prot_P-wetherbeei_contig7892.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7892.2.1
Unique Nameprot_P-wetherbeei_contig7892.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length135
Homology
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Match: A0A1G8C0Q7_9RHOO (30S ribosomal protein S6 n=1 Tax=Propionivibrio dicarboxylicus TaxID=83767 RepID=A0A1G8C0Q7_9RHOO)

HSP 1 Score: 202 bits (515), Expect = 4.170e-65
Identity = 95/117 (81.20%), Postives = 105/117 (89.74%), Query Frame = 0
Query:    1 MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYPIAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPSPMMKEEKSKSLMGEQRG 117
            MRHYE+VFIVHPDQSEQVP MVERYKALV +RNG +HRLEDWGRRQ+ YPI K+HKAHYVLMNIECDGETLAELEH FKFNDA+LRHL +KM +A TTPSPMMKEEKSKS++  Q G
Sbjct:    1 MRHYEIVFIVHPDQSEQVPAMVERYKALVTSRNGQIHRLEDWGRRQLAYPIQKLHKAHYVLMNIECDGETLAELEHGFKFNDAILRHLTIKMKRAITTPSPMMKEEKSKSMLPTQEG 117          
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Match: A0A6L5JV00_RHOTE (30S ribosomal protein S6 n=4 Tax=Rhodocyclus TaxID=1064 RepID=A0A6L5JV00_RHOTE)

HSP 1 Score: 202 bits (514), Expect = 6.520e-65
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 0
Query:    1 MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYPIAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPSPMMKEEKSKSLM 112
            MRHYE+VFIVHPDQSEQVP MVERY+ALVA RNGV+HRLEDWGRRQ+ YPI K+HKAHYVLMNIECDGETLAELEHAFKFNDAVLRHL +K  KA TTPSPMMKEEK++SL+
Sbjct:    1 MRHYEIVFIVHPDQSEQVPAMVERYRALVATRNGVIHRLEDWGRRQLAYPIQKLHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLTIKTKKAVTTPSPMMKEEKARSLL 112          
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Match: A0A1J5RY63_9ZZZZ (30S ribosomal protein S6 n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5RY63_9ZZZZ)

HSP 1 Score: 202 bits (514), Expect = 6.520e-65
Identity = 97/111 (87.39%), Postives = 102/111 (91.89%), Query Frame = 0
Query:    1 MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYPIAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPSPMMKEEKSKSL 111
            MRHYE+VFIVHPDQSEQVP MVERYKALVA RNG +HRLEDWGRRQM YPI K+HKAHYVLMNIECDGETLAELEHAFKFNDAVLRHL VKM  A TTPSPMMKEEK++SL
Sbjct:    1 MRHYEIVFIVHPDQSEQVPAMVERYKALVATRNGAIHRLEDWGRRQMAYPIQKVHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLTVKMKHAVTTPSPMMKEEKARSL 111          
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Match: N6YX75_THAL4 (30S ribosomal protein S6 n=21 Tax=Betaproteobacteria TaxID=28216 RepID=N6YX75_THAL4)

HSP 1 Score: 201 bits (512), Expect = 1.190e-64
Identity = 96/111 (86.49%), Postives = 101/111 (90.99%), Query Frame = 0
Query:    1 MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYPIAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPSPMMKEEKSKSL 111
            MRHYE+VFIVHPDQSEQVP MVERYK LV  RNG +HRLEDWGRRQM YPI K+HKAHYVLMNIECDGETLAELEHAFKFNDAVLRHL +KM KA TTPSPMMKEEKS+SL
Sbjct:    1 MRHYEIVFIVHPDQSEQVPAMVERYKTLVTGRNGQIHRLEDWGRRQMAYPIQKVHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLTIKMKKAVTTPSPMMKEEKSRSL 111          
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Match: A0A5C7K649_9RHOO (30S ribosomal protein S6 n=2 Tax=Rhodocyclaceae TaxID=75787 RepID=A0A5C7K649_9RHOO)

HSP 1 Score: 200 bits (509), Expect = 3.210e-64
Identity = 95/112 (84.82%), Postives = 103/112 (91.96%), Query Frame = 0
Query:    1 MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYPIAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPSPMMKEEKSKSLM 112
            MRHYEV FIVHPDQSEQVP MVERYK+LV +RNG++HRLEDWGRRQ+ YP+ K+HKAHYVLMNIECDGETLAELEHAFKFNDAVLRHL VKM  A T+PSPMMKEEKSKSLM
Sbjct:    1 MRHYEVCFIVHPDQSEQVPAMVERYKSLVTSRNGIIHRLEDWGRRQLAYPLQKIHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLTVKMKAAITSPSPMMKEEKSKSLM 112          
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Match: A0A2T4IC86_9RHOO (30S ribosomal protein S6 n=6 Tax=Rhodocyclales TaxID=206389 RepID=A0A2T4IC86_9RHOO)

HSP 1 Score: 200 bits (509), Expect = 3.530e-64
Identity = 96/111 (86.49%), Postives = 102/111 (91.89%), Query Frame = 0
Query:    1 MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYPIAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPSPMMKEEKSKSL 111
            MRHYEVVFIVHPDQSEQVP M++RYKA+V AR G +HRLEDWGRRQM YPI K+HKAHYVLMNIECDGE LAELEHAFKFNDAVLRHLVVKM KA TTPSPMMKEEKS+SL
Sbjct:    1 MRHYEVVFIVHPDQSEQVPAMIDRYKAIVTAREGQIHRLEDWGRRQMAYPIQKVHKAHYVLMNIECDGEALAELEHAFKFNDAVLRHLVVKMKKAVTTPSPMMKEEKSRSL 111          
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Match: A0A5C9BPF7_9RHOO (30S ribosomal protein S6 n=3 Tax=Rhodocyclales TaxID=206389 RepID=A0A5C9BPF7_9RHOO)

HSP 1 Score: 200 bits (508), Expect = 4.700e-64
Identity = 94/112 (83.93%), Postives = 103/112 (91.96%), Query Frame = 0
Query:    1 MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYPIAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPSPMMKEEKSKSLM 112
            MRHYE+ FIVHPDQSEQVPGMVERY+A+VAA+NG +HRLEDWGRRQ+ YPI K+HKAHYVLMNIECDGETL ELEH+FKFNDAVLRHL VKM  A TTPSPMMKEEKSKS+M
Sbjct:    1 MRHYEICFIVHPDQSEQVPGMVERYRAIVAAKNGTIHRLEDWGRRQLAYPIQKIHKAHYVLMNIECDGETLNELEHSFKFNDAVLRHLTVKMKAAVTTPSPMMKEEKSKSMM 112          
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Match: A0A1F4FEY4_9PROT (30S ribosomal protein S6 n=5 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4FEY4_9PROT)

HSP 1 Score: 200 bits (509), Expect = 5.220e-64
Identity = 95/112 (84.82%), Postives = 103/112 (91.96%), Query Frame = 0
Query:    1 MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYPIAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPSPMMKEEKSKSLM 112
            MRHYE+VFIVHPDQSEQVP MVERYK ++A R+G +HRLEDWGRRQ+TYPI KMHKAHYVLMNIECD ETL ELEH+FKFNDAVLRHLVV+M KA TTPSPMMKEEKSKSLM
Sbjct:    1 MRHYEIVFIVHPDQSEQVPAMVERYKGVIAQRSGQVHRLEDWGRRQLTYPIQKMHKAHYVLMNIECDNETLGELEHSFKFNDAVLRHLVVRMPKAVTTPSPMMKEEKSKSLM 112          
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Match: A0A177R3P9_9PROT (30S ribosomal protein S6 n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177R3P9_9PROT)

HSP 1 Score: 199 bits (507), Expect = 8.390e-64
Identity = 97/134 (72.39%), Postives = 112/134 (83.58%), Query Frame = 0
Query:    1 MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYPIAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPSPMMKEEKSKSLMGEQRGERPXXXXXXXPQAQAQA 134
            MRHYE+VFIVHPDQSEQVP MVERYK  +A RNG +HRLEDWGRRQ+ YP+AK+HKAHYVLMNIECD ETL ELEH+FKF+DAVLRHL+++M KAHT+PSPMMKEEKSKSLM  + G RP       P+A+  A
Sbjct:    1 MRHYEIVFIVHPDQSEQVPQMVERYKGQIAQRNGTVHRLEDWGRRQLAYPLAKVHKAHYVLMNIECDNETLGELEHSFKFSDAVLRHLIIQMPKAHTSPSPMMKEEKSKSLMEGREG-RPAEAPAEPPRAERPA 133          
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Match: A0A518UAH4_9PROT (30S ribosomal protein S6 n=2 Tax=Denitratisoma TaxID=311181 RepID=A0A518UAH4_9PROT)

HSP 1 Score: 198 bits (504), Expect = 1.740e-63
Identity = 93/111 (83.78%), Postives = 101/111 (90.99%), Query Frame = 0
Query:    1 MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYPIAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPSPMMKEEKSKSL 111
            MRHYE+VFIVHPDQSEQVP M+ERY+ LV  RNG +HRLEDWGRRQM YPI K+HKAHYVLMNIECDGETLAELE+AFKFNDAVLRHL +KMDKA T PSPMMKEEKS+SL
Sbjct:    1 MRHYEIVFIVHPDQSEQVPAMIERYQTLVTGRNGAIHRLEDWGRRQMAYPIQKVHKAHYVLMNIECDGETLAELENAFKFNDAVLRHLTIKMDKAVTAPSPMMKEEKSRSL 111          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7892.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1G8C0Q7_9RHOO4.170e-6581.2030S ribosomal protein S6 n=1 Tax=Propionivibrio di... [more]
A0A6L5JV00_RHOTE6.520e-6584.8230S ribosomal protein S6 n=4 Tax=Rhodocyclus TaxID... [more]
A0A1J5RY63_9ZZZZ6.520e-6587.3930S ribosomal protein S6 n=1 Tax=mine drainage met... [more]
N6YX75_THAL41.190e-6486.4930S ribosomal protein S6 n=21 Tax=Betaproteobacter... [more]
A0A5C7K649_9RHOO3.210e-6484.8230S ribosomal protein S6 n=2 Tax=Rhodocyclaceae Ta... [more]
A0A2T4IC86_9RHOO3.530e-6486.4930S ribosomal protein S6 n=6 Tax=Rhodocyclales Tax... [more]
A0A5C9BPF7_9RHOO4.700e-6483.9330S ribosomal protein S6 n=3 Tax=Rhodocyclales Tax... [more]
A0A1F4FEY4_9PROT5.220e-6484.8230S ribosomal protein S6 n=5 Tax=unclassified Beta... [more]
A0A177R3P9_9PROT8.390e-6472.3930S ribosomal protein S6 n=1 Tax=Betaproteobacteri... [more]
A0A518UAH4_9PROT1.740e-6383.7830S ribosomal protein S6 n=2 Tax=Denitratisoma Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 1..117
e-value: 1.4E-31
score: 110.7
IPR000529Ribosomal protein S6PFAMPF01250Ribosomal_S6coord: 3..91
e-value: 7.8E-27
score: 93.4
IPR000529Ribosomal protein S6TIGRFAMTIGR00166TIGR00166coord: 1..93
e-value: 9.8E-33
score: 110.3
IPR000529Ribosomal protein S6PANTHERPTHR21011MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6coord: 1..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..123
NoneNo IPR availablePANTHERPTHR21011:SF128S RIBOSOMAL PROTEIN S6, MITOCHONDRIALcoord: 1..107
IPR020814Ribosomal protein S6, plastid/chloroplastHAMAPMF_00360Ribosomal_S6coord: 1..94
score: 21.559828
IPR020814Ribosomal protein S6, plastid/chloroplastCDDcd00473bS6coord: 3..91
e-value: 2.78375E-36
score: 117.936
IPR035980Ribosomal protein S6 superfamilySUPERFAMILY54995Ribosomal protein S6coord: 1..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7892contigP-wetherbeei_contig7892:454..858 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7892.2.1mRNA_P-wetherbeei_contig7892.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7892 454..858 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7892.2.1 ID=prot_P-wetherbeei_contig7892.2.1|Name=mRNA_P-wetherbeei_contig7892.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp
MRHYEVVFIVHPDQSEQVPGMVERYKALVAARNGVMHRLEDWGRRQMTYP
IAKMHKAHYVLMNIECDGETLAELEHAFKFNDAVLRHLVVKMDKAHTTPS
PMMKEEKSKSLMGEQRGERPADKPAEAPQAQAQA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR000529Ribosomal_S6
IPR020814Ribosomal_S6_plastid/chlpt
IPR035980Ribosomal_S6_sf