prot_P-wetherbeei_contig826.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig826.3.1
Unique Nameprot_P-wetherbeei_contig826.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length314
Homology
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BLAST of mRNA_P-wetherbeei_contig826.3.1 vs. uniprot
Match: A0A4D9DDY3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDY3_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.010e-7
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:   72 LGAWQHVVTCARDGVVRLHSLARAYKPRDYVSPVAMGVSAAAGLAQVHDGVDRSLEALRIYRDERTDRGL 141
            LG W+H+++CARDG V LHSLA+A +P D ++P  + +S    L   H+ VDRS   L ++  +R  +GL
Sbjct:  386 LGVWRHLISCARDGRVILHSLAQASRPHDTLTPSVVSLSVRGELLTAHERVDRSDAFLGLHGRKRRAQGL 455
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BLAST of mRNA_P-wetherbeei_contig826.3.1 vs. uniprot
Match: W7U8U7_9STRA (Wd repeat-containing protein 24 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8U7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 8.230e-7
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:   72 LGAWQHVVTCARDGVVRLHSLARAYKPRDYVSPVAMGVSAAAGLAQVHDGVDRSLEALRIYRDERTDRGL 141
            LG W+H+++CARDG V LHSLA+A +P D ++P  + +S    L   H+ VDRS   L ++  +R  +GL
Sbjct:  492 LGVWRHLISCARDGRVILHSLAQASRPHDTLTPSVVSLSVRGELLTSHERVDRSGAFLGLHGGKRRAQGL 561
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig826.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A4D9DDY3_9STRA6.010e-742.86Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U8U7_9STRA8.230e-742.86Wd repeat-containing protein 24 n=1 Tax=Nannochlor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig826contigP-wetherbeei_contig826:5110..6755 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig826.3.1mRNA_P-wetherbeei_contig826.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig826 5110..6757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig826.3.1 ID=prot_P-wetherbeei_contig826.3.1|Name=mRNA_P-wetherbeei_contig826.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=314bp
SSDVTTGLQWIDTPCLPHHESGEMSRDACLVGHFPYRSLLADTDSASSAG
GSAGDGGSGSGEGRPDAPTAVLGAWQHVVTCARDGVVRLHSLARAYKPRD
YVSPVAMGVSAAAGLAQVHDGVDRSLEALRIYRDERTDRGLGVFCEPPEP
TGLREVPAAGSRSPHHSMQRRRASGADILDDGDSPTASPKPASWGGAGAA
MTGMWLGQPPGGGSWGAGASPTLLGGHGGSGNAGGGGGAESPQPDGLDGV
APHPRGILQTLSPAPLPGAAVGAVPSPTAAAAAVTAGALRAAAAGRRVSD
GRAGDGVGGGGIGA
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