prot_P-wetherbeei_contig835.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig835.4.1
Unique Nameprot_P-wetherbeei_contig835.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length364
Homology
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Match: D8SNW3_SELML (RING-type domain-containing protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SNW3_SELML)

HSP 1 Score: 70.5 bits (171), Expect = 7.530e-12
Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:  295 AEEECSVCLMGFEEGVNCFLLP-CGHIFHAECITLWLENHASCPVCKRDL 343
            A  EC+VCL+ FEE     LLP CGH+FHA+CI +WLE H++CP+C+R+L
Sbjct:   26 AGPECTVCLLQFEENEQVRLLPDCGHLFHADCIDMWLETHSTCPLCRRNL 75          
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Match: A0A7R9Z645_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z645_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.600e-10
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0
Query:  296 EEECSVCLMGFEEGVNCFLLPCGHIFHAECITLWLENHASCPVCKRDLEAAGKD 349
            +  CS+CL  +EEG     LPCGH++H EC++ W+ NH  CP+C  DLEA G +
Sbjct:  331 QPSCSICLGDYEEGERLIRLPCGHVYHEECVSAWVSNHVRCPLCNYDLEAGGHE 384          
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Match: A0A7S1VRK2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VRK2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.210e-10
Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0
Query:  299 CSVCLMGFEEGVNCFLLPCGHIFHAECITLWLENHASCPVCKRDLEAAGKDPASVLMITPVAT 361
            C++CL  +EEG     LPCGH++H EC+  W  NH  CP+C  DLE+   D AS    + V T
Sbjct:  150 CTICLGEYEEGEKLVKLPCGHVYHEECVDSWTTNHVRCPLCNFDLESVASDSASTAGTSTVTT 212          
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Match: A0A7S3C9F5_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C9F5_9CHLO)

HSP 1 Score: 70.1 bits (170), Expect = 3.320e-10
Identity = 25/49 (51.02%), Postives = 39/49 (79.59%), Query Frame = 0
Query:  296 EEECSVCLMGFEEGVNCFLLPCGHIFHAECITLWLENHASCPVCKRDLE 344
            +E+C++C + FEEG +  LLPC H+FHA+CI +WL ++  CPVCK+++E
Sbjct:  186 DEKCAICQVEFEEGEDALLLPCKHLFHADCIDIWLADNKCCPVCKQEIE 234          
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Match: A0A2C9UAV0_MANES (RING-type domain-containing protein n=2 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9UAV0_MANES)

HSP 1 Score: 66.6 bits (161), Expect = 3.740e-10
Identity = 23/51 (45.10%), Postives = 39/51 (76.47%), Query Frame = 0
Query:  293 MVAEEECSVCLMGFEEGVNCFLLPCGHIFHAECITLWLENHASCPVCKRDL 343
            +++++ CSVC+ GF+ GV    +PCGH++HA CI+ WL N+ SCP+C+ ++
Sbjct:   49 VISDDVCSVCMEGFQSGVGGKRVPCGHVYHAGCISSWLSNYNSCPLCRSNI 99          
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Match: A0A7S4IUE7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUE7_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.220e-10
Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 0
Query:  271 GDGGDGLASVVRRGST----AWARLRMVAEEE------CSVCLMGFEEGVNCFLLPCGHIFHAECITLWLENHASCPVCKRDLEA 345
            G+GG GL  +   GS     A A+  ++ +E       CS+CL  +EEG     LPCGH++H EC+T W+ NH  CP+C  DLEA
Sbjct:  351 GNGGGGL--IADGGSDDDSIAKAKAGLMMDESGSGQPACSICLGDYEEGERLVRLPCGHVYHEECVTAWVSNHVRCPLCNYDLEA 433          
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Match: A0A6A1VS05_9ROSI (E3 ubiquitin-protein ligase RING1-like n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VS05_9ROSI)

HSP 1 Score: 65.5 bits (158), Expect = 9.650e-10
Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 0
Query:  293 MVAEEECSVCLMGFEEGVNCFLLPCGHIFHAECITLWLENHASCPVCKRDL 343
            ++  + CSVC+  F  G     +PCGH++HA CI  WL +H+SCPVC+R++
Sbjct:   50 VITTDVCSVCIESFRSGEGGKQVPCGHVYHANCIASWLSSHSSCPVCRREI 100          
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Match: A0A448ZD87_9STRA (RING-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD87_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.390e-9
Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 0
Query:  289 ARLRMVAEEE--CSVCLMGFEEGVNCFLLPCGHIFHAECITLWLENHASCPVCKRDLEAAGKD 349
            A  + V +EE  CS+CL  +E+G N   LPCGH+FH +CIT W +++  CP+C  DLE+  +D
Sbjct:  284 AAAKTVDDEEPTCSICLCEYEKGDNLVSLPCGHVFHEDCITSWTDHNKRCPLCNADLESLRRD 346          
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Match: A0A7R9ZSU8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSU8_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.780e-9
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:  296 EEECSVCLMGFEEGVNCFLLPCGHIFHAECITLWLENHASCPVCKRDLEA 345
            E  CS+CL  +E+G N   LPC H++HA+CIT W +NH  CP+C  DL A
Sbjct:  172 EPHCSICLGEYEDGENLVSLPCKHVYHADCITSWTDNHTRCPLCNFDLAA 221          
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Match: I1R3C5_ORYGL (RING-type domain-containing protein n=2 Tax=Oryza TaxID=4527 RepID=I1R3C5_ORYGL)

HSP 1 Score: 64.7 bits (156), Expect = 1.910e-9
Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0
Query:  293 MVAEEECSVCLMGFEEGVNCFLLP-CGHIFHAECITLWLENHASCPVC 339
            M A  EC+VCL   +EG     LP CGH+FH ECI +WL +HASCPVC
Sbjct:    1 MAASVECAVCLSVVDEGEKVRQLPACGHVFHQECINMWLSSHASCPVC 48          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig835.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8SNW3_SELML7.530e-1258.00RING-type domain-containing protein (Fragment) n=3... [more]
A0A7R9Z645_9STRA1.600e-1048.15Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1VRK2_9STRA3.210e-1044.44Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S3C9F5_9CHLO3.320e-1051.02Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
A0A2C9UAV0_MANES3.740e-1045.10RING-type domain-containing protein n=2 Tax=Croton... [more]
A0A7S4IUE7_9STRA6.220e-1042.35Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6A1VS05_9ROSI9.650e-1045.10E3 ubiquitin-protein ligase RING1-like n=1 Tax=Mor... [more]
A0A448ZD87_9STRA1.390e-946.03RING-type domain-containing protein n=1 Tax=Pseudo... [more]
A0A7R9ZSU8_9STRA1.780e-952.00Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
I1R3C5_ORYGL1.910e-958.33RING-type domain-containing protein n=2 Tax=Oryza ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 299..339
e-value: 2.2E-7
score: 40.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 298..340
e-value: 8.7E-13
score: 48.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 299..340
score: 12.740079
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 290..354
e-value: 1.1E-18
score: 68.1
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 58..341
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 298..340
e-value: 2.50083E-19
score: 78.5059
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 291..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig835contigP-wetherbeei_contig835:3964..5455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig835.4.1mRNA_P-wetherbeei_contig835.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig835 3419..5808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig835.4.1 ID=prot_P-wetherbeei_contig835.4.1|Name=mRNA_P-wetherbeei_contig835.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=364bp
MATIAGPRAASPEEEEAARELRRAHQYRRCYAGIYIAFTSLLFFGACAWA
VFSQTPQAFLAAVFLAVLAIHLTRKLVRGLWYAARWSENEQMRIDIQMQG
QQLQQQGVAANGGLSDQGRSAFAAFTASRGLAIVQNGGRWSLRNVANPGG
ATGRAGDAGVIDMPEPAQRSVPAVSSAAWMTSAEAMPPRPGDAECGLASP
GAAAAAEGSSAVVFDFGVHPARRSSGGSATISRVEAAASAAAAATGVSVK
DAYMAANGGGNDGGGGSAIRGDGGDGLASVVRRGSTAWARLRMVAEEECS
VCLMGFEEGVNCFLLPCGHIFHAECITLWLENHASCPVCKRDLEAAGKDP
ASVLMITPVATPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD