prot_P-wetherbeei_contig7887.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7887.2.1
Unique Nameprot_P-wetherbeei_contig7887.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length104
Homology
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Match: UPI0006943B7A (MarR family winged helix-turn-helix transcriptional regulator n=1 Tax=Imhoffiella purpurea TaxID=1249627 RepID=UPI0006943B7A)

HSP 1 Score: 83.6 bits (205), Expect = 1.740e-18
Identity = 44/92 (47.83%), Postives = 56/92 (60.87%), Query Frame = 0
Query:    8 FRDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSSTSRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLV 99
            FR +D   P Q +  FLF+A+  +E   ++ +    G VSSSTSRN+A LSK+HRL KPGLDL+E   DP D RYK V L  KG      L+
Sbjct:   24 FRTIDPDMPVQQIATFLFVAT--REGSSVKAISAGTGQVSSSTSRNIAALSKYHRLNKPGLDLIEAREDPADRRYKTVHLTPKGHMFAENLI 113          
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Match: UPI001032FB1B (MarR family winged helix-turn-helix transcriptional regulator n=2 Tax=Pseudomonas TaxID=286 RepID=UPI001032FB1B)

HSP 1 Score: 76.3 bits (186), Expect = 8.120e-16
Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:    3 HALAVFRDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSSTSRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLVNLI 102
              L  FRD D     QT Q F  IA A +  I M++L +++G+  +S SRNVA LS+ HRL K G+DLV    DP + R K VKL AKG++L   L  LI
Sbjct:   11 EVLKRFRDFDQEMQMQTAQTF--IAVALQPGITMKELSERVGISQASCSRNVAALSRVHRLNKAGMDLVVAAEDPMERRRKVVKLTAKGQRLAEALTKLI 108          
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Match: UPI001AE14A04 (MarR family winged helix-turn-helix transcriptional regulator n=1 Tax=Ruegeria sp. HKCCSP346 TaxID=2794830 RepID=UPI001AE14A04)

HSP 1 Score: 76.3 bits (186), Expect = 1.630e-15
Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 0
Query:    8 FRDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSSTSRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLVNLI 102
            FR++D+  P Q + C +++A+   E    ++L+D +GM SS+ SRN+  L+ +HRLGKPGL LVE   D  D R K V+L  KG+ L   ++N +
Sbjct:   24 FREVDSEMPVQQMLCLVWVAN--NEGKSQKELRDSLGMASSTASRNLNALADYHRLGKPGLGLVEMADDFRDRRQKVVRLTPKGRTLMNEVLNYV 116          
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Match: A0A435WT42_9HYPH (MarR family transcriptional regulator n=3 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A435WT42_9HYPH)

HSP 1 Score: 75.5 bits (184), Expect = 1.900e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 0
Query:    8 FRDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSSTSRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLVNLIG 103
            F  +D     Q +  FL +    K D+ MR+L+   G+ SSS SRNV+ LSK HR G+PG DLV TY D  D R KRVK   KG ++   L++++G
Sbjct:   24 FGKLDAEMQIQQIAVFLHVMG--KPDLTMRELETATGLSSSSVSRNVSALSKTHRKGQPGHDLVTTYEDAMDRRIKRVKPTPKGTKVFNTLISILG 117          
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Match: A0A502T8E3_9HYPH (MarR family transcriptional regulator n=2 Tax=Mesorhizobium TaxID=68287 RepID=A0A502T8E3_9HYPH)

HSP 1 Score: 75.1 bits (183), Expect = 2.250e-15
Identity = 46/103 (44.66%), Postives = 58/103 (56.31%), Query Frame = 0
Query:    1 MAHALAVFRDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSSTSRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLVNLIG 103
            M   L  F  +D     Q +  FL I   +K D+ MR+L+   G+ SSS SRNV+ LSK HR G+PG DLV TY D  D R KRVK   KG ++   L  +IG
Sbjct:   10 MLGLLDEFAKLDPEMQIQQISVFLRIV--EKPDLSMRELEQLTGLSSSSVSRNVSALSKVHRKGQPGHDLVATYEDTQDRRIKRVKPTPKGMKVFNTLNMVIG 110          
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Match: UPI00110DB7CD (MarR family winged helix-turn-helix transcriptional regulator n=1 Tax=Ruegeria sediminis TaxID=2583820 RepID=UPI00110DB7CD)

HSP 1 Score: 74.7 bits (182), Expect = 3.800e-15
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    9 RDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSSTSRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLV 99
            RD+D   P Q  Q  +F+ +A  E     DL+  + M+SS+ SRN+A LSK HRLGKPGL+L+E   +P D R K + L  KG+QL ++L+
Sbjct:   26 RDIDENMPLQ--QALVFLWAALNEGKTQVDLRRDLDMLSSTASRNLAALSKVHRLGKPGLNLIEWVENPEDRRAKLIYLTVKGRQLASKLL 114          
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Match: UPI000691998B (MarR family winged helix-turn-helix transcriptional regulator n=1 Tax=Methylobacterium sp. ZNC0032 TaxID=1339244 RepID=UPI000691998B)

HSP 1 Score: 73.9 bits (180), Expect = 1.210e-14
Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 0
Query:    1 MAHALAVFRDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSSTSRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLV 99
            +   L V RD +   P QT Q  L +A   +  + M+D+    G+  SS SRN+  L K HRLGKPG+DLVE   DP+D R K V L   G++L  +L+
Sbjct:   10 LIKVLQVLRDKEAEFPIQTAQTLLCVAL--QPGMTMQDIAKATGLSQSSASRNIQSLGKWHRLGKPGMDLVEAVEDPHDTRRKIVFLTKDGRELVGKLL 106          
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Match: A0A1J4QCJ4_9GAMM (Uncharacterized protein n=1 Tax=Oceanisphaera psychrotolerans TaxID=1414654 RepID=A0A1J4QCJ4_9GAMM)

HSP 1 Score: 72.8 bits (177), Expect = 2.050e-14
Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 0
Query:    1 MAHALAVFRDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSSTSRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLVNL 101
            +A ++   R+  +    Q    FL IA   +  I  +++  + G   SS SRN+A LSK HRLGKPGLDLV    DP + R K ++L +KGK+L ARL ++
Sbjct:   16 LAQSIGEIREASSDLTLQAAHMFLLIAV--QPGITSKEIIRETGFSQSSCSRNLAMLSKIHRLGKPGLDLVTAEEDPAERRRKALRLTSKGKELAARLADI 114          
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Match: A0A2G8RD03_9RHOB (Uncharacterized protein n=1 Tax=Puniceibacterium antarcticum TaxID=1206336 RepID=A0A2G8RD03_9RHOB)

HSP 1 Score: 71.6 bits (174), Expect = 5.670e-14
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    8 FRDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSSTSRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLV 99
            FR+ D   P Q  Q  +F   A  E    RD++D +G+ SS++SRN+A LS  HRLGKPGL L+E      D R K ++L+ KG+ L  RL+
Sbjct:   23 FREQDPDAPIQ--QALIFCWVALNEGRSQRDMRDALGIASSTSSRNLAALSSVHRLGKPGLGLIEWIESGEDRRVKMLQLSQKGRTLVHRLL 112          
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Match: A0A3T0CX77_9GAMM (Winged helix-turn-helix transcriptional regulator n=1 Tax=Marinobacter sp. NP-4(2019) TaxID=2488665 RepID=A0A3T0CX77_9GAMM)

HSP 1 Score: 70.9 bits (172), Expect = 1.160e-13
Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 0
Query:    1 MAHALAVFRDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSSTSRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLVNLI 102
            +  A+   R++ T  P QT+   L +A+     I + +L  + G+  SS SRN+A LSK HRLGKPGLDL E   DP + R K V L  KG++  A + + +
Sbjct:   16 LLSAVEEIRNISTDMPMQTLHILLLVAA--NPGITIAELIKKTGLSQSSCSRNLALLSKTHRLGKPGLDLAEAREDPRERRRKVVSLTPKGRETVALIADSV 115          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7887.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0006943B7A1.740e-1847.83MarR family winged helix-turn-helix transcriptiona... [more]
UPI001032FB1B8.120e-1646.00MarR family winged helix-turn-helix transcriptiona... [more]
UPI001AE14A041.630e-1541.05MarR family winged helix-turn-helix transcriptiona... [more]
A0A435WT42_9HYPH1.900e-1543.75MarR family transcriptional regulator n=3 Tax=uncl... [more]
A0A502T8E3_9HYPH2.250e-1544.66MarR family transcriptional regulator n=2 Tax=Meso... [more]
UPI00110DB7CD3.800e-1545.05MarR family winged helix-turn-helix transcriptiona... [more]
UPI000691998B1.210e-1441.41MarR family winged helix-turn-helix transcriptiona... [more]
A0A1J4QCJ4_9GAMM2.050e-1440.59Uncharacterized protein n=1 Tax=Oceanisphaera psyc... [more]
A0A2G8RD03_9RHOB5.670e-1443.48Uncharacterized protein n=1 Tax=Puniceibacterium a... [more]
A0A3T0CX77_9GAMM1.160e-1339.22Winged helix-turn-helix transcriptional regulator ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 3..102
e-value: 4.8E-13
score: 51.0
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 9..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7887contigP-wetherbeei_contig7887:1998..2309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7887.2.1mRNA_P-wetherbeei_contig7887.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7887 1986..2309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7887.2.1 ID=prot_P-wetherbeei_contig7887.2.1|Name=mRNA_P-wetherbeei_contig7887.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp
MAHALAVFRDMDTLCPAQTVQCFLFIASAQKEDIHMRDLQDQMGMVSSST
SRNVAYLSKHHRLGKPGLDLVETYYDPNDGRYKRVKLNAKGKQLKARLVN
LIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf