prot_P-wetherbeei_contig7827.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7827.1.1
Unique Nameprot_P-wetherbeei_contig7827.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length174
Homology
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Match: UPI000E1C253E (uncharacterized protein LOC112939069 n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=UPI000E1C253E)

HSP 1 Score: 137 bits (344), Expect = 3.690e-34
Identity = 69/165 (41.82%), Postives = 108/165 (65.45%), Query Frame = 0
Query:    5 RWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDFDTLSLSALVANINEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGGAELWQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRGSSILVIVLYVDDLLLTGNSEK 169
            +WV+K K N  G   KY  R+V KGF+Q   +D+      A VA +     +IALAA   W++Y  DV++A+LN  L EE+Y+E P+ FS +G G  ++++L ++LYGL+Q+   W + I ++F++ GF  + S P ++V++ G+ IL++ LYVDDL+ TGNSEK
Sbjct:  573 KWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDY--YETYAHVARLETIHTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPERFSVQG-GENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPILYVKKTGTDILIVSLYVDDLIYTGNSEK 734          
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Match: Q6I5H9_ORYSJ (Putative polyprotein n=8 Tax=Oryza sativa TaxID=4530 RepID=Q6I5H9_ORYSJ)

HSP 1 Score: 137 bits (344), Expect = 3.740e-34
Identity = 69/165 (41.82%), Postives = 108/165 (65.45%), Query Frame = 0
Query:    5 RWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDFDTLSLSALVANINEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGGAELWQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRGSSILVIVLYVDDLLLTGNSEK 169
            +WV+K K N  G   KY  R+V KGF+Q   +D+      A VA +     +IALAA   W++Y  DV++A+LN  L EE+Y+E P+ FS +G G  ++++L ++LYGL+Q+   W + I ++F++ GF  + S P ++V++ G+ IL++ LYVDDL+ TGNSEK
Sbjct:  674 KWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDY--YETYAHVARLETIHTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPERFSVQG-GENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPILYVKKTGTDILIVSLYVDDLIYTGNSEK 835          
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Match: Q9SHT5_ARATH (Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9SHT5_ARATH)

HSP 1 Score: 135 bits (341), Expect = 9.600e-34
Identity = 67/163 (41.10%), Postives = 107/163 (65.64%), Query Frame = 0
Query:    5 RWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDFDTLSLSALVANINEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGGAELWQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRGSSILVIVLYVDDLLLTGNS 167
            +WVFK KRN  G   KY  R+V KG+ Q   +D+D +   A VA I     +IALAA+ GW ++H DV+TA+L+  L E++Y+  P+GF+ +   G ++++LH++LYGL+Q+   WN  +++   E+ FV  S  PS++ R+    +L++ +YVDDLL+TG+S
Sbjct:  825 KWVFKIKRNSDGSINKYKARLVAKGYVQRHGIDYDEVF--AHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNEG-KVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQEEKKLLIVAIYVDDLLVTGSS 984          
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Match: A0A6D2LDQ7_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2LDQ7_9BRAS)

HSP 1 Score: 134 bits (338), Expect = 2.370e-33
Identity = 69/163 (42.33%), Postives = 107/163 (65.64%), Query Frame = 0
Query:    5 RWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDFDTLSLSALVANINEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGGAELWQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRGSSILVIVLYVDDLLLTGNS 167
            +WVFK KRN  G   KY  R+V KG+ Q   +DF+ +   A VA I     +IALAA+ GW ++H DV+TA+L+  L EE+Y+  PDGF  +G+   ++++LH++LYGL+Q+   WN  +++   E+GFV  S  PS++ +     +L++ +YVDDLL+TG+S
Sbjct:  551 KWVFKIKRNQDGSINKYKSRLVAKGYVQRHGVDFEEVF--APVARIETIRFIIALAASQGWEVHHLDVKTAFLHGELKEEVYVSQPDGFVIKGSED-KVYKLHKALYGLKQAPRAWNTKLNQILNELGFVKCSKEPSLYRKVEKDKLLLVAVYVDDLLVTGSS 710          
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Match: A0A4Y1QLI0_PRUDU (BURP domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QLI0_PRUDU)

HSP 1 Score: 131 bits (329), Expect = 3.130e-33
Identity = 66/166 (39.76%), Postives = 110/166 (66.27%), Query Frame = 0
Query:    5 RWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDFDTLSLSALVANINEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGGAELWQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRG-SSILVIVLYVDDLLLTGNSEK 169
            +WVFK K N+ G   K   R+V KG+ Q   +D++     A VA ++    +IALAA  GW+LY  DV++A+LN +L EE+Y++ P+GF  +G   +++++LH++LYGL+Q+   W + I  +F E GF  + S  +++V+ RG +SIL++ +YVDD++ TGN ++
Sbjct:   47 KWVFKTKLNLDGSVQKNKARLVAKGYSQKPGVDYNETF--APVARLDTIRTLIALAAQKGWQLYQLDVKSAFLNGILEEEVYVDQPEGFVVKGC-ESKVYRLHKALYGLKQAPRAWYSEIDGYFSECGFTKSQSEATLYVKARGEASILIVSIYVDDIVYTGNDQE 209          
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Match: A0A8J6CUZ6_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CUZ6_9ROSI)

HSP 1 Score: 134 bits (336), Expect = 4.370e-33
Identity = 69/167 (41.32%), Postives = 105/167 (62.87%), Query Frame = 0
Query:    5 RWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDF-DTLSLSALVANINEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGGAEL-WQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRGSSILVIVLYVDDLLLTGNSEK 169
            +W+FK KRN  G   +Y GR+VVKG+ Q   +DF +T S    V        V+ALA ++GW L   D+  A+LN  L EE+YM  P GF ++G  G +L  +L ++LYGL+Q+   W   + +F L  GFVA+ +  S+FV+R GS +L +++YVDD+++TGN+ +
Sbjct:  501 KWIFKLKRNAGGSIARYKGRLVVKGYLQEAGVDFQETFS---PVVKPTTIRVVLALAVSMGWSLRQVDINNAFLNGDLQEEIYMVQPPGFEQQGHDGQQLVCRLRKALYGLKQAPRAWFHKLKDFLLATGFVASKADNSLFVQRSGSQLLFVLVYVDDIIVTGNNSE 664          
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Match: A0A4Y1RM71_PRUDU (NAD(P)-binding Rossmann-fold superfamily protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RM71_PRUDU)

HSP 1 Score: 131 bits (330), Expect = 5.430e-33
Identity = 67/164 (40.85%), Postives = 104/164 (63.41%), Query Frame = 0
Query:    5 RWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDFDTLSLSALVANINEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGGAELWQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRGSSILVIVLYVDDLLLTGNSE 168
            +W+FK K N  G   K+  R+V +GF Q   +DF    + A VA +     +IALAA   W +Y  DV++A+LN +L EE+Y+E P GF   G G  ++++L ++LYGL+Q+   W A I ++F   GF  + S P++++ ++G+SIL++ LYVDDL+ TGN E
Sbjct:  113 KWIFKTKFNQDGGIQKHKARLVARGFTQKPGIDF--FEIFAPVARLETIRTLIALAAQKNWLIYQLDVKSAFLNGVLKEEVYVEQPQGFLVEG-GEDKVYKLKKALYGLKQAPRTWYAEIDKYFSHSGFQKSQSEPTLYILKKGASILIVSLYVDDLIFTGNDE 273          
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Match: A0A4Y1QR18_PRUDU (Multidrug resistance-associated protein 9 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QR18_PRUDU)

HSP 1 Score: 131 bits (330), Expect = 6.160e-33
Identity = 67/164 (40.85%), Postives = 104/164 (63.41%), Query Frame = 0
Query:    5 RWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDFDTLSLSALVANINEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGGAELWQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRGSSILVIVLYVDDLLLTGNSE 168
            +W+FK K N  G   K+  R+V +GF Q   +DF    + A VA +     +IALAA   W +Y  DV++A+LN +L EE+Y+E P GF   G G  ++++L ++LYGL+Q+   W A I ++F   GF  + S P++++ ++G+SIL++ LYVDDL+ TGN E
Sbjct:  320 KWIFKTKFNQDGGIQKHKARLVARGFTQKPGIDF--FEIFAPVARLETIRTLIALAAQKNWLIYQLDVKSAFLNGVLKEEVYVEQPQGFLVEG-GEDKVYKLKKALYGLKQAPRTWYAEIDKYFSHSGFQKSQSEPTLYILKKGASILIVSLYVDDLIFTGNDE 480          
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Match: A0A151R9W6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R9W6_CAJCA)

HSP 1 Score: 125 bits (314), Expect = 6.400e-33
Identity = 65/164 (39.63%), Postives = 107/164 (65.24%), Query Frame = 0
Query:    5 RWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDF-DTLSLSALVANINEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGGAELWQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRGSSILVIV-LYVDDLLLTGN 166
            +WV++ K N+ G   K+  R+ VKG+ Q   +D+ DT    ALVA       +++LAA  GW+++H DV++A+LN +L EE+Y+E PDGF   G    ++++LH++LYGL+Q+   W + I   FL+I F  + + P+++V+  G+   ++V LYVDDLL+TG+
Sbjct:   37 KWVYRTKLNLDGSIHKHKARLFVKGYSQMTGVDYSDTF---ALVARHETIRLIVSLAAQYGWKIFHLDVKSAFLNGVLQEEIYVEQPDGFIVAGH-EEKVYRLHKALYGLKQAPRAWYSRIDSHFLQINFKRSQNEPTLYVKDFGNGKQIVVSLYVDDLLITGD 196          
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Match: A0A5D3CLU6_CUCME (Reverse transcriptase n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3CLU6_CUCME)

HSP 1 Score: 129 bits (324), Expect = 2.480e-32
Identity = 67/168 (39.88%), Postives = 105/168 (62.50%), Query Frame = 0
Query:    5 RWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDFDTLSLSALVANINEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGGAELWQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRG-SSILVIVLYVDDLLLTGNSEKSY 171
            +WVFK KRN  GE  +Y  R+V KG+ Q   +D+D +   ALVA +     +IALA    W+++  DV++A+LN  L EE+Y+E P G+S +G     L +L ++LYGL+Q+   WN+ I+++FL+ G++      S++++  G   ILV+ LYVDDL+ TGN    +
Sbjct:  194 KWVFKIKRNEKGEVERYKARLVAKGYSQRKDIDYDEVF--ALVARLETIRLLIALATQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVL-KLEKTLYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMF 358          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7827.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000E1C253E3.690e-3441.82uncharacterized protein LOC112939069 n=1 Tax=Oryza... [more]
Q6I5H9_ORYSJ3.740e-3441.82Putative polyprotein n=8 Tax=Oryza sativa TaxID=45... [more]
Q9SHT5_ARATH9.600e-3441.10Putative retroelement pol polyprotein n=1 Tax=Arab... [more]
A0A6D2LDQ7_9BRAS2.370e-3342.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y1QLI0_PRUDU3.130e-3339.76BURP domain-containing protein n=1 Tax=Prunus dulc... [more]
A0A8J6CUZ6_9ROSI4.370e-3341.32Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y1RM71_PRUDU5.430e-3340.85NAD(P)-binding Rossmann-fold superfamily protein n... [more]
A0A4Y1QR18_PRUDU6.160e-3340.85Multidrug resistance-associated protein 9 n=1 Tax=... [more]
A0A151R9W6_CAJCA6.400e-3339.63Retrovirus-related Pol polyprotein from transposon... [more]
A0A5D3CLU6_CUCME2.480e-3239.88Reverse transcriptase n=1 Tax=Cucumis melo var. ma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 4..168
e-value: 4.6E-40
score: 137.8
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 6..169
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 64..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7827contigP-wetherbeei_contig7827:2145..2666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7827.1.1mRNA_P-wetherbeei_contig7827.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7827 2070..2842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7827.1.1 ID=prot_P-wetherbeei_contig7827.1.1|Name=mRNA_P-wetherbeei_contig7827.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp
MLKSRWVFKAKRNIAGETVKYNGRVVVKGFRQTLSLDFDTLSLSALVANI
NEFCCVIALAAALGWRLYHADVETAYLNALLGEELYMEAPDGFSERGAGG
AELWQLHRSLYGLRQSAFNWNATISEFFLEIGFVAASSSPSIFVRRRGSS
ILVIVLYVDDLLLTGNSEKSYSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR043502DNA/RNA_pol_sf