prot_P-wetherbeei_contig8013.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig8013.1.1
Unique Name	prot_P-wetherbeei_contig8013.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	195

Homology

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BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Match: A0A836C7Y7_9STRA (RNA recognition motif 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Y7_9STRA)

HSP 1 Score: 262 bits (670), Expect = 5.800e-87
Identity = 125/155 (80.65%), Postives = 139/155 (89.68%), Query Frame = 0

Query:   15 GGSACDEFGLDVKKIAKGADKRTTIMIRNIPNKYTQAMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREFNGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLFCSNGTERGRPEPFPCATKARR 169
            GG +  EF LD+ KIAKG DKRTTIMIRNIPNKYTQAMLL+EI+ N+ EA+DFFYLPIDFKN+CNVGYAFINF+DFRRI+ F REF+GQRW+NFNSEKVCAI+YARIQGKASMI RFQNSSLMEKDGEYRPLLF S+G +RGRPEPFP  TK RR
Sbjct:    2 GGPSEAEFALDIGKIAKGLDKRTTIMIRNIPNKYTQAMLLQEINVNFLEAFDFFYLPIDFKNRCNVGYAFINFIDFRRIIAFTREFHGQRWRNFNSEKVCAISYARIQGKASMICRFQNSSLMEKDGEYRPLLFYSSGPDRGRPEPFPLGTKQRR 156

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BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Match: D7FMB4_ECTSI (RRM_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMB4_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 6.520e-87
Identity = 143/190 (75.26%), Postives = 157/190 (82.63%), Query Frame = 0

Query:    6 SCGPAVGGGGGSACDEFGLDVKKIAKGADKRTTIMIRNIPNKYTQAMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREFNGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLFCSNGTERGRPEPFPCATKARRSFNICGGAGPGGGGGPTGAGVIGPRE 195
            S GP   G GG    EF LD+KK++KG DKRTTIM+RNIPNKYTQ MLL+EID++YR AYDFFYLPIDFKNKCNVGYAFINFMD+RRIVPFFREFN QRWKNFNSEKVCAI+YARIQGKASMISRFQNSSLMEKDGEYRPL+F S G ERGRPEPFP ++KA R+        PGGGGG    GV G R+
Sbjct:  606 SAGPECSGNGGH---EFSLDLKKVSKGMDKRTTIMVRNIPNKYTQMMLLQEIDSSYRGAYDFFYLPIDFKNKCNVGYAFINFMDYRRIVPFFREFNAQRWKNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLIFHSTGPERGRPEPFPASSKAYRAVLA-----PGGGGG----GVFGVRD 783

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BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Match: A0A7S2V2F9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2F9_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.090e-76
Identity = 107/157 (68.15%), Postives = 135/157 (85.99%), Query Frame = 0

Query:   17 SACDEFGLDVKKIAKGADKRTTIMIRNIPNKYTQAMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREFNGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLFCSNGTERGRPEPFPCATKARRSFNI 173
            S  ++F LDVK++   +D+RTT+M+RNIPNKYTQ MLL+EI+ N++E YDFFYLPIDFKNKCNVGYAFINF+    IV F+ EFNG++WKNFNSEKVC I+YARIQGK+SMISRFQNSSLM+KDGE++PLLF S+G+ +G+PE FP A K +RSF++
Sbjct:   16 SNTEDFKLDVKRVLARSDQRTTVMVRNIPNKYTQQMLLQEINVNHKETYDFFYLPIDFKNKCNVGYAFINFISPLSIVEFYEEFNGRKWKNFNSEKVCCISYARIQGKSSMISRFQNSSLMDKDGEFQPLLFHSSGSNKGKPEKFPIAGKTKRSFSV 172

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BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Match: A0A836CK27_9STRA (RNA recognition motif 2-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK27_9STRA)

HSP 1 Score: 233 bits (594), Expect = 3.640e-76
Identity = 111/125 (88.80%), Postives = 119/125 (95.20%), Query Frame = 0

Query:   24 LDVKKIAKGADKRTTIMIRNIPNKYTQAMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREFNGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLF 148
            LD KKIAKG D+RTTIMIRNIPNKYTQAMLL+EIDAN+R  YDFFYLPIDFKN+CNVGYAFINF+DFRRIV F REF+GQRW+NFNSEKVCAI+YARIQGKASMISRFQNSSLMEKDGEYRPLLF
Sbjct:    1 LDTKKIAKGQDRRTTIMIRNIPNKYTQAMLLQEIDANFRGGYDFFYLPIDFKNRCNVGYAFINFIDFRRIVSFTREFHGQRWRNFNSEKVCAISYARIQGKASMISRFQNSSLMEKDGEYRPLLF 125

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BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Match: A0A7S2SS48_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS48_9STRA)

HSP 1 Score: 238 bits (606), Expect = 4.510e-70
Identity = 108/145 (74.48%), Postives = 129/145 (88.97%), Query Frame = 0

Query:   21 EFGLDVKKIAKGADKRTTIMIRNIPNKYTQAMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREFNGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLFCSNGTERGRPEPFPCAT 165
            EF L++ ++ +G+D+RTT+M+RNIPNKYTQA +L EI+ N++  YDFFYLPIDFKNKCNVGYAF+NF+DFR IV FF +FNG+RW NFNSEKVCAITYARIQGK SMISRFQNSSLMEKDGEYRPLLF S+G E+GRPEPFP ++
Sbjct:  727 EFSLNIDRVMQGSDRRTTLMVRNIPNKYTQAAVLEEINENFQGLYDFFYLPIDFKNKCNVGYAFMNFIDFRSIVSFFCKFNGRRWNNFNSEKVCAITYARIQGKTSMISRFQNSSLMEKDGEYRPLLFHSSGPEKGRPEPFPTSS 871

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BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Match: A0A7S2BIN8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BIN8_9STRA)

HSP 1 Score: 227 bits (578), Expect = 7.870e-70
Identity = 104/146 (71.23%), Postives = 124/146 (84.93%), Query Frame = 0

Query:   21 EFGLDVKKIAKGADKRTTIMIRNIPNKYTQAMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREFNGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLFCSNGTERGRPEPFPCATK 166
            EFGL++  I +G D+RTT+MIRNIPNKYTQ  +L EI+ +++  YDFFYLPIDFKNKCNVGYAFINF++FR IVPF  +++G+RW NFNSEKVCAITYARIQGKASMISRFQNSSLM+K GE+RPLLF S G  RG PEPFP  ++
Sbjct:  257 EFGLNIDHIMQGVDRRTTVMIRNIPNKYTQMAVLEEINQHFKGTYDFFYLPIDFKNKCNVGYAFINFIEFRAIVPFVCKYHGRRWNNFNSEKVCAITYARIQGKASMISRFQNSSLMDKSGEFRPLLFQSTGVNRGLPEPFPACSQ 402

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BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Match: A0A4D9D2V8_9STRA (RRM domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2V8_9STRA)

HSP 1 Score: 238 bits (606), Expect = 4.350e-69
Identity = 109/146 (74.66%), Postives = 129/146 (88.36%), Query Frame = 0

Query:   21 EFGLDVKKIAKGADKRTTIMIRNIPNKYTQAMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREFNGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLFCSNGTERGRPEPFPCATK 166
            EF LDV++I  G D+RTTIM+RN+PNKY+Q +LL EI+A ++  YDFFYLPIDFKNKCNVGYAFINF++ + IVPFF+EFNGQRW+NFNSEKVCAI+YARIQGK SMISRF NSSLMEKDGEYRPLLF S+G +RG+PEPFP + K
Sbjct: 1106 EFHLDVERILMGMDRRTTIMVRNVPNKYSQQLLLNEINATHKGKYDFFYLPIDFKNKCNVGYAFINFIEPKAIVPFFKEFNGQRWRNFNSEKVCAISYARIQGKQSMISRFSNSSLMEKDGEYRPLLFYSSGPDRGKPEPFPSSLK 1251

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BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Match: A0A482RU13_9ARCH (RRM domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU13_9ARCH)

HSP 1 Score: 211 bits (538), Expect = 6.080e-67
Identity = 92/151 (60.93%), Postives = 124/151 (82.12%), Query Frame = 0

Query:   16 GSACDEFGLDVKKIAKGADKRTTIMIRNIPNKYTQAMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREFNGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLFCSNGTERGRPEPFPCATK 166
            G    +F LD++++  G++ RTT+M+RNIPNKY+Q MLL E++A ++  YDFFYLPIDFKN+CNVGYAFINF+    IV F R F GQRW++FNSEK+C++TYARIQGKA+++SRFQNSSL++KD  Y+PLLF S+G ++G+PEPFP  +K
Sbjct:   24 GEGVGDFALDLQRLQDGSETRTTLMVRNIPNKYSQQMLLEEVNAQHQGQYDFFYLPIDFKNRCNVGYAFINFLSPLHIVDFVRRFEGQRWRSFNSEKICSVTYARIQGKAALVSRFQNSSLLDKDDTYKPLLFRSSGPDQGQPEPFPAPSK 174

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BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Match: A0A3R7KLF4_9STRA (RRM_2 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KLF4_9STRA)

HSP 1 Score: 214 bits (544), Expect = 6.870e-65
Identity = 98/142 (69.01%), Postives = 118/142 (83.10%), Query Frame = 0

Query:   21 EFGLDVKKIAKGADKRTTIMIRNIPNKYTQAMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREFNGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLFCSNGTERGRPEPFP 162
            EF L ++++A G D RTT+MIRNIPNKYTQ MLL EI+ N+R  YDFFYLPIDFKNKCN+GYAFINF++   I  F REF+GQ+W NFNSEKVCAI+YAR+QGK +MI+RFQNSSL+EK   YRPL+F S+G  RG+PEPFP
Sbjct:  230 EFSLSIERVASGEDMRTTLMIRNIPNKYTQQMLLAEINRNHRGNYDFFYLPIDFKNKCNMGYAFINFIEAAHIEAFHREFDGQKWTNFNSEKVCAISYARLQGKQAMIARFQNSSLLEKHESYRPLVFGSSGPNRGKPEPFP 371

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BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Match: A0A7S3Y2P3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2P3_HETAK)

HSP 1 Score: 206 bits (523), Expect = 1.320e-64
Identity = 95/142 (66.90%), Postives = 114/142 (80.28%), Query Frame = 0

Query:   21 EFGLDVKKIAKGADKRTTIMIRNIPNKYTQAMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREFNGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLFCSNGTERGRPEPFP 162
            E+ L++++I  GAD RTT+M+RNIPNKYTQ MLL EI+A +   YDFFYLPIDFKN+CNVGYAF+NF+  R I  F R F+GQRW  FNSEKVCAI YAR+QG+ +MI+RFQNSSL+ K+G YRPLLF S G   GRPEPFP
Sbjct:   26 EYSLNMQQILDGADLRTTVMVRNIPNKYTQQMLLDEINAEFEGTYDFFYLPIDFKNRCNVGYAFVNFLSARTIPAFHRRFDGQRWGTFNSEKVCAIAYARLQGRRAMIARFQNSSLLAKEGRYRPLLFHSAGPLAGRPEPFP 167

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig8013.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836C7Y7_9STRA	5.800e-87	80.65	RNA recognition motif 2-domain-containing protein ...	[more]
D7FMB4_ECTSI	6.520e-87	75.26	RRM_2 domain-containing protein n=2 Tax=Ectocarpus...	[more]
A0A7S2V2F9_9STRA	1.090e-76	68.15	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A836CK27_9STRA	3.640e-76	88.80	RNA recognition motif 2-domain-containing protein ...	[more]
A0A7S2SS48_9STRA	4.510e-70	74.48	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2BIN8_9STRA	7.870e-70	71.23	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A4D9D2V8_9STRA	4.350e-69	74.66	RRM domain-containing protein n=2 Tax=Monodopsidac...	[more]
A0A482RU13_9ARCH	6.080e-67	60.93	RRM domain-containing protein (Fragment) n=1 Tax=a...	[more]
A0A3R7KLF4_9STRA	6.870e-65	69.01	RRM_2 domain-containing protein n=3 Tax=Phytophtho...	[more]
A0A7S3Y2P3_HETAK	1.320e-64	66.90	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007201	Mei2-like, C-terminal RNA recognition motif	PFAM	PF04059	RRM_2	coord: 36..132 e-value: 2.6E-45 score: 152.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 30..123 e-value: 4.8E-6 score: 28.8
None	No IPR available	PANTHER	PTHR23189:SF98	PROTEIN MEI2-LIKE 4	coord: 21..168
None	No IPR available	PANTHER	PTHR23189	RNA RECOGNITION MOTIF-CONTAINING	coord: 21..168
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..19 score: 6.0
IPR034454	MEI2-like, RNA recognition motif 3	CDD	cd12531	RRM3_MEI2_like	coord: 39..124 e-value: 3.47605E-56 score: 170.654
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 38..122

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig8013	contig	P-wetherbeei_contig8013:448..1583 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig8013.1.1	mRNA_P-wetherbeei_contig8013.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig8013 448..1583 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig8013.1.1 ID=prot_P-wetherbeei_contig8013.1.1|Name=mRNA_P-wetherbeei_contig8013.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=195bp
MVRRESCGPAVGGGGGSACDEFGLDVKKIAKGADKRTTIMIRNIPNKYTQ
AMLLREIDANYREAYDFFYLPIDFKNKCNVGYAFINFMDFRRIVPFFREF
NGQRWKNFNSEKVCAITYARIQGKASMISRFQNSSLMEKDGEYRPLLFCS
NGTERGRPEPFPCATKARRSFNICGGAGPGGGGGPTGAGVIGPRE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007201	Mei2-like_Rrm_C
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR034454	MEI2-like_RRM3
IPR035979	RBD_domain_sf