prot_P-wetherbeei_contig7889.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7889.1.1
Unique Nameprot_P-wetherbeei_contig7889.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length140
Homology
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BLAST of mRNA_P-wetherbeei_contig7889.1.1 vs. uniprot
Match: A0A6H5L2U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U3_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 8.810e-10
Identity = 53/148 (35.81%), Postives = 69/148 (46.62%), Query Frame = 0 
Query:    6 QRQELRRRYGDLPSESLGVLSRYRKLSFWLPAALAIPGG--------------------AAGERRRMAMLASRSLRARLCELAEIVISSEAATAPTARRREIGARRLFE---------LSGYRRAAFLSTACSSIALLALIFAGLCVW 124
            Q+  L RR G+ P      L+ YRKLSFWLP+ALA+                       A    RR AM  +RSLR RL E  E+V+ SEA T  T+ RRE G R+LF                  FLS+  +S+ L+  IFA +  +
Sbjct:   96 QKISLIRRCGEPPKVGRSSLNSYRKLSFWLPSALALADVGXXXXXXXXXXXXXXXXXXVAXARERRAAMFRNRSLRQRLSEACEVVMESEAVTGSTSSRRERGLRKLFAPPPSGLXXXXXXXHGQGFLSSTRNSVILIVGIFAAMVAY 243
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BLAST of mRNA_P-wetherbeei_contig7889.1.1 vs. uniprot
Match: D8LNG9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG9_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 4.320e-6
Identity = 43/109 (39.45%), Postives = 54/109 (49.54%), Query Frame = 0 
Query:    6 QRQELRRRYGDLPSESLGVLSRYRKLSFWLPAALAIP--GGAAGERRRM-------------------AMLASRSLRARLCELAEIVISSEAATAPTARRREIGARRLF 93
            Q+  L RR G+ P      L+ YRKLS+WLP+ALA+   GG                           AM  +RSLR RL E  E+V+ SEA T  T+ RRE G R+LF
Sbjct:  321 QKISLIRRCGEPPKVGRSSLNSYRKLSYWLPSALALADAGGXXXXXXXXXXXXXXXXXXXXXXXXXXAAMFRNRSLRQRLSEACEVVMESEAVTGSTSSRRERGLRKLF 429
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7889.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2U3_9PHAE8.810e-1035.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNG9_ECTSI4.320e-639.45RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7889contigP-wetherbeei_contig7889:778..1384 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7889.1.1mRNA_P-wetherbeei_contig7889.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7889 538..1774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7889.1.1 ID=prot_P-wetherbeei_contig7889.1.1|Name=mRNA_P-wetherbeei_contig7889.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=140bp
MLPPSQRQELRRRYGDLPSESLGVLSRYRKLSFWLPAALAIPGGAAGERR
RMAMLASRSLRARLCELAEIVISSEAATAPTARRREIGARRLFELSGYRR
AAFLSTACSSIALLALIFAGLCVWTGWGESVGVSGRFGL*
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