prot_P-wetherbeei_contig822.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig822.1.1
Unique Nameprot_P-wetherbeei_contig822.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length860
Homology
BLAST of mRNA_P-wetherbeei_contig822.1.1 vs. uniprot
Match: D7FPC7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC7_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 4.780e-34
Identity = 113/319 (35.42%), Postives = 162/319 (50.78%), Query Frame = 0
Query:  468 FGIAVVFLTVPTLTLAAXXXXXXXXXXXXSGLSGSRRRVTDSKRCQALLIFGQLHLAHEVWRGIREGQETMAFKTARFLEAVLEAAPQLLLQSYILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVISLLSLAWETANTLDRGWVEE---EDARRRPAVAKGTPAWRAALPRARNLFCVWLFHVAEIAGRGISLVALALAAGWWTPLCLAFSMAVRLAIGLLTEQKDLPLFKVVIKALASVLLDTVWDHRRAYHLAAALSAAECAAYLAVA-VTLRESRLGVTHSLQVAALATAGAAWGLRILLDILVRQPLHWSHL 782
            F +AV+F+ VPT  + A            S +SGSR R  + K    LL   QL L  E   G+++ +ET  +KTA+F+EA  EAAPQ+LLQ+  +                             S++ S+ S++WET + LDRGW EE   E AR+  +   G  A R  +     L  +W+FHV E+  RG+SL  LAL    W+ L +A     R+ I   TE  DL   KV+IKALA+ LLD++WD + AY  A+  +  E + +  VA + LR     +  +L   A   AG+ + LR +LD+ +R PLHW  L
Sbjct:  192 FVLAVIFIVVPTSVVVA------------STMSGSRERDRNKK---ILLTVLQLRLVWEARDGLKKRRETRDYKTAKFVEACFEAAPQMLLQTVAVVSLWNDKETDNSDAFVAF-----------SIMNSVFSVSWETMSALDRGWAEEMVEERARQGTSWPCGASAHRWLV-----LLSLWVFHVCEVGLRGLSLSMLALTLRGWSALVMAGVWGARVGIAKATEASDLKTTKVLIKALAACLLDSIWDSKSAYIAASVCTLLESSTFFVVASLELRGENTPLEEALSEVAW-VAGSVYALRFVLDLWLRAPLHWGTL 478          
BLAST of mRNA_P-wetherbeei_contig822.1.1 vs. uniprot
Match: A0A6H5L3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3J2_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 9.090e-28
Identity = 96/266 (36.09%), Postives = 137/266 (51.50%), Query Frame = 0
Query:  521 LHLAHEVWRGIREGQETMAFKTARFLEAVLEAAPQLLLQSYILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVISLLSLAWETANTLDRGWVEE---EDARRRPAVAKGTPAWRAALPRARNLFCVWLFHVAEIAGRGISLVALALAAGWWTPLCLAFSMAVRLAIGLLTEQKDLPLFKVVIKALASVLLDTVWDHRRAYHLAAALSAAECAAYLAVA-VTLRESRLGVTHSLQVAALATAGAAWGLRILLDILVRQPLHWSHL 782
            L L  E   G+++G+ET  +KTA+F+EA  EAAPQ+LLQ+  +                             S++ S+ S++WET + LDRGW EE   E AR+  +   G  A R  +     L  +W+FHV     RG SL  LAL    W+ L +A     R+AI   TE  DL   KV+IKALA+ LLD++WD + AY  A+  +  E + +  VA + LR     +  +L   A   AG+ + LR +LD+ +R PLHW  L
Sbjct:  241 LRLVWEARDGLKKGRETRDYKTAKFVEACFEAAPQMLLQTVAVVSLWNDKEADNSDMFVAF-----------SIMNSVFSVSWETMSALDRGWAEEMVEERARQGTSWPCGASAHRWLV-----LLSLWVFHVGL---RGSSLAVLALTLRGWSALVMAGVWGARVAIAKATEASDLKTTKVLIKALAACLLDSIWDSKSAYIAASVCTLLESSTFFVVASLELRGENTPLEEALSEVAW-VAGSVYALRFVLDLWLRAPLHWGTL 486          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig822.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPC7_ECTSI4.780e-3435.42Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5L3J2_9PHAE9.090e-2836.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 194..406
e-value: 9.4E-57
score: 194.5
IPR018629XK-related proteinPFAMPF09815XK-relatedcoord: 438..684
e-value: 2.1E-20
score: 73.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 208..267
e-value: 4.2E-7
score: 29.6
coord: 274..315
e-value: 2.4E-7
score: 30.4
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 328..350
score: 7.496336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..190
NoneNo IPR availablePANTHERPTHR48065OS10G0469600 PROTEINcoord: 237..321
NoneNo IPR availablePANTHERPTHR48065:SF13RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3coord: 237..321
NoneNo IPR availablePANTHERPTHR48065:SF13RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3coord: 313..392
coord: 212..278
NoneNo IPR availablePANTHERPTHR48065OS10G0469600 PROTEINcoord: 313..392
coord: 212..278
NoneNo IPR availablePANTHERPTHR48065:SF13RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3coord: 262..345
NoneNo IPR availablePANTHERPTHR48065OS10G0469600 PROTEINcoord: 262..345
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 203..395

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig822contigP-wetherbeei_contig822:2432..6185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig822.1.1mRNA_P-wetherbeei_contig822.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig822 2405..6350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig822.1.1 ID=prot_P-wetherbeei_contig822.1.1|Name=mRNA_P-wetherbeei_contig822.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=860bp
MNETDRNALESLYHVTSGPRWRTQANWASVTRDASPKPTFEATSSTKTSV
AAAASDAAASPMLSKNPFAPPQPQQRPSATNPFAPHHAAVGKTPAPNKNP
FAGKERPSKGNPFAPTSPSNATGIIASALPVRRWPTGSTMPSPATTTLVA
GTNLTTATTAAFSTATTTASTFPSTSDVGGGSSSTGGSGRSAALPPRPFG
VQLSRGGRVRELRLDDNGLEGVLPDAIGALDALRHCRLSQNRLAGGVPDS
FGECSALQWLSLAANRLSGPVPASLGGLLQLIELDLSQNQLSGPIPASLG
GLANLQTLSLEHNQLSGPIPAELGRLSRLVYLRLSHNRLDGRIPDLAGLK
SAQELWLNGNALSGKIPASLGRELPALRVLVLRDNLLRGALPDTLVRRLG
RERVLTAIAPGNRGLSDPDTALLLHARPLASRLDRGLLLLSGALGYVDLA
TDAAAATTFYVSGRIAAFGIAVVFLTVPTLTLAAAALLAPEGGGGGSGLS
GSRRRVTDSKRCQALLIFGQLHLAHEVWRGIREGQETMAFKTARFLEAVL
EAAPQLLLQSYILAASSADDDDDDGGSNGGGNGGGPSAVVVVSVVISLLS
LAWETANTLDRGWVEEEDARRRPAVAKGTPAWRAALPRARNLFCVWLFHV
AEIAGRGISLVALALAAGWWTPLCLAFSMAVRLAIGLLTEQKDLPLFKVV
IKALASVLLDTVWDHRRAYHLAAALSAAECAAYLAVAVTLRESRLGVTHS
LQVAALATAGAAWGLRILLDILVRQPLHWSHLDSGSGVGGGAWPLWIKAA
ATTRGSSSAVVDISDINDVGSSPLSSEKAGGVNATALRAVGGSETRVPSP
ARENQSAVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR018629XK-rel
IPR001611Leu-rich_rpt