prot_P-wetherbeei_contig8050.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8050.1.1
Unique Nameprot_P-wetherbeei_contig8050.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length414
Homology
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 1.150e-102
Identity = 178/286 (62.24%), Postives = 208/286 (72.73%), Query Frame = 0
Query:    1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLGEGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAPRGLPGMPQGPGMYGAMPYMMAAGPGMPGQ 286
            GHFVRR+ RAGQADWTN+YVK LP+ W + KLREEF K GA+TSCK+Q++P  G+       E +           GFGFVNFEEHE AVKA+E  N  ++ +GE  T L+ +RAQKK ER REL  K++ +K+ERMN++QGVN+YVKNLDE VTEDA+REAFAPYGTITSARVM D+S                 QSKGFGFVCFSAPEEATKA+ EMN KML NKPIYVALAQR+EVRR QLEAQ++QRT GM PRG+P  P   GMYG MPY M A PGMP Q
Sbjct:  203 GHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQ-----GDESKEKXXXXXXXXXGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNN--------------NQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYG-MPYWMGAQPGMPQQ 468          
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 311 bits (798), Expect = 1.790e-96
Identity = 179/292 (61.30%), Postives = 202/292 (69.18%), Query Frame = 0
Query:    1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKL-GEGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAPRGLPGMPQGPGMYG-AMPYMMAAGPGMPGQRGGM 290
            GHFVRRN+RAGQADWTN+YVKN+P  W EEKLR EFAKFG I S K+Q                   +   +S ++GFGF+NFE+HE A  AV   NG  + G   +  ELF  RAQK+ ERQREL  KYE LKVERMN+YQGVNLYVKNLDE V E ALREAFA  GTITS R+MKD               A+ G SKGFGFVCFS+PEEATKAVQEMNN+M+A+KPIYVALAQRKEVRRAQLEAQY+Q+  G+ PRG  G  Q PGMYG  MPYMM      PGQ GGM
Sbjct:  224 GHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRE-----------------SSDPASLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKD---------------AVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRGPMGAMQ-PGMYGMGMPYMM------PGQPGGM 476          
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA)

HSP 1 Score: 286 bits (732), Expect = 5.100e-87
Identity = 163/289 (56.40%), Postives = 204/289 (70.59%), Query Frame = 0
Query:    1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLG--EGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAPRGLPGMPQGPGMYGAMP-YMMAAGPGMPGQ 286
            GHFV+R +RA  +DWTN+Y+KN+P +WSEEKL +EF KFG +TS K  +     +P E    EG    K A     G+GFVN+ +HE AVKAVE  NGLKL   +GE+  E++A RAQKK ER+REL  K+E LK ER+N+YQGVNLYVKNLD+ +T++ LRE F  YGTITSARVM+DS+G                 S+GFGFVC+SAPEEATKAV E N K++  KP+Y+ALAQR+EVRRAQLEAQY++   G+ PRG+P + Q PGMYGAMP Y M  G G+P Q
Sbjct:  180 GHFVKRQDRASASDWTNLYIKNIPEDWSEEKLNDEFGKFGEVTSVKAVIKKM--DPVE----EGAPPPKVAG----GYGFVNYADHESAVKAVEAMNGLKLKHPDGEER-EMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRDSNG----------------NSRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIP-LGQ-PGMYGAMPMYAMPPGQGIPPQ 439          
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: F0YJH2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJH2_AURAN)

HSP 1 Score: 249 bits (637), Expect = 2.320e-73
Identity = 154/304 (50.66%), Postives = 189/304 (62.17%), Query Frame = 0
Query:    1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLGEGED-------MTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTS---------GMAPRGLPG-MPQG--PGMYGA-----MPYMMAAG 280
            GHFVRR ER+GQ+DWTN+YVKN PA+W EE LR+ F  FGAITSCK                       AA++    FG+VNFE H+ AV A++  NG+    G+           LF  RAQKK+ER+REL  K++  K+ER+ +YQGVNL+VKNLD+ + +D LRE FA YGTITSARVM++             PA   G S+GFGFVCFS+PEEA KAV EMNNK++  KPI+VALAQRKEVRRAQLEAQ++QR +          M P G+P   PQG  P   GA     MP M AAG
Sbjct:  173 GHFVRRTERSGQSDWTNLYVKNFPADWDEETLRKAFETFGAITSCKA----------------------AAAADGSAFGWVNFEAHDAAVAAMDALNGIAELPGQAGGAPTTLKAPLFVGRAQKKIERERELKAKFDAAKIERIKKYQGVNLFVKNLDDGLDDDQLRENFAEYGTITSARVMRE-------------PAT--GTSRGFGFVCFSSPEEAAKAVTEMNNKLVLGKPIFVALAQRKEVRRAQLEAQHAQRRTTAPYGAHPGAMGPAGVPPHAPQGLHPAHLGAPYGTAMPIMYAAG 439          
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A067BXY4_SAPPC (Polyadenylate-binding protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXY4_SAPPC)

HSP 1 Score: 248 bits (632), Expect = 1.820e-72
Identity = 151/290 (52.07%), Postives = 187/290 (64.48%), Query Frame = 0
Query:    1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLGE--GEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQ-RTSGMAP-RGLPGMPQGPGMYGAMPYMMAAGPGMPGQ 286
            GHF +R +R   ADWTN YVKN+P  W +  LR+EF  FG+ITSC +            A++EG           +GFGFVNF+E E A KAVE  N   +G+  G D+  L+  +AQK+ ER+REL  K+E LK+ER+N+YQGVNLYVKNLD+++ +D LREAF   GTITS R+MKD SG                 S+GFGFVCF+ PEEATKAV +MN K+++ KPIYVALAQRKEVRRAQLEAQ++Q R SGM   RG+P   Q P MYGA P   A    MP Q
Sbjct:  193 GHFQKRQDRPDLADWTNCYVKNIPHNWDDATLRKEFEVFGSITSCVVMKD---------ASSEGN----------RGFGFVNFDEPESAQKAVEALNDKVVGQEDGADIA-LYVGKAQKRSERERELRNKFEALKMERINKYQGVNLYVKNLDDQLNDDELREAFTTCGTITSCRIMKDPSG----------------NSRGFGFVCFATPEEATKAVTDMNGKLVSGKPIYVALAQRKEVRRAQLEAQHAQQRASGMVVGRGMP--MQQPPMYGAAPMFYAQPNQMPPQ 444          
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN)

HSP 1 Score: 247 bits (630), Expect = 4.060e-72
Identity = 144/280 (51.43%), Postives = 186/280 (66.43%), Query Frame = 0
Query:    1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNG--LKLGEGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAPRGLPGMPQGPGMYGAMPYMMA 278
            GHF +R ER    +WTN YVKN+P  W+EE++R+EF  FG + S  +                      A +   KGFGFVNFE+ EGA KAVE  NG   K  +G D+ EL+  RAQK+ ER+REL  K+E LK+ER+++YQGVNLYVKNLD+++T++ LREAF  +GTITS+R+M+D++G                 S+GFGFVCFS PEEA KAV EMN K+++ KP+YVALAQRKEVRRAQLEAQ++QR +G+  RG+P M Q P MYGA P   A
Sbjct:  189 GHFQKRQERPDVDEWTNCYVKNIPQXWTEEEMRKEFEPFGTVVSLVVMKD-------------------AGAEHHKGFGFVNFEKSEGAHKAVEALNGKVYKNPDGSDV-ELYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRDTAG----------------VSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQR-AGLMGRGIP-MGQPP-MYGAAPMFYA 429          
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A1E7FQC9_9STRA (Polyadenylate-binding protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQC9_9STRA)

HSP 1 Score: 245 bits (625), Expect = 2.100e-71
Identity = 150/295 (50.85%), Postives = 192/295 (65.08%), Query Frame = 0
Query:    1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLG---EGEDMT-ELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAPRGLPGMPQGPGMYGAMPYMMAAGPGMPG--QRGG 289
            GHF+ RN+R GQ D+TN YVKN+P +W +E+L +EFA+FG I S              AA T+ +        ++ GFGFVNF EHE A  +VE  NG       +GE++  E+F  RAQKK ER RE+  K+E  K++R++++QGVNLYVKNL++ VT+D LR+ FA  GTITSAR+MKD                  G+S+GFGFVCFS+PEEAT+AV EMN K++ANKPI+VALAQR+EVRRAQLEAQ++ R  G    G PGM +GP M G M Y     PGMP   QRGG
Sbjct:  175 GHFIGRNQRPGQDDFTNCYVKNIPLDWDDERLNKEFAQFGEIAS--------------AAETDDK------KIESLGFGFVNFVEHESAAASVEALNGKNYTHTIDGEEVEREMFVGRAQKKAERDREMRSKHEAEKMDRISKFQGVNLYVKNLEDVVTDDMLRDEFAAMGTITSARIMKDMG--------------KDGRSRGFGFVCFSSPEEATRAVNEMNGKLIANKPIFVALAQRREVRRAQLEAQHANRNVGPGGPGQPGMMRGP-MGGPMGY-----PGMPMYMQRGG 429          
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A7S3LEE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEE9_9STRA)

HSP 1 Score: 242 bits (617), Expect = 2.610e-71
Identity = 154/316 (48.73%), Postives = 195/316 (61.71%), Query Frame = 0
Query:    1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAK--GFGFVNFEEHEGAVKAVEHFNGLKLG---EGEDMTE-LFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQR----TSGM--APRG----LPGMPQ-------GPGMYGAMPYMMAAGPGMPGQRGGMTAQ 293
            G F+RRN+R     WTN YVKN+P EW++++L +EFA+FG I S  +       +  E    EGE  AK  S + +  GFGFVNF EHE A  AVE  NG +     +GE+  + L+  RAQKK ER+REL  K+E  K++R++++QGVNLYVKNLD+ VT+D LR+ F   GTITSARVMKD                  G+S+GFGFVCFS PEEAT+AV EMN K+LA KP++VA+AQR++VRRAQLEAQ++ R      GM  AP G     PG+P        G GM  A P MM   P M G RGG   Q
Sbjct:  199 GQFMRRNDRPDVNSWTNCYVKNIPLEWNDDRLNKEFAQFGEIVSATVAKGVKKNKKKEEPPAEGEEPAKEESEEPQSLGFGFVNFLEHEAAAAAVEQLNGKEYTTTVDGEETQQALYVGRAQKKAERERELRAKFEAEKMDRISKFQGVNLYVKNLDDSVTDDMLRDEFTSMGTITSARVMKD---------------VKDGRSRGFGFVCFSTPEEATRAVNEMNGKLLAGKPVFVAVAQRRDVRRAQLEAQHANRGPPGQMGMMRAPMGGPMQYPGVPMYMQRPGPGAGMQPAYPTMM---PQMMGGRGGAVPQ 496          
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD)

HSP 1 Score: 243 bits (620), Expect = 1.250e-70
Identity = 146/289 (50.52%), Postives = 185/289 (64.01%), Query Frame = 0
Query:    1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNG--LKLGEGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQRTSGMAP-RGLPGMPQGPGMYGAMPYMMAAGPGMPGQ 286
            GHF +R +R    DWTN YVKN+P++WS+E L +EF  FG + S  +                      A +   +GFGFVNFEE EGA KAVE  NG   +  +G D+ EL+  +AQK+ ER+REL  K+E LK+ER+N+YQGVNLYVKNLD+++ +D LREAFA  GTITS+RVM+D +G                 S+GFGFVCFS PEEA KAV EMN K+++ KP+YVALAQRKEVRRAQLEAQ++ + +G+   RGLP M Q P MYGA P        MP Q
Sbjct:  194 GHFQKRQDRPDIDDWTNCYVKNIPSQWSDEDLLKEFKPFGPVLSAVIMRD-------------------ADAELNRGFGFVNFEESEGAHKAVEALNGKVYQTADGSDL-ELYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLNDDELREAFASAGTITSSRVMRDQNG----------------NSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAHQRAGLVVGRGLP-MGQPP-MYGAAPMFYTQPNQMPPQ 444          
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.890e-70
Identity = 149/290 (51.38%), Postives = 187/290 (64.48%), Query Frame = 0
Query:    1 GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLSPPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLKLGEGEDMTE--LFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNLDEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKGFGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQ-RTSGMAP-RGLPGMPQGPGMYGAMPYMMAAGPGMPGQ 286
            GHF +R +R    +WTN YVKN+P  W +  LR+EF  FGAI+SC +                      A+S + +GFGFVNFEE E A +A E  N  K+   ED  E  L+  +AQK+ ER+REL  K+E LK+ER+N+YQGVNLYVKNLD+++T++ LREAFAP GTITS R+M+D             PA   G S+GFGFVCF+ PEEATKAV EM+ K+++ KPIYVALAQRKEVRRAQLEAQ++Q R +GM   RG+P   Q P MYGA P   A    MP Q
Sbjct:  235 GHFQKRQDRPDSENWTNCYVKNIPQTWDDVTLRKEFEPFGAISSCVVMKD-------------------ASSEQNRGFGFVNFEEPEAAREACEKLNN-KVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRD-------------PA---GNSRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRGMP--MQQPPMYGAAPMFYAQPNQMPPQ 486          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8050.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD5_ECTSI1.150e-10262.24Polyadenylate-binding protein n=2 Tax=Ectocarpus T... [more]
A0A835YVH9_9STRA1.790e-9661.30Polyadenylate-binding protein n=1 Tax=Tribonema mi... [more]
A0A7S2V0G2_9STRA5.100e-8756.40Polyadenylate-binding protein n=2 Tax=Fibrocapsa j... [more]
F0YJH2_AURAN2.320e-7350.66Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A067BXY4_SAPPC1.820e-7252.07Polyadenylate-binding protein n=4 Tax=Saprolegniac... [more]
A0A2D4BDJ5_PYTIN4.060e-7251.43Polyadenylate-binding protein n=2 Tax=Pythium TaxI... [more]
A0A1E7FQC9_9STRA2.100e-7150.85Polyadenylate-binding protein n=1 Tax=Fragilariops... [more]
A0A7S3LEE9_9STRA2.610e-7148.73Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
K3X8Z0_GLOUD1.250e-7050.52Polyadenylate-binding protein n=2 Tax=Pythiaceae T... [more]
A0A6G0WN78_9STRA2.890e-7051.38Polyadenylate-binding protein n=2 Tax=Aphanomyces ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 144..232
e-value: 2.6E-21
score: 86.8
coord: 17..109
e-value: 1.6E-12
score: 57.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 73..102
e-value: 1.2E-5
score: 25.0
coord: 145..180
e-value: 4.7E-9
score: 36.0
coord: 18..47
e-value: 1.6E-5
score: 24.7
coord: 196..229
e-value: 2.0E-7
score: 30.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 143..236
score: 19.194885
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 16..114
score: 16.466022
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 4..107
e-value: 4.0E-19
score: 70.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 110..272
e-value: 5.7E-29
score: 103.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..414
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 8..47
coord: 72..300
NoneNo IPR availablePANTHERPTHR24012:SF466POLYADENYLATE-BINDING PROTEIN 1-LIKEcoord: 8..47
coord: 72..300
NoneNo IPR availableCDDcd12381RRM4_I_PABPscoord: 142..236
e-value: 2.67738E-47
score: 154.7
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 15..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8050contigP-wetherbeei_contig8050:190..2909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8050.1.1mRNA_P-wetherbeei_contig8050.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8050 190..2909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8050.1.1 ID=prot_P-wetherbeei_contig8050.1.1|Name=mRNA_P-wetherbeei_contig8050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=414bp
GHFVRRNERAGQADWTNVYVKNLPAEWSEEKLREEFAKFGAITSCKLQLS
PPPGEPPEAAATEGEGTAKAASSKAKGFGFVNFEEHEGAVKAVEHFNGLK
LGEGEDMTELFASRAQKKVERQRELTQKYELLKVERMNRYQGVNLYVKNL
DEEVTEDALREAFAPYGTITSARVMKDSSGGAAAAGGVAAPAALPGQSKG
FGFVCFSAPEEATKAVQEMNNKMLANKPIYVALAQRKEVRRAQLEAQYSQ
RTSGMAPRGLPGMPQGPGMYGAMPYMMAAGPGMPGQRGGMTAQPPYPMMP
QQMMAGPRGAMAARGPMPGAYGGRGTYPMPAYAAMAPVPGMGAAAPRRGG
GNPGGAGSGVGGAGGVPAGGPGGVPGQPGGPRQRQGQPGGPQGQPVVPTA
RQQQQAAQQQQQAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf