prot_P-wetherbeei_contig8258.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8258.3.1
Unique Nameprot_P-wetherbeei_contig8258.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length142
Homology
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Match: D7G6X7_ECTSI (Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X7_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 7.150e-43
Identity = 77/104 (74.04%), Postives = 85/104 (81.73%), Query Frame = 0
Query:    1 MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQGANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGELRPAK 104
            MVTS I HERIRTTVPRAK LR++AD MVTLAK  T H +RQA  VV E  A  KLF+VLGPRYKDR GGYTRVM L +PR GD+ADMAIIE+VDREGELRPA+
Sbjct:   24 MVTSFIYHERIRTTVPRAKELRKVADNMVTLAKKGTPHHQRQAQGVVRENAAVVKLFEVLGPRYKDRPGGYTRVMKLQKPRKGDQADMAIIEFVDREGELRPAR 127          
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Match: A0A835Z8L6_9STRA (Chloroplast 50S ribosomal protein 17 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.810e-42
Identity = 72/108 (66.67%), Postives = 89/108 (82.41%), Query Frame = 0
Query:    1 MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQGANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGELRPAKPTSK 108
            MVTSLI HERI+TTVP+AK L+ +ADQMVT AKT TLH+RR A + + ++GA  KLF VLGPRY++R GGYTR++ LA PR GDKADM +IE+VDR+GELRPA+P  K
Sbjct:   27 MVTSLITHERIKTTVPKAKNLKVLADQMVTHAKTGTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGK 134          
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Match: W7U3L1_9STRA (Ribosomal protein l17 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3L1_9STRA)

HSP 1 Score: 137 bits (345), Expect = 9.760e-39
Identity = 70/105 (66.67%), Postives = 84/105 (80.00%), Query Frame = 0
Query:    1 MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQGANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGELRPAKP 105
            MVTSL++HERIRTT  +AK LRR+AD+MVT AK  +LHARRQAA V+  +   KKLFDVLGPRY  R GGYTRV+ L R RPGD A+M++IE+V R GELRPA+P
Sbjct:   20 MVTSLVEHERIRTTTAKAKELRRVADRMVTWAKDGSLHARRQAAMVIRTKEHLKKLFDVLGPRYLTRAGGYTRVLKLQRFRPGDAAEMSLIEFVGRPGELRPARP 124          
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Match: A0A7S0ASE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASE6_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.020e-38
Identity = 67/105 (63.81%), Postives = 87/105 (82.86%), Query Frame = 0
Query:    1 MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQGANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGELRPAKP 105
            MVTSLIKHERI TT+P+AK LR++AD+MV L K+ +LH+RRQA  V+ E+    KLF++LGPRY++R GGYTRV+ L+RPR GD AD+A+IEYVDR GE+R A+P
Sbjct:   62 MVTSLIKHERIVTTLPKAKELRKLADKMVGLGKSGSLHSRRQAGAVIRERPVLTKLFEILGPRYEEREGGYTRVLKLSRPREGDNADLAVIEYVDRPGEVRAARP 166          
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Match: A0A7S2UAW0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAW0_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.080e-37
Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 0
Query:    1 MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQGANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGELRPAKP 105
            MVTSLIKHERI TT+P+AK LRR+A++++  AK  +LHARR A  +V E+    KLF+VLGPRY+DR GGYTRV+ LAR R GD A MAIIEYVDR GE+R A+P
Sbjct:   24 MVTSLIKHERIETTMPKAKELRRVAEKVIGWAKDGSLHARRMADKIVREKPVLSKLFEVLGPRYQDREGGYTRVLQLARRRQGDNAPMAIIEYVDRPGEIRAARP 128          
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Match: A0A4D9CVS6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVS6_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.050e-36
Identity = 70/105 (66.67%), Postives = 84/105 (80.00%), Query Frame = 0
Query:    1 MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQGANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGELRPAKP 105
            MVTSL++HERIRTT  +AK LRR+AD+MVT AK  +LHARRQAA V+  +   KKLFDVLGPRY  R GGYTRV+ L R RPGD A+M++IE+V R GELRPA+P
Sbjct:   20 MVTSLVEHERIRTTTAKAKELRRVADRMVTWAKDGSLHARRQAAMVIRTKEHLKKLFDVLGPRYLTRAGGYTRVLKLQRFRPGDAAEMSLIEFVGRPGELRPARP 124          
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Match: A0A7S2LPJ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPJ0_9STRA)

HSP 1 Score: 130 bits (326), Expect = 7.180e-36
Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 0
Query:    1 MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQGANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGELRPAKP 105
            MVTSLI HERI TT P+AK L+R+A+ M+   K  +LHARRQA  ++ E+ A  KLF+VLGPRY +R GGYTRV+ LA+PR GD A M+IIEYVDR GE+R AKP
Sbjct:   24 MVTSLIYHERIVTTTPKAKELKRLAEWMIGFGKDGSLHARRQADAILREKPALTKLFEVLGPRYAERDGGYTRVLQLAKPRTGDNAPMSIIEYVDRPGEIRAAKP 128          
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Match: A0A7S3QJX6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJX6_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.730e-35
Identity = 64/105 (60.95%), Postives = 83/105 (79.05%), Query Frame = 0
Query:    1 MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQGANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGELRPAKP 105
            MVTSLI HERI TTVP+AK +R +A++++  AK  +LH+RR A  VV E+ A  KLF+VLGPRY+DR GGYTRV+ L++PR GD A MA++EYVDR GE+R A+P
Sbjct:   24 MVTSLIYHERIVTTVPKAKEVRHLAEKIIKHAKNGSLHSRRLADKVVREEPAVTKLFEVLGPRYQDREGGYTRVLKLSKPRQGDNAPMAVLEYVDRPGEIRAARP 128          
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Match: A0A6T7JZV4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6T7JZV4_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.070e-35
Identity = 68/117 (58.12%), Postives = 87/117 (74.36%), Query Frame = 0
Query:    1 MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQGANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGELRPAKPTSK--MAWFNSM 115
            MVTSLIKHERI TT+P+AK LR +AD++V  AK   +HA++ A  VV E+    KLF+V+GPRY+DR GGYTRVM L+RPR GD A MA+IEYVDR GE+R A+   K    +FN++
Sbjct:   25 MVTSLIKHERIVTTLPKAKELRHLADKVVGYAKKGDVHAKQLALRVVREKPMVTKLFEVMGPRYEDRDGGYTRVMKLSRPRRGDNAPMAVIEYVDRPGEIRAARVPEKRKQKYFNNL 141          
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Match: A0A7S3PMY3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMY3_9STRA)

HSP 1 Score: 128 bits (321), Expect = 3.650e-35
Identity = 66/108 (61.11%), Postives = 84/108 (77.78%), Query Frame = 0
Query:    1 MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQGANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGELRPAKPTSK 108
            MVTSLI +ERI+TTVP+AK LRR+AD MVTL K  +LHARRQ+  VV ++ A  KLFDVLGPRY +R GG+TR++ +   R GD ADM ++E+VD+EGELR AKP  +
Sbjct:   24 MVTSLIHYERIKTTVPKAKELRRVADWMVTLGKKGSLHARRQSLKVVRDKAAMHKLFDVLGPRYINRPGGFTRIVRVGHRR-GDAADMCVMEFVDKEGELRKAKPVDE 130          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8258.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6X7_ECTSI7.150e-4374.04Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectoc... [more]
A0A835Z8L6_9STRA2.810e-4266.67Chloroplast 50S ribosomal protein 17 n=1 Tax=Tribo... [more]
W7U3L1_9STRA9.760e-3966.67Ribosomal protein l17 n=1 Tax=Nannochloropsis gadi... [more]
A0A7S0ASE6_9STRA1.020e-3863.81Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S2UAW0_9STRA2.080e-3764.76Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A4D9CVS6_9STRA3.050e-3666.67Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2LPJ0_9STRA7.180e-3662.86Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3QJX6_9STRA2.730e-3560.95Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6T7JZV4_9STRA3.070e-3558.12Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3PMY3_9STRA3.650e-3561.11Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036373Ribosomal protein L17 superfamilyGENE3D3.90.1030.10Ribosomal protein L17coord: 1..94
e-value: 4.9E-35
score: 122.3
IPR036373Ribosomal protein L17 superfamilySUPERFAMILY64263Prokaryotic ribosomal protein L17coord: 1..97
IPR000456Ribosomal protein L17TIGRFAMTIGR00059TIGR00059coord: 1..95
e-value: 3.1E-31
score: 106.0
IPR000456Ribosomal protein L17PFAMPF01196Ribosomal_L17coord: 1..94
e-value: 1.8E-32
score: 112.1
IPR000456Ribosomal protein L17PANTHERPTHR14413RIBOSOMAL PROTEIN L17coord: 1..108
IPR000456Ribosomal protein L17PROSITEPS01167RIBOSOMAL_L17coord: 11..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8258contigP-wetherbeei_contig8258:1741..2166 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8258.3.1mRNA_P-wetherbeei_contig8258.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8258 1704..2351 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8258.3.1 ID=prot_P-wetherbeei_contig8258.3.1|Name=mRNA_P-wetherbeei_contig8258.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=142bp
MVTSLIKHERIRTTVPRAKALRRIADQMVTLAKTDTLHARRQAATVVMEQ
GANKKLFDVLGPRYKDRVGGYTRVMLLARPRPGDKADMAIIEYVDREGEL
RPAKPTSKMAWFNSMFLPNMASPSAAAAVRATTPYRPAGPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036373Ribosomal_L17_sf
IPR000456Ribosomal_L17