEKAYDKISHDYLWRVLERFGIPASFVNIIKSLYASAETSIMVNG 408          
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A060SP60_PYCCI (RNase H type-1 domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SP60_PYCCI)

HSP 1 Score: 110 bits (274), Expect = 6.260e-25
Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 0
Query:    4 WPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 133
            W  +G+   + NYRPI +LN DYK+L K  +  LAL  P+ + P Q GFVPGR +     L R +   L A+A K+   AI+ LD EKAYD + H++LWR LE  G+P SFV  ++ LY  A  ++ +NG
Sbjct:  132 WKEKGEKTKVVNYRPITVLNTDYKLLTKIMAVQLALAAPSIVHPSQAGFVPGRRLRDQTQLARMM--MLWAEA-KEENGAIVALDQEKAYDKISHDYLWRVLERFGIPASFVNIIKSLYASAETSIMVNG 258          
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A665WRW9_ECHNA (Reverse transcriptase domain-containing protein n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665WRW9_ECHNA)

HSP 1 Score: 104 bits (260), Expect = 1.420e-24
Identity = 56/134 (41.79%), Postives = 83/134 (61.94%), Query Frame = 0
Query:    5 PRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQINGRAAAP 138
            P++GD   L N+RP++LL  DYK+LAKA ++ L   +   +  DQ+  VPGR I+ N+ L+R +   L    S D    ++ +D EKA+D VEH++LW+ L A G    F+  +QLLYR  ++ L+ING  AAP
Sbjct:   71 PKKGDLQDLRNWRPVSLLCGDYKVLAKALARRLREVMAEVVHVDQSYCVPGRTISDNVTLIRHV---LELSGSLDMDTGLISIDQEKAFDRVEHQYLWQTLCAFGFSPGFIAGIQLLYRDVASILKINGGLAAP 201          
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A060SHR8_PYCCI (Reverse transcriptase domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SHR8_PYCCI)

HSP 1 Score: 107 bits (267), Expect = 5.330e-24
Identity = 56/130 (43.08%), Postives = 77/130 (59.23%), Query Frame = 0
Query:    4 WPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 133
            W  +G+   + NYRPI +LN DYK+L K  +  LA   P  + P Q GFVPGR +     L R +   L A+A K+   AI+ LD EKAYD + H++LWR LE  G+P+ FV  V+ LY  A  ++ +NG
Sbjct:  314 WKEKGEKTKVVNYRPITVLNTDYKLLTKIMAVKLAAAAPNIVHPAQAGFVPGRKLRDQTQLARMM--MLWAEA-KEVNGAIVALDQEKAYDKIAHDYLWRVLERFGIPELFVTTVKCLYANAETSVMVNG 440          
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A060SQU0_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SQU0_PYCCI)

HSP 1 Score: 107 bits (267), Expect = 5.600e-24
Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    4 WPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 133
            W  +G+   + NYRPI +LN DYK+L K  +  LA   P+ + P Q GFVPGR +     L R +   L A+A K+   AI+ LD EKAYD + H++LWR LE  G+P+ F+  V+ LY  A  ++ +NG
Sbjct:  510 WKEKGEKTKVVNYRPITVLNTDYKLLTKIMAVKLAAAAPSIVHPAQAGFVPGRKLRDQTQLARMM--MLWAEA-KEVNGAIVALDQEKAYDKIAHDYLWRVLERFGIPEPFITMVKSLYANAETSVMVNG 636          
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A672HKG1_SALFA (Reverse transcriptase domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HKG1_SALFA)

HSP 1 Score: 107 bits (266), Expect = 7.450e-24
Identity = 56/134 (41.79%), Postives = 81/134 (60.45%), Query Frame = 0
Query:    5 PRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQINGRAAAP 138
            P++G+   + N+RP++LL VDYK+L+K  +  L   +   I  DQT  VPGR +  NI L+RD+   L   +S D  A  + +D EKA+D VEH FLWR +E+ G    F+  +Q+LYR   + L+ING   AP
Sbjct:  517 PKKGNLQDIKNWRPVSLLCVDYKLLSKVLASRLGRAMEQVIHRDQTNCVPGRSMVDNIHLIRDV---LEVSSSLDIDAGQISVDQEKAFDRVEHSFLWRVMESFGFSAGFIAKIQVLYRDIESVLKINGSLCAP 647          
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: E2LBP9_MONPE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LBP9_MONPE)

HSP 1 Score: 101 bits (251), Expect = 1.140e-23
Identity = 54/128 (42.19%), Postives = 75/128 (58.59%), Query Frame = 0
Query:    6 RRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 133
            ++G+   +ANYRPI+LLN DYKI  KA +  L+  +   + PDQ GF+PGR+I  +I L + +       A       I+ LD EKAYD +EHE+LWR L    LP+ F+  V+ LY  A   + ING
Sbjct:   76 KKGERAEIANYRPISLLNTDYKIFTKALTIKLSKVVTELVHPDQAGFIPGRNIYDHIWLSKRVIEIAEEDAQN---GVIIALDQEKAYDRIEHEYLWRTLRTFNLPERFINTVKSLYEDAHTYVMING 200          
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A1M2W4G6_TRAPU (Transposon TX1 uncharacterized 149 kDa protein n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2W4G6_TRAPU)

HSP 1 Score: 105 bits (263), Expect = 1.940e-23
Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = 0
Query:    1 SSCWPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 133
            S  +  +GD   + NYRPI LLN DYK+L+K  +  LA   P  + P Q GFVPGR +  +  L R + A   A   K+   AI+ LD EKAYD + H++LWR LE  G+PK F   ++ LY  A  ++ ING
Sbjct:  665 SPIYKEKGDRARVVNYRPITLLNTDYKLLSKVLALRLAAVAPDIVHPAQAGFVPGRRLRNHTQLARMMIAWAEA---KEVNGAIVALDQEKAYDKISHDYLWRVLECFGVPKEFTEIIKSLYANAVTSVVING 794          
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A8D2LM88_VARKO (Reverse transcriptase domain-containing protein n=1 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2LM88_VARKO)

HSP 1 Score: 105 bits (262), Expect = 2.480e-23
Identity = 59/128 (46.09%), Postives = 77/128 (60.16%), Query Frame = 0
Query:    6 RRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 133
            ++GD   + N+RPIAL NVDY+ILAK  +  LA   P  + P QT  VPGR +  ++ L R+L         K +   I+ LD  KA+D V HEFLW  LE +GLP  FV  V+LLY+ AS T Q+NG
Sbjct:  293 KQGDLTLVKNWRPIALTNVDYRILAKILNGRLARLAPKIVVPGQTSAVPGRSMLDSLCLFREL---FELAREKKWKGKIMQLDQTKAFDCVHHEFLWATLEWKGLPHRFVQYVKLLYKEASVTPQVNG 417          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A672HUD6_SALFA4.310e-2541.04Reverse transcriptase domain-containing protein n=... [more]
A0A060SPQ7_PYCCI6.240e-2543.85RNase H type-1 domain-containing protein n=1 Tax=P... [more]
A0A060SP60_PYCCI6.260e-2543.85RNase H type-1 domain-containing protein n=1 Tax=P... [more]
A0A665WRW9_ECHNA1.420e-2441.79Reverse transcriptase domain-containing protein n=... [more]
A0A060SHR8_PYCCI5.330e-2443.08Reverse transcriptase domain-containing protein n=... [more]
A0A060SQU0_PYCCI5.600e-2442.31Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A672HKG1_SALFA7.450e-2441.79Reverse transcriptase domain-containing protein n=... [more]
E2LBP9_MONPE1.140e-2342.19Reverse transcriptase domain-containing protein (F... [more]
A0A1M2W4G6_TRAPU1.940e-2342.86Transposon TX1 uncharacterized 149 kDa protein n=1... [more]
A0A8D2LM88_VARKO2.480e-2346.09Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 14..137
e-value: 4.4E-21
score: 75.4
NoneNo IPR availablePANTHERPTHR19446:SF433SUBFAMILY NOT NAMEDcoord: 8..136
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 8..136
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 5..111
e-value: 1.12411E-30
score: 108.533
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 15..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8407contigP-wetherbeei_contig8407:1714..2199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8407.2.1mRNA_P-wetherbeei_contig8407.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8407 874..2199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8407.2.1 ID=prot_P-wetherbeei_contig8407.2.1|Name=mRNA_P-wetherbeei_contig8407.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp
SSCWPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQT
GFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEF
LWRALEARGLPKSFVLDVQLLYRGASATLQINGRAAAPASTSGAGAAAGL
PALAAAFRSRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043502DNA/RNA_pol_sf