prot_P-wetherbeei_contig7853.1.3 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig7853.1.3
Unique Name	prot_P-wetherbeei_contig7853.1.3
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	213

Homology

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BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Match: G4ZPR3_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZPR3_PHYSP)

HSP 1 Score: 102 bits (255), Expect = 4.520e-23
Identity = 49/60 (81.67%), Postives = 58/60 (96.67%), Query Frame = 0

Query:   80 FGNVISARIMVDKQSGRSRGFGFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRG 139
            FGNVISARIMV+K++GRSRGFGFVS+D  PSAE+AIKGMNG+Q+GRKRLKVQHKKEK++G
Sbjct:  174 FGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEKNQG 233

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BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Match: D0NCQ3_PHYIT (CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phytophthora TaxID=4783 RepID=D0NCQ3_PHYIT)

HSP 1 Score: 102 bits (254), Expect = 5.850e-23
Identity = 49/60 (81.67%), Postives = 57/60 (95.00%), Query Frame = 0

Query:   80 FGNVISARIMVDKQSGRSRGFGFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRG 139
            FGNVISARIMV+K++GRSRGFGFVS+D  PSAE+AIKGMNG+Q+GRKRLKVQHKKEK +G
Sbjct:  172 FGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEKSQG 231

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BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Match: H3GBP4_PHYRM (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3GBP4_PHYRM)

HSP 1 Score: 102 bits (254), Expect = 7.260e-23
Identity = 49/60 (81.67%), Postives = 57/60 (95.00%), Query Frame = 0

Query:   80 FGNVISARIMVDKQSGRSRGFGFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRG 139
            FGNVISARIMV+K++GRSRGFGFVS+D  PSAE+AIKGMNG+Q+GRKRLKVQHKKEK +G
Sbjct:  181 FGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEKSQG 240

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BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Match: A0A425DDE5_9STRA (RRM domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DDE5_9STRA)

HSP 1 Score: 101 bits (252), Expect = 8.090e-23
Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 0

Query:   80 FGNVISARIMVDKQSGRSRGFGFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRGADV 142
            FGNVISARIMV+K+SGRSRGFGFVS+D  PSA++AIKGMNG+Q+GRKRLKVQHKKEK  G  +
Sbjct:  167 FGNVISARIMVEKESGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKGSGGGL 229

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BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Match: A0A024URK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URK9_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.070e-22
Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 0

Query:   80 FGNVISARIMVDKQSGRSRGFGFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRGADV 142
            FGNVISARIMV+K++GRSRGFGFVS+D  PSA++AIKGMNGYQ+GRKRLKVQHKKEK  G  +
Sbjct:  198 FGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGYQVGRKRLKVQHKKEKGSGGGL 260

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BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Match: A0A3R7MR42_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MR42_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.290e-22
Identity = 48/60 (80.00%), Postives = 58/60 (96.67%), Query Frame = 0

Query:   80 FGNVISARIMVDKQSGRSRGFGFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRG 139
            FGNVISARIMV+K++GRSRGFGFVS+D  PSA++AIKGMNG+Q+GRKRLKVQHKKEK++G
Sbjct:  175 FGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKNQG 234

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BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Match: W4HAQ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAQ7_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.390e-22
Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 0

Query:   80 FGNVISARIMVDKQSGRSRGFGFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRGADV 142
            FGNVISARIMV+K+SGRSRGFGFVS+D  PSA++AIKGMNG+Q+GRKRLKVQHKKEK  G  +
Sbjct:  194 FGNVISARIMVEKESGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKGSGGGL 256

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BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Match: A0A3M6VNC0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNC0_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.600e-22
Identity = 48/60 (80.00%), Postives = 57/60 (95.00%), Query Frame = 0

Query:   80 FGNVISARIMVDKQSGRSRGFGFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRG 139
            FGNVISARIMV+K++GRSRGFGFVS+D  PSA++AIKGMNG+Q+GRKRLKVQHKKEK +G
Sbjct:  170 FGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKSQG 229

[Close]

BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Match: A0A397DRE1_9STRA (RRM domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DRE1_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.870e-22
Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 0

Query:   80 FGNVISARIMVDKQSGRSRGFGFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRGADV 142
            FGNVISARIMV+K+SGRSRGFGFVS+D  PSA++AIKGMNG+Q+GRKRLKVQHKKEK  G  +
Sbjct:  210 FGNVISARIMVEKESGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKGSGGGL 272

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BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Match: M4B497_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B497_HYAAE)

HSP 1 Score: 101 bits (251), Expect = 1.880e-22
Identity = 48/60 (80.00%), Postives = 57/60 (95.00%), Query Frame = 0

Query:   80 FGNVISARIMVDKQSGRSRGFGFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRG 139
            FGNVISARIMV+K++GRSRGFGFVS+D  PSA++AIKGMNG+Q+GRKRLKVQHKKEK +G
Sbjct:  178 FGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEKSQG 237

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig7853.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
G4ZPR3_PHYSP	4.520e-23	81.67	Uncharacterized protein n=3 Tax=Phytophthora TaxID...	[more]
D0NCQ3_PHYIT	5.850e-23	81.67	CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phy...	[more]
H3GBP4_PHYRM	7.260e-23	81.67	Uncharacterized protein n=12 Tax=Phytophthora TaxI...	[more]
A0A425DDE5_9STRA	8.090e-23	77.78	RRM domain-containing protein n=2 Tax=Aphanomyces ...	[more]
A0A024URK9_9STRA	1.070e-22	77.78	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A3R7MR42_9STRA	1.290e-22	80.00	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
W4HAQ7_9STRA	1.390e-22	77.78	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A3M6VNC0_9STRA	1.600e-22	80.00	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
A0A397DRE1_9STRA	1.870e-22	77.78	RRM domain-containing protein n=2 Tax=Aphanomyces ...	[more]
M4B497_HYAAE	1.880e-22	80.00	Uncharacterized protein n=1 Tax=Hyaloperonospora a...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 47..131 e-value: 6.8E-12 score: 55.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 78..129 e-value: 4.3E-13 score: 48.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 39..135 score: 15.408587
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 61..192 e-value: 3.4E-19 score: 71.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..213
None	No IPR available	PANTHER	PTHR48024	GEO13361P1-RELATED	coord: 78..160
None	No IPR available	PANTHER	PTHR48024:SF29	GEO13361P1	coord: 78..160
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 78..162

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig7853	contig	P-wetherbeei_contig7853:788..2072 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig7853.1.3	mRNA_P-wetherbeei_contig7853.1.3	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig7853 788..2361 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig7853.1.3 ID=prot_P-wetherbeei_contig7853.1.3|Name=mRNA_P-wetherbeei_contig7853.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=213bp
MESWWPACASALLRLFARGKPPVSAHLRPVPLRPPYALFTEFIAHIHFVV
LSLRSPSFHSSFVSDLFFRSQSFALGINQFGNVISARIMVDKQSGRSRGF
GFVSFDYRPSAESAIKGMNGYQIGRKRLKVQHKKEKDRGADVARRVTTRT
HGSLPQFRQDDGLHDGGIDGLTDEERQEYEAAAAAAAHHQAHLAGGGGDE
RVHGADVDGVGAP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf