prot_P-wetherbeei_contig790.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig790.1.1
Unique Nameprot_P-wetherbeei_contig790.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length1377
Homology
BLAST of mRNA_P-wetherbeei_contig790.1.1 vs. uniprot
Match: A0A835ZIY3_9STRA (NRDE-2, necessary for RNA interference-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIY3_9STRA)

HSP 1 Score: 184 bits (466), Expect = 5.310e-43
Identity = 181/435 (41.61%), Postives = 228/435 (52.41%), Query Frame = 0
Query:  959 RRYVADAEGLSNFDTVTGTAYSVHHGYRIRLEEEDADSRGSA------YHRILSKLAPAAATEXXXXXXXXXXXXXXXXXXXXXPWAEKFQRRRAARELAEKAVLTVVAPDDALAAWSTAEDTLGRERWAPIRAVSAPEAADLNPDRVVFWDDVREFVPAVVCPAA----RRLAVAQLLTLAGIALPRSAPSHCPAARASAQLCDSLGLGGPVDVLVGGLRLKGLLNG----ICGG--ALAARPPPVAAATTGAVADIAAGDPFEGPLWA-LRAVDQCVLLSEEFLADSSRQRFARNILHTLLADVSGVAGPAGAGADTDRSGDGTMMTGAADRELRVQLQCVLMHMEGHIAATAAATSKGHNGRRETPALDAAAAAAAAEGVRSVAKSVLQASEQSATDLRLWSAYVHVETVQGCRAEALRVARKALSMAAALP 1376
            RRY  DAEGL + +    TAYS+ HGYRI L +  A   G+       Y RIL+ +    A+ XXXXXXXXXXXXXXXXXXXXX     F+ RRA     E   L  VA DDA AAW+  E+ L   +WAP+RA +AP AA+  PDRVVFW+D+     A+  P A    R   +A+ L  AG+  PR+APSH  AA A A  C++L    P  +L GGL L    +G    + GG  A AA PP +                   PL A L A  Q V +    + D++RQ F RN L++L++    +                       D +LRV LQC  + +EG  A   A  S G +     P+   A  AAAAE VR  A+S+LQASE SATDLRLW AYV +E   G  A ALR AR+AL+   ALP
Sbjct:  880 RRY--DAEGLISVNEKDQTAYSLEHGYRISLRDAAAAGAGAPAQTTREYRRILAHMR-GDASGXXXXXXXXXXXXXXXXXXXXXXXXXXFRDRRAEELAREAQALVPVADDDAFAAWAQREERLAAAQWAPLRAAAAPAAAEAAPDRVVFWEDIAPLAFALRAPPASAPARAALLARFLAAAGVHCPRAAPSHAAAALALAARCEALS-DYPACLLAGGLGLAEACSGWDASVIGGTAAAAAAPPSL-------------------PLQAVLAAQQQLVWVEPRLVHDAARQTFVRNALYSLVSPSLSL-----------------------DPDLRVDLQCCTLLLEG--ALLRARRSGGGSVGAAAPS---AGDAAAAEAVRGAARSLLQASEASATDLRLWCAYVELEDALGAPATALRAARRALASVEALP 1263          
BLAST of mRNA_P-wetherbeei_contig790.1.1 vs. uniprot
Match: A0A6H5JC63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC63_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 7.850e-36
Identity = 143/425 (33.65%), Postives = 199/425 (46.82%), Query Frame = 0
Query:  964 DAEGLSNFDTVTGTAYSVHHGYRIRLEEEDADSRGSAYHRILSKLAPAAATEXXXXXXXXXXXXXXXXXXXXXPWAEKFQRRRAARE-----LAEKAVLTVVAPDDALAAWSTAEDTLGRERWAPIRAVSAPEAADLNPDRVVFWDDVREFVPAVVCPAARRLAVAQLLTLAGIALPRSAPSHCPAARASAQLCDSLGLGGPVDVLVGGLRLKGLLNGICGGALAARPPPVAAATTGAVADIAAGDPFEGPLWALRAVDQCVLLSEEFLADSSRQRFARNILHTLLADVSGVAGPAGAGADTDRSGDGTMMTGAADRELRVQLQCVLMHMEGHIAATAAAT----SKGHNGRRETPALDAAAAA---AAAEGVRSVAKSVLQASEQSATDLRLWSAYVHVETVQGCRAEALRVARKALSMAAALP 1376
            +AEGL   D    TAYSV HGYRI ++       G  Y RILS++   +A +                       A K  + R ARE       + AVL  V   D  + W+ AED + + +W P+R++   E A+  PDRVVF +D+R F+  +   A++   V  LL+  G+  PRS  SH P   + A    S G GG     + G  +  + NG+      A    +  + TG V           P     A DQ +LL+++ +AD SRQ F RN+LH L      V  PA   + T  S             + VQLQC L+  EG++A+ A A     S G   ++  P    A  +         R VAKS+L+AS+ SATDLRLWS+YV +  + G   EA++VA KALSM  ALP
Sbjct:  710 EAEGLIWLDDEQRTAYSVRHGYRIDVQGAQDSVSGHEYGRILSQMRGGSALDEDGDRNVEVAAA-----------ASKRLQYRGARERDAEVAKQSAVLQDVPEGDVFSEWAKAEDEMTQRQWQPLRSIQDAERAEEQPDRVVFVEDLRPFLFRLSHAASKSTLVGLLLSAGGLVHPRSDVSHSPKLMSEACCAGSFGDGG-----LSGSLISSVSNGLQA-VWRASEGDLPVSGTGVVRCTGRPGSCLPPAVVSTAADQFLLLTDDVVADCSRQAFLRNVLHHL------VRAPASLPSTTSGS------------NILVQLQCTLIMFEGYLASAAGARHGRFSAGSAPKQTRPTGQGAPWSDEDTHGHEARKVAKSLLEASQASATDLRLWSSYVQLLALLGSTQEAIKVAEKALSMVQALP 1099          
BLAST of mRNA_P-wetherbeei_contig790.1.1 vs. uniprot
Match: D7FJJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ5_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 1.690e-35
Identity = 143/425 (33.65%), Postives = 199/425 (46.82%), Query Frame = 0
Query:  964 DAEGLSNFDTVTGTAYSVHHGYRIRLEEEDADSRGSAYHRILSKLAPAAATEXXXXXXXXXXXXXXXXXXXXXPWAEKFQRRRAARE-----LAEKAVLTVVAPDDALAAWSTAEDTLGRERWAPIRAVSAPEAADLNPDRVVFWDDVREFVPAVVCPAARRLAVAQLLTLAGIALPRSAPSHCPAARASAQLCDSLGLGGPVDVLVGGLRLKGLLNGICGGALAARPPPVAAATTGAVADIAAGDPFEGPLWALRAVDQCVLLSEEFLADSSRQRFARNILHTLLADVSGVAGPAGAGADTDRSGDGTMMTGAADRELRVQLQCVLMHMEGHIAATAAAT----SKGHNGRRETPALDAAAAA---AAAEGVRSVAKSVLQASEQSATDLRLWSAYVHVETVQGCRAEALRVARKALSMAAALP 1376
            +AEGL   D    TAYSV HGYRI ++       G  Y RILS++   +A                         A K  R R ARE       + AVL  V   D  + W+ AED + + +W P+R++   E A+  PDRVVF +D+R F+  +   A+    V  LL++ G+  PRS  SH P   + A    S G GG     + G  +  + NG+      A    +  + +G V           P     A DQ +LL+++ +AD SRQ F RN+LH L      V  PA   + T  S             + VQLQC L+  EG++A+ + A     S G   ++  P    AA +         R VAKS+L+AS+ SATDLRLWS+YV +  + G   EA++VA KALSM  ALP
Sbjct:  170 EAEGLIWLDDEQRTAYSVRHGYRIDVQGAQDSVSGHEYGRILSQMRGGSALGEDGDRNVEVAAA-----------ASKRLRYRGARERDAEMAKQAAVLQDVPEGDVFSEWAKAEDEMTQRQWQPLRSIQDAERAEEQPDRVVFIEDLRPFLFRLSHAASISTLVGLLLSVGGLVHPRSDVSHSPKLMSEACRAGSFGDGG-----LSGSLISSVNNGLQA-VWRASEGDLPVSGSGVVGCTGRPGSCLPPAVVSTAADQFLLLTDDVVADCSRQAFLRNVLHHL------VRAPASLPSTTSGS------------NILVQLQCTLIMFEGYLASASGARHGRFSAGSAPKQTRPTQQGAAWSDEDTHGHEARKVAKSLLEASQASATDLRLWSSYVQLLALLGSTQEAIKVAEKALSMVQALP 559          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig790.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZIY3_9STRA5.310e-4341.61NRDE-2, necessary for RNA interference-domain-cont... [more]
A0A6H5JC63_9PHAE7.850e-3633.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJJ5_ECTSI1.690e-3533.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 331..351
NoneNo IPR availableCOILSCoilCoilcoord: 50..77
NoneNo IPR availableCOILSCoilCoilcoord: 510..533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 817..834
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 877..891
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 800..816
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 725..739
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 785..843
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 670..743
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 868..891
IPR013633siRNA-mediated silencing protein NRDE-2PFAMPF08424NRDE-2coord: 341..677
e-value: 8.8E-30
score: 103.9
IPR013633siRNA-mediated silencing protein NRDE-2PANTHERPTHR13471TETRATRICOPEPTIDE-LIKE HELICALcoord: 35..726
coord: 1056..1375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig790contigP-wetherbeei_contig790:327..4457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig790.1.1mRNA_P-wetherbeei_contig790.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig790 327..4459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig790.1.1 ID=prot_P-wetherbeei_contig790.1.1|Name=mRNA_P-wetherbeei_contig790.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1377bp
SQALQYVLTSSRARSFSLSLSAAYKGEKDFLAIHASMHQLASEAEDDEAR
NERRREKKAHRRERKKEEKEKRSKKKHKRKRSDSDRKERKRSRRRGSPSR
QHAGAIVVTVQRSSGKEDRGGSSSETNLSESDDGDQNRCSSYAVLEQSAG
YAMVPLAAPPSLEPPLPFSTDRRGDKEALMCGAPYRLDVSTYHSTRRAGL
GRPRPHRRRYDDDGGGDESTRQGHKGRREAPQRYFEADARRAEDTMPLRC
WRLCRSEKRAARAAAALTRRTRDDEERADIAASPPPSFNFIPVDPVMVGG
EAGATTTVCQTGNDGSGDKEEDDGGGTGGAVESLEQSIVRRTKELNRATR
DSPHDVRKWLRFVDFQAEAVAMFRRRGRDARDHSIWGFRSGLATGGSAMA
AAVHDMQGRQLAVLGRALKANAGHLRLILERLSAARLCLASEEAEHMWCT
ALADAAAASKAAARNRTAAAIPAAAGPGGVAGRSTLWRYYVAHRRSLFAN
FSLTAARKVVADAAVAVEDAEAARRAAEEAEDRRKGVFVIRGAGSALSGG
RGGGSIGVGGDGGGGGSSNGSGAVAVTELALLQIQWEHLLLERSAGWEQR
AVAAAQATVEGAAASPALAVAAAGDDALVLRLVAAFWESEFARIGDAHPA
SAGMASWRTQEGAETTAALLAAPAPSLQRPPFSQDGARRRRLSRWETQPE
ASASWPRLPPPEEESSLPQEQQQPLLPWEQPPPPPLRPLLHAMVSEASGV
SGSSSSAVKRSASLVLWRRRASDFFFANEAEEPPSYYSAAPPLPLQQQPP
QQQPLRRQAQEPPQLSPQLASPTPPPPPPPVSSSELSEVRPMSQGVAALE
RAYQAAMRATEVAERLDALADATAEEDVAKAEDDEPSGLDELLEESPTDA
EMTGRRQDFMGEAVEMQASTAESAAATAAAAGAAAAAATAVTATAATEAW
AAGGVGGERRYVADAEGLSNFDTVTGTAYSVHHGYRIRLEEEDADSRGSA
YHRILSKLAPAAATEAAAAAVAGKPGAPIAPAAPRRPWAEKFQRRRAARE
LAEKAVLTVVAPDDALAAWSTAEDTLGRERWAPIRAVSAPEAADLNPDRV
VFWDDVREFVPAVVCPAARRLAVAQLLTLAGIALPRSAPSHCPAARASAQ
LCDSLGLGGPVDVLVGGLRLKGLLNGICGGALAARPPPVAAATTGAVADI
AAGDPFEGPLWALRAVDQCVLLSEEFLADSSRQRFARNILHTLLADVSGV
AGPAGAGADTDRSGDGTMMTGAADRELRVQLQCVLMHMEGHIAATAAATS
KGHNGRRETPALDAAAAAAAAEGVRSVAKSVLQASEQSATDLRLWSAYVH
VETVQGCRAEALRVARKALSMAAALPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013633NRDE-2