prot_P-wetherbeei_contig8205.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8205.1.1
Unique Nameprot_P-wetherbeei_contig8205.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length467
Homology
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A6H5KYC8_9PHAE (RNase III domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYC8_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 2.380e-37
Identity = 87/180 (48.33%), Postives = 112/180 (62.22%), Query Frame = 0
Query:   14 QVALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPR-SAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTKIMADCFEAVLGAMYLDS---QSMAPIHSLLASLIPCY 189
            Q +LP +E  L YRF DR+LLL ALTH+S+ NE    ++GD DELEWLGD+VLQ+A+SSWLF + K  R S+ +LS  RQRFVD  AC +FA QLNL                              + Y+R+GH Q   GTKI+ADCFEAVLGA+Y+D+     + PIH++LA +IP Y
Sbjct:   11 QHSLPVVEHALGYRFGDRRLLLTALTHRSFCNE-THTASGDFDELEWLGDSVLQLAVSSWLFRSAKGSRRSSGQLSATRQRFVDSHACESFARQLNL------------------------------LPYLRIGHGQPVGGTKILADCFEAVLGAVYVDAGGCSDLEPIHAILARVIPSY 159          
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A835Z0E4_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0E4_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.830e-30
Identity = 82/184 (44.57%), Postives = 106/184 (57.61%), Query Frame = 0
Query:   14 QVALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGT--KIMADCFEAVLGAMYLDSQSMAP------IHSLLASLIPCY 189
            Q  +PA E  LRY F ++ LLL+ALTH+SY NE    +TGDND LEWLGD+VLQ AIS WL+ +  + RS  +L+ +RQ+FVD  AC  +A++L L                                 MR GH Q + GT  K+ ADCFEAVLGAMYLDS+SM+P      I  +LA +IP +
Sbjct:  389 QQLVPAAEAALRYTFSNKLLLLQALTHRSYCNENR-TATGDNDALEWLGDSVLQHAISDWLYNSFAE-RSVHKLTDLRQQFVDTTACADYASRLGLP------------------------------DMMRTGHGQATRGTNTKVSADCFEAVLGAMYLDSRSMSPDAPFVPIFRVLADVIPAF 540          
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A835ZIJ8_9STRA (RNase III domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ8_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 6.220e-18
Identity = 73/194 (37.63%), Postives = 96/194 (49.48%), Query Frame = 0
Query:   12 GRQVALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDP-RSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTKIMADCFEAVLGAMYLDSQSMA------PIHSLLASLI---PCYARTASA 195
            G Q  +PA E  L Y F D+ LLL+ALT KSYVNE    +TGDN  +EWLGD VLQ A+S WL+ +T    R   R++  R+ +VD  AC  +A  L L R + + A                            G +      K+ AD FEAVLGA++LD +  A      P+  +LA +I    C   TASA
Sbjct:   59 GLQSLVPAAEEALGYEFLDQMLLLQALTLKSYVNEVE-SATGDNGAMEWLGDCVLQHAVSDWLYTSTAATHRQEGRMTERRKAYVDTTACARYAQCLGLPRLLRTGA----------------------------GASASLTSRKVQADAFEAVLGAVHLDCRDAAAAAVPSPVVRILAKVIRGFACAQATASA 223          
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A3M1LL13_9CHLR (Ribonuclease 3 n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1LL13_9CHLR)

HSP 1 Score: 84.3 bits (207), Expect = 6.790e-15
Identity = 58/174 (33.33%), Postives = 83/174 (47.70%), Query Frame = 0
Query:   17 LPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTKI----MADCFEAVLGAMYLDSQSMAPIHSLLASLI 186
            L A+E+ L  RF DR LLL+ALTH+SY+NE   ++  DN  LE+LGD VL    + WL+    + +   RL+ +R   V       FA QL+L                               +Y+RLG  +E  G +     + D FEA +GA+YLD Q +  + + L  LI
Sbjct:    4 LEALESHLGVRFEDRSLLLRALTHRSYLNENPDLALEDNQRLEFLGDAVLDFLTAEWLYHRFPEFQEG-RLTSLRAALVRTATLARFARQLDLG------------------------------TYLRLGRGEEESGGRQRRANLCDAFEAFIGALYLD-QGLEAVRAFLEPLI 145          
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A7C1H438_9DELT (Ribonuclease 3 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C1H438_9DELT)

HSP 1 Score: 84.3 bits (207), Expect = 7.190e-15
Identity = 53/160 (33.12%), Postives = 76/160 (47.50%), Query Frame = 0
Query:   17 LPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTK----IMADCFEAVLGAMYLDS 172
            L  +E  L+YRF D+ LL  ALTH+S++NE A  S  DN+ LE+LGD VL + +S  L     D    Q LS +R   V++      A   N+                                Y+ LGH +E  G +    ++A+C EAV+GA+Y+DS
Sbjct:    9 LKKLEKTLQYRFEDKSLLSTALTHRSFINENASYSFSDNERLEFLGDAVLGLCVSDILVKKFSDLAEGQ-LSKLRSHLVNESFLAGLAIDFNIG------------------------------DYLLLGHGEERSGGRGKISLLANCMEAVIGAIYMDS 137          
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A3M1DRJ7_9CHLR (Ribonuclease 3 n=1 Tax=Thermoflexia bacterium TaxID=2420334 RepID=A0A3M1DRJ7_9CHLR)

HSP 1 Score: 84.0 bits (206), Expect = 2.290e-14
Identity = 58/186 (31.18%), Postives = 90/186 (48.39%), Query Frame = 0
Query:   15 VALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTKI----MADCFEAVLGAMYLDSQSMAPIHSLLASLIPCYARTASAA 196
            V L  ++  L Y FRDR LLL+ALTH SY++E       DN  LE+LGD VL + ++ W++    + R  + ++ +R   V + +   FA QL +                               S +RLG  +E  G +     + D FEA++GA+YLD   + P+ +L+ +L+P  A T  AA
Sbjct:   50 VPLEHLQRQLNYTFRDRGLLLRALTHPSYLHEHPEAGL-DNQRLEFLGDAVLSLTVAEWIYHRYPEFREGE-MTRLRAALVSEESLARFATQLGVG------------------------------SALRLGRGEEERGGRERPANLCDAFEALIGALYLDG-GLEPVQALVRTLVPPIAETILAA 202          
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: UPI0009BC4ED3 (ribonuclease III n=1 Tax=Oceanobacillus timonensis TaxID=1926285 RepID=UPI0009BC4ED3)

HSP 1 Score: 81.3 bits (199), Expect = 7.090e-14
Identity = 57/187 (30.48%), Postives = 88/187 (47.06%), Query Frame = 0
Query:   15 VALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTK----IMADCFEAVLGAMYLDSQSMAPIHSLLASLIPCYARTASAAV 197
            + L  +E  L   F+ +KLL +A TH SYVNE   +   DN+ LE+LGD VL++A+S +L+   +D    + ++ +R   V + +   FA Q +  +                              Y+ LG  +E  G +    I+AD FEA LGA+YLD    A +H L   + P     A+A+V
Sbjct:    1 MELSQLEQKLGITFQQKKLLKEAFTHSSYVNEYKKIKLNDNERLEFLGDAVLELAVSQYLYRNNQDMPEGE-MTKIRAAIVCEASLTVFAKQFDFGQ------------------------------YILLGKGEEQTGGRQRPAILADAFEAFLGALYLDQGFDAVLHFLNTRIFPALTVDATASV 156          
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A7C7UB02_9CHLR (Ribonuclease 3 n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7UB02_9CHLR)

HSP 1 Score: 80.9 bits (198), Expect = 1.310e-13
Identity = 53/159 (33.33%), Postives = 74/159 (46.54%), Query Frame = 0
Query:   17 LPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTKI----MADCFEAVLGAMYLD 171
            L  I+  L +RFRD  LLL+ALTH SYVNE    +TGDN  LE+LGD VL     +W++    D     R++ +R   V        A Q+ + ++                              +RLGH +E  G +     + D FEAV+GA+YLD
Sbjct:   16 LRTIQQALGHRFRDLNLLLRALTHPSYVNEHPEDATGDNQRLEFLGDAVLDFVAGAWVYRRYPDFDEG-RMTRLRAALVRTKTLARLARQVGIGKA------------------------------LRLGHGEEEAGGRERDANLCDAFEAVVGALYLD 143          
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: A0A3M1DMJ4_9DELT (Ribonuclease 3 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1DMJ4_9DELT)

HSP 1 Score: 80.5 bits (197), Expect = 1.430e-13
Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = 0
Query:   14 QVALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQ-RLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTK----IMADCFEAVLGAMYLD 171
            + +L  +ET L YRF +R LL+KALTHKSY NE       DN+ LE+LGD VL +A+S  +F   ++PR A+  ++ +R   V + +  A A +L +                                +M LG  +E  G +    +++D  EA+LGA++LD
Sbjct:    2 EESLCELETALGYRFSNRDLLVKALTHKSYANEHRDAGARDNERLEFLGDAVLDLAVSETIFA--QEPRLAEGEMTRVRAEVVSEPSLAAVARELGVG------------------------------DHMLLGRGEELTGGREKESLLSDAMEAILGAIFLD 132          
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Match: UPI00068E716F (ribonuclease III n=1 Tax=Butyrivibrio sp. AE2032 TaxID=1458463 RepID=UPI00068E716F)

HSP 1 Score: 80.1 bits (196), Expect = 1.880e-13
Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 0
Query:   17 LPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWVSTGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGACGAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQESEGTK----IMADCFEAVLGAMYLD 171
            L   E  + Y FRDR LL++ALTH S+VNE+      D + LE+LGD VL+M  S++LF    D +  + +S +R   V +GA    A QLN+ +                              Y++LG  +E+ G +    I+AD  EAV+GA++LD
Sbjct:    7 LSRFEKVIGYTFRDRALLVQALTHSSFVNEQKINKKPDYERLEFLGDAVLEMISSAYLFRTYPDKKEGE-MSKIRASLVCEGALAFDAQQLNIKQ------------------------------YIQLGKGEEATGGRNKESIIADVMEAVIGALFLD 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8205.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYC8_9PHAE2.380e-3748.33RNase III domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z0E4_9STRA1.830e-3044.57RNase III domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZIJ8_9STRA6.220e-1837.63RNase III domain-containing protein n=1 Tax=Tribon... [more]
A0A3M1LL13_9CHLR6.790e-1533.33Ribonuclease 3 n=1 Tax=Chloroflexi bacterium TaxID... [more]
A0A7C1H438_9DELT7.190e-1533.13Ribonuclease 3 n=1 Tax=Deltaproteobacteria bacteri... [more]
A0A3M1DRJ7_9CHLR2.290e-1431.18Ribonuclease 3 n=1 Tax=Thermoflexia bacterium TaxI... [more]
UPI0009BC4ED37.090e-1430.48ribonuclease III n=1 Tax=Oceanobacillus timonensis... [more]
A0A7C7UB02_9CHLR1.310e-1333.33Ribonuclease 3 n=1 Tax=Anaerolineae bacterium TaxI... [more]
A0A3M1DMJ4_9DELT1.430e-1332.52Ribonuclease 3 n=1 Tax=Deltaproteobacteria bacteri... [more]
UPI00068E716F1.880e-1333.96ribonuclease III n=1 Tax=Butyrivibrio sp. AE2032 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000999Ribonuclease III domainSMARTSM00535riboneu5coord: 32..195
e-value: 6.3E-19
score: 78.9
IPR000999Ribonuclease III domainPFAMPF14622Ribonucleas_3_3coord: 30..172
e-value: 1.1E-16
score: 61.2
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 17..173
score: 22.042009
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 32..172
e-value: 5.70117E-23
score: 92.2906
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10Ribonuclease III domaincoord: 14..196
e-value: 1.5E-29
score: 105.0
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 17..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..270
NoneNo IPR availablePANTHERPTHR11207:SF0RIBONUCLEASE 3coord: 5..310
IPR011907Ribonuclease IIIPANTHERPTHR11207RIBONUCLEASE IIIcoord: 5..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8205contigP-wetherbeei_contig8205:251..2583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8205.1.1mRNA_P-wetherbeei_contig8205.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8205 88..2583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8205.1.1 ID=prot_P-wetherbeei_contig8205.1.1|Name=mRNA_P-wetherbeei_contig8205.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=467bp
MEGRGNENGPGGRQVALPAIETCLRYRFRDRKLLLKALTHKSYVNEEAWV
STGDNDELEWLGDTVLQMAISSWLFGATKDPRSAQRLSMMRQRFVDKGAC
GAFAAQLNLSRSVCSSACSVVTRICCASAACVAWLIARQISYMRLGHAQE
SEGTKIMADCFEAVLGAMYLDSQSMAPIHSLLASLIPCYARTASAAVFTG
GVAAGAINSAAGGIGRIGGIGGIGGIGGIGGEASGGDDGGADPAFRDRDG
SALLPPLLPPSSPPPPSNSPSESNRLMNAAHKLVQATKLLRHPAGGARVA
AISIPPVASAAAAAMAAPGAPGGGSGGDGSGRAGGTGAGGLGSGGFEQSW
NARTPPKSLWNLSSQFGTVGLRSDFSLSALEPAGMALDSATASPLLSLSP
SRTEAGNQARSHVDFVQALRDFSAALQSFRRAVMREGLLSCGSPAFCAAF
GEKSAAFYREKQANKKD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000999RNase_III_dom
IPR036389RNase_III_sf
IPR011907RNase_III