prot_P-wetherbeei_contig7996.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7996.1.1
Unique Nameprot_P-wetherbeei_contig7996.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length197
Homology
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Match: A0A353LSU2_9PROT (Phosphomethylpyrimidine synthase n=9 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LSU2_9PROT)

HSP 1 Score: 379 bits (974), Expect = 4.870e-127
Identity = 178/196 (90.82%), Postives = 190/196 (96.94%), Query Frame = 0
Query:    1 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDALSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAASGMAEKSEEFRNAGGRIYQDIAKSEEKQSNGAL 196
            MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP+RDDVKVGV+TYKIAAHAADLAKGHP+AQARDDALSRARFEFRWEDQFNLSLDP+ ARE+HDQTLPK+AHKVAHFCSMCGPKFCSMKITQEVRD+AASGMAEKS EFRN+GG+IYQ+IA+ E K+SN  L
Sbjct:  416 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNRDDVKVGVVTYKIAAHAADLAKGHPAAQARDDALSRARFEFRWEDQFNLSLDPDCAREYHDQTLPKEAHKVAHFCSMCGPKFCSMKITQEVRDFAASGMAEKSAEFRNSGGKIYQEIAQREVKESNDKL 611          
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Match: A0A2N3E1E8_9PROT (Phosphomethylpyrimidine synthase (Fragment) n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E1E8_9PROT)

HSP 1 Score: 357 bits (916), Expect = 5.460e-123
Identity = 168/196 (85.71%), Postives = 180/196 (91.84%), Query Frame = 0
Query:    1 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDALSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAASGMAEKSEEFRNAGGRIYQDIAKSEEKQSNGAL 196
            MHKIKVNMDKQL+ CG APFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDR DVK GVITYKIAAHAADLAKGHP+AQ RDDALSRARFEFRWEDQFNL+LDPERA+EFHD+TLPK+AHKVAHFCSMCGPKFCSMKITQEVRDYA SGMAE + EFRN+GG IY + A +  K +N +L
Sbjct:   70 MHKIKVNMDKQLKHCGGAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRADVKEGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWEDQFNLALDPERAKEFHDRTLPKEAHKVAHFCSMCGPKFCSMKITQEVRDYAESGMAEMASEFRNSGGEIYLEEADAANKAANKSL 265          
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Match: A0A2D4VL66_9HYPH (Phosphomethylpyrimidine synthase n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VL66_9HYPH)

HSP 1 Score: 361 bits (927), Expect = 7.200e-120
Identity = 170/196 (86.73%), Postives = 181/196 (92.35%), Query Frame = 0
Query:    1 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDALSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAASGMAEKSEEFRNAGGRIYQDIAKSEEKQSNGAL 196
            MHKIKVNMDKQL+ CG APFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDR DVK GVITYKIAAHAADLAKGHP+AQ RDDALSRARFEFRWEDQFN++LDPERA+EFHDQTLPK+AHKVAHFCSMCGPKFCSMKITQEVRDYA SGMAEK+ EFRN+GG IY + A +  K +N AL
Sbjct:  420 MHKIKVNMDKQLKHCGGAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRQDVKEGVITYKIAAHAADLAKGHPAAQIRDDALSRARFEFRWEDQFNIALDPERAKEFHDQTLPKEAHKVAHFCSMCGPKFCSMKITQEVRDYAESGMAEKAGEFRNSGGEIYLEEADAANKAANKAL 615          
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Match: A0A2Z4ULH9_9HYPH (Phosphomethylpyrimidine synthase n=4 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4ULH9_9HYPH)

HSP 1 Score: 358 bits (918), Expect = 1.820e-118
Identity = 169/197 (85.79%), Postives = 182/197 (92.39%), Query Frame = 0
Query:    1 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDALSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAASGMAEKSEEFRNAGGRIYQDIAKSEE-KQSNGAL 196
            MHKIKVNMDKQL+ECG APFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDR+DVK GVITYKIAAHAADLAKGHP+AQ RDDALSRARFEFRWEDQFNL+LDPERA++FHDQTLPKDAHK AHFCSMCGPKFCSMKITQEVRDYA SGMAE S++F N+GG++Y +    E  K+SN AL
Sbjct:  421 MHKIKVNMDKQLKECGGAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRNDVKEGVITYKIAAHAADLAKGHPAAQMRDDALSRARFEFRWEDQFNLALDPERAKDFHDQTLPKDAHKTAHFCSMCGPKFCSMKITQEVRDYAESGMAEMSDQFNNSGGKLYMEEGDVEALKRSNKAL 617          
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Match: A0A258BQN9_9PROT (Phosphomethylpyrimidine synthase (Fragment) n=1 Tax=Hyphomonas sp. 32-62-5 TaxID=1970391 RepID=A0A258BQN9_9PROT)

HSP 1 Score: 344 bits (882), Expect = 2.180e-118
Identity = 169/209 (80.86%), Postives = 180/209 (86.12%), Query Frame = 0
Query:    1 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDALSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAA------------------SGMAEKSEEFRNAGGRIYQDIAKSEEKQ 191
            MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFG AMLCYVTPKEHLGLPDRDDVKVGVITYK+AAHAADLAKGHP+A  RDDALSRARFEFRWEDQFNLSLDPE AR+FHDQTLPKDAHKVAHFCSMCGPKFCSMKIT EVR+YAA                  +GMAEKS+EF + GG IY  +++S EK+
Sbjct:   23 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPDRDDVKVGVITYKLAAHAADLAKGHPTAHLRDDALSRARFEFRWEDQFNLSLDPETARDFHDQTLPKDAHKVAHFCSMCGPKFCSMKITAEVREYAAGMSDNERADLEKQAAAARAGMAEKSKEFMDKGGEIY--LSESGEKR 229          
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Match: A0A6N6VKJ7_9HYPH (Phosphomethylpyrimidine synthase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VKJ7_9HYPH)

HSP 1 Score: 357 bits (917), Expect = 2.580e-118
Identity = 169/196 (86.22%), Postives = 180/196 (91.84%), Query Frame = 0
Query:    1 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDALSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAASGMAEKSEEFRNAGGRIYQDIAKSEEKQSNGAL 196
            MHKIKVNMDKQL+ CG APFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP+R DVK GVITYKIAAHAADLAKGHP+AQ RDDALSRARFEFRWEDQFNLSLDPERA+EFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYA SGMAE S++FRN+G  IY +   +  K++N AL
Sbjct:  417 MHKIKVNMDKQLKHCGGAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNRADVKEGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWEDQFNLSLDPERAKEFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAESGMAEMSDKFRNSGAEIYLEEESAAVKEANKAL 612          
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Match: THIC_PARL1 (Phosphomethylpyrimidine synthase n=9 Tax=Alphaproteobacteria TaxID=28211 RepID=THIC_PARL1)

HSP 1 Score: 357 bits (917), Expect = 2.650e-118
Identity = 169/196 (86.22%), Postives = 180/196 (91.84%), Query Frame = 0
Query:    1 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDALSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAASGMAEKSEEFRNAGGRIYQDIAKSEEKQSNGAL 196
            MHKIKVNMDKQL+ CG APFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDR DVK GVITYKIAAHAADLAKGHP+AQ RDDALSRARFEFRWEDQFNL+LDPERA+EFHD+TLPK+AHKVAHFCSMCGPKFCSMKITQEVRDYA SGMA+ + EFRN+GG IY + A +  K SN AL
Sbjct:  422 MHKIKVNMDKQLKHCGGAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRADVKEGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWEDQFNLALDPERAKEFHDRTLPKEAHKVAHFCSMCGPKFCSMKITQEVRDYAESGMADMASEFRNSGGEIYLEEADAAVKASNRAL 617          
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Match: A0A2A5EJU8_9HYPH (Phosphomethylpyrimidine synthase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EJU8_9HYPH)

HSP 1 Score: 356 bits (913), Expect = 8.720e-118
Identity = 168/197 (85.28%), Postives = 182/197 (92.39%), Query Frame = 0
Query:    1 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDALSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAASGMAEKSEEFRNAGGRIYQDIAKSEE-KQSNGAL 196
            MHKIKVNMDKQL+ECG APFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVK GVITYKIAAHAADLAKGHP+AQ RDDALSRARFEFRWEDQFNL+LDPERAR+FHDQT+PK+AHKVAHFCSMCGPKFCSMKITQEVR+YA SGM E S+ F N+G ++Y D  + +E K+SN AL
Sbjct:  417 MHKIKVNMDKQLKECGGAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKEGVITYKIAAHAADLAKGHPAAQTRDDALSRARFEFRWEDQFNLALDPERARDFHDQTMPKEAHKVAHFCSMCGPKFCSMKITQEVREYAESGMVEMSDAFNNSGAKLYVDEDEVDELKRSNKAL 613          
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Match: A0A081BEH5_9HYPH (Phosphomethylpyrimidine synthase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BEH5_9HYPH)

HSP 1 Score: 355 bits (911), Expect = 1.650e-117
Identity = 170/199 (85.43%), Postives = 183/199 (91.96%), Query Frame = 0
Query:    1 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDALSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAASGMAEKSEEFRNAGGRIYQ---DIAKSEEKQSNGAL 196
            MHKIKVNMDKQL+ECG APFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP+RDDVK GVITYKIAAHAADLAKGHP+AQ RDDALSRARFEFRWEDQFNL+LDPERA+EFHDQTLPK+AHKVAHFCSMCGPKFCSMKITQEVR+YA SGMAE + EFRN+G ++Y    D+A    K+SN AL
Sbjct:  417 MHKIKVNMDKQLKECGGAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNRDDVKEGVITYKIAAHAADLAKGHPAAQMRDDALSRARFEFRWEDQFNLALDPERAKEFHDQTLPKEAHKVAHFCSMCGPKFCSMKITQEVREYAESGMAEMASEFRNSGSKLYMEEGDVAAL--KRSNKAL 613          
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Match: A0A2E1CWG6_9PROT (Phosphomethylpyrimidine synthase n=1 Tax=Kordiimonas sp. TaxID=1970157 RepID=A0A2E1CWG6_9PROT)

HSP 1 Score: 355 bits (911), Expect = 1.900e-117
Identity = 164/193 (84.97%), Postives = 179/193 (92.75%), Query Frame = 0
Query:    1 MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDALSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFCSMKITQEVRDYAASGMAEKSEEFRNAGGRIYQDIAKSEEKQSN 193
            MHKIKVNMDKQL+EC EAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVK GVITYK+AAHAADLAKGHP AQ RDDALSRARFEFRWEDQFNLSLDPERAR+FHDQT+PK+AHKVAHFCSMCGPKFCSMKITQEVRD+A +GMAE SE+F+  G +IYQ +  +E+  ++
Sbjct:  420 MHKIKVNMDKQLKECHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKEGVITYKLAAHAADLAKGHPGAQLRDDALSRARFEFRWEDQFNLSLDPERARDFHDQTMPKEAHKVAHFCSMCGPKFCSMKITQEVRDFAHNGMAEMSEKFKETGAKIYQTVEANEDANAS 612          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7996.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LSU2_9PROT4.870e-12790.82Phosphomethylpyrimidine synthase n=9 Tax=Alphaprot... [more]
A0A2N3E1E8_9PROT5.460e-12385.71Phosphomethylpyrimidine synthase (Fragment) n=1 Ta... [more]
A0A2D4VL66_9HYPH7.200e-12086.73Phosphomethylpyrimidine synthase n=2 Tax=Parvibacu... [more]
A0A2Z4ULH9_9HYPH1.820e-11885.79Phosphomethylpyrimidine synthase n=4 Tax=Rhodobiac... [more]
A0A258BQN9_9PROT2.180e-11880.86Phosphomethylpyrimidine synthase (Fragment) n=1 Ta... [more]
A0A6N6VKJ7_9HYPH2.580e-11886.22Phosphomethylpyrimidine synthase n=1 Tax=Parvibacu... [more]
THIC_PARL12.650e-11886.22Phosphomethylpyrimidine synthase n=9 Tax=Alphaprot... [more]
A0A2A5EJU8_9HYPH8.720e-11885.28Phosphomethylpyrimidine synthase n=1 Tax=Rhodobiac... [more]
A0A081BEH5_9HYPH1.650e-11785.43Phosphomethylpyrimidine synthase n=1 Tax=Tepidicau... [more]
A0A2E1CWG6_9PROT1.900e-11784.97Phosphomethylpyrimidine synthase n=1 Tax=Kordiimon... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.250.620coord: 95..127
e-value: 1.8E-20
score: 74.4
NoneNo IPR availablePANTHERPTHR30557:SF1PHOSPHOMETHYLPYRIMIDINE SYNTHASE, CHLOROPLASTICcoord: 1..183
IPR038521ThiC/Bza, core domainGENE3D3.20.20.540Radical SAM ThiC family, central domaincoord: 1..94
e-value: 6.1E-48
score: 165.2
IPR002817Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/BPFAMPF01964ThiC_Rad_SAMcoord: 1..157
e-value: 1.5E-72
score: 244.7
IPR002817Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/BPANTHERPTHR30557THIAMINE BIOSYNTHESIS PROTEIN THICcoord: 1..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7996contigP-wetherbeei_contig7996:16..606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7996.1.1mRNA_P-wetherbeei_contig7996.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7996 1..606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7996.1.1 ID=prot_P-wetherbeei_contig7996.1.1|Name=mRNA_P-wetherbeei_contig7996.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp
MHKIKVNMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFG
CAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPSAQARDDA
LSRARFEFRWEDQFNLSLDPERAREFHDQTLPKDAHKVAHFCSMCGPKFC
SMKITQEVRDYAASGMAEKSEEFRNAGGRIYQDIAKSEEKQSNGAL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038521ThiC/Bza_core_dom
IPR002817ThiC/BzaA/B