prot_P-wetherbeei_contig8365.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8365.2.1
Unique Nameprot_P-wetherbeei_contig8365.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length82
Homology
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Match: A0A7S3XRL5_HETAK (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK)

HSP 1 Score: 109 bits (273), Expect = 1.060e-26
Identity = 51/78 (65.38%), Postives = 64/78 (82.05%), Query Frame = 0
Query:    4 MAKHNIDTPDSKPATTPEEAEKLFKEMVGDDPNKDVVIKAQVLSGGRGLGTFKNGFRGGVHMCNRPEDAKLFASKMLG 81
            MAK+ + TP ++ ATTP+EAE ++++M   DPNKDVVIKAQVL+GGRGLGTF +GF+GGVHMC RP  AK +A KMLG
Sbjct:    1 MAKYGVKTPPAQVATTPDEAESIYQKMTAGDPNKDVVIKAQVLAGGRGLGTFTSGFKGGVHMCTRPGQAKDYAEKMLG 78          
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Match: A0A024GFW4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Albugo TaxID=65356 RepID=A0A024GFW4_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.950e-26
Identity = 50/79 (63.29%), Postives = 63/79 (79.75%), Query Frame = 0
Query:    4 MAKHNIDTPDSKPATTPEEAEKLFKEMVGDDPNKDVVIKAQVLSGGRGLGTFKNGFRGGVHMCNRPEDAKLFASKMLGQ 82
            M ++ I  P+  PA TP+EA+K + ++VG+  N DVVIKAQ L+GGRGLG FKNGF+GGVHMC +PEDAK FASKM+GQ
Sbjct:    1 MKEYGIQIPEGVPAMTPDEADKAYMKIVGNKSNADVVIKAQALTGGRGLGHFKNGFKGGVHMCTKPEDAKTFASKMIGQ 79          
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Match: D7G0B9_ECTSI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 4.810e-25
Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    1 MELMAKHNIDTPDSKPATTPEEAEKLFKEMVGDDPNKDVVIKAQVLSGGRGLGTFKNGFRGGVHMCNRPEDAKLFASKMLGQ 82
            M++MA+H+ID P SK A TPE+AEK   E++G +  KDVVIKAQVLSGGRG G F NGF  GVHMC +P DAK +AS+MLGQ
Sbjct:   54 MQIMAEHDIDIPASKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQ 135          
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Match: A0A067CEF9_SAPPC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEF9_SAPPC)

HSP 1 Score: 103 bits (257), Expect = 2.810e-24
Identity = 51/82 (62.20%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 MELMAKHNIDTPDSKPATTPEEAEKLFKEMVGDDPNKDVVIKAQVLSGGRGLGTFKNGFRGGVHMCNRPEDAKLFASKMLGQ 82
            ME+M    +  P S  ATTP EAE  +  + G D  KDVVIKAQ L+GGRGLG FKNGF+GGVHMC +PEDAK FA KMLG+
Sbjct:   32 MEIMKSFGVAIPASLHATTPAEAEAAYNTLKGGDATKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKPEDAKNFAEKMLGE 113          
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Match: A0A485KYE4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYE4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.960e-23
Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MELMAKHNIDTPDSKPATTPEEAEKLFKEMVGDDPNKDVVIKAQVLSGGRGLGTFKNGFRGGVHMCNRPEDAKLFASKMLGQ 82
            M++M  + +  P S+ A TPEEA  ++ ++ G D  KDVVIKAQ L+GGRGLG FKNGF+GGVHMC + EDAK FA KM+G+
Sbjct:   31 MQIMQSYGVAIPASQHANTPEEAVNVYNKLKGGDEGKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKAEDAKTFAQKMIGE 112          
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Match: H3GTW5_PHYRM (ATP-grasp domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTW5_PHYRM)

HSP 1 Score: 98.6 bits (244), Expect = 4.970e-23
Identity = 48/82 (58.54%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 MELMAKHNIDTPDSKPATTPEEAEKLFKEMVGDDPNKDVVIKAQVLSGGRGLGTFKNGFRGGVHMCNRPEDAKLFASKMLGQ 82
            +E+M    + TP   PA TP EA+  F ++ GD    DVVIKAQ L+GGRGLG+FKNGF+GGVHMC RPE A+ FA KMLG+
Sbjct:   33 LEIMKGFGVATPQGIPADTPAEAKAAFSKIRGDREGVDVVIKAQALTGGRGLGSFKNGFKGGVHMCTRPEQAEDFAKKMLGE 114          
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Match: A0A024T9H2_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9H2_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.610e-22
Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    1 MELMAKHNIDTPDSKPATTPEEAEKLFKEMVGDDPNKDVVIKAQVLSGGRGLGTFKNGFRGGVHMCNRPEDAKLFASKMLGQ 82
            M++M  + +  P S+ A TPE+A +++ ++ G +  KDVVIKAQ L+GGRGLG FKNGF+GGVHMC + EDAK FA KM+G+
Sbjct:   30 MKIMQSYGVAIPASEAADTPEQAVQVYNKLKGGNDTKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKAEDAKKFAQKMIGE 111          
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Match: A0A7S3HR10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HR10_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 7.440e-22
Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MELMAKHNIDTPDSKPATTPEEAEKLFKEMVGDDPNKDVVIKAQVLSGGRGLGTFKNGFRGGVHMCNRPEDAKLFASKMLGQ 82
            M++     I  P S  AT+ +EA+KL+K+++G+   KD VIKA VL+GGRGLG F NGF+GGVH+CN+P D + FAS+MLGQ
Sbjct:   39 MDIFRGFGIPVPKSGMATSVDEAKKLYKDVIGE--GKDCVIKAMVLTGGRGLGHFSNGFKGGVHLCNKPGDVEKFASQMLGQ 118          
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Match: B7FXA2_PHATC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXA2_PHATC)

HSP 1 Score: 96.3 bits (238), Expect = 1.370e-21
Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 0
Query:    1 MELMAKHNIDTPDSKPATTPEEAEKLFKEMVGDD--PNKDVVIKAQVLSGGRGLGTFKNGFRGGVHMCNRPEDAKLFASKMLG 81
            ME+M  H I TP+   A+ PEEAE +F   +     P KD+VIKAQVLSGGRGLGTFKNGF+GGVHM  +P  A+ FA+ MLG
Sbjct:   33 MEIMKNHGIQTPECYVASNPEEAENIFLNSLNRPGAPKKDIVIKAQVLSGGRGLGTFKNGFKGGVHMVTKPGQAREFAAAMLG 115          
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Match: A0A484DU65_BRELC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DU65_BRELC)

HSP 1 Score: 95.5 bits (236), Expect = 2.530e-21
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    1 MELMAKHNIDTPDSKPATTPEEAEKLFKEMVGDDPNKDVVIKAQVLSGGRGLGTFKNGFRGGVHMCNRPEDAKLFASKMLGQ 82
            +E+M +  + TP   PA TP EA+  F+++ GD    DVVIKAQ L+GGRGLGTF+NGF+GGVHMC RPE A+  A+KML +
Sbjct:   33 LEIMKRFGVATPLGIPADTPAEAKAAFEQIRGDREGVDVVIKAQALTGGRGLGTFQNGFKGGVHMCTRPEQAEEIANKMLNE 114          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8365.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XRL5_HETAK1.060e-2665.38Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A024GFW4_9STRA3.950e-2663.29Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
D7G0B9_ECTSI4.810e-2564.63Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A067CEF9_SAPPC2.810e-2462.20Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A485KYE4_9STRA1.960e-2357.32Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
H3GTW5_PHYRM4.970e-2358.54ATP-grasp domain-containing protein n=1 Tax=Phytop... [more]
A0A024T9H2_9STRA3.610e-2254.88Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S3HR10_9STRA7.440e-2254.88Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
B7FXA2_PHATC1.370e-2159.04Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A484DU65_BRELC2.530e-2156.10Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013650ATP-grasp fold, succinyl-CoA synthetase-typePFAMPF08442ATP-grasp_2coord: 2..82
e-value: 8.1E-16
score: 58.2
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 15..82
e-value: 3.0E-20
score: 73.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR11815:SF10SUCCINATE--COA LIGASE [ADP-FORMING] SUBUNIT BETA, MITOCHONDRIALcoord: 1..82
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 2..82
IPR005809Succinate--CoA synthetase, beta subunitPANTHERPTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINcoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8365contigP-wetherbeei_contig8365:1269..1853 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8365.2.1mRNA_P-wetherbeei_contig8365.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8365 1263..1853 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8365.2.1 ID=prot_P-wetherbeei_contig8365.2.1|Name=mRNA_P-wetherbeei_contig8365.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp
MELMAKHNIDTPDSKPATTPEEAEKLFKEMVGDDPNKDVVIKAQVLSGGR
GLGTFKNGFRGGVHMCNRPEDAKLFASKMLGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013650ATP-grasp_succ-CoA_synth-type
IPR013815ATP_grasp_subdomain_1
IPR005809Succ_CoA_synthase_bsu