prot_P-wetherbeei_contig7820.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7820.1.1
Unique Nameprot_P-wetherbeei_contig7820.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length188
Homology
BLAST of mRNA_P-wetherbeei_contig7820.1.1 vs. uniprot
Match: A0A7S4ECG4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECG4_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 7.980e-19
Identity = 49/108 (45.37%), Postives = 63/108 (58.33%), Query Frame = 0
Query:   56 RDYASLAREYLSTQVYRDLQLSAPAVDCVVCRRRPAGLVLFPCSHRSVCGACWQDQPAGEK-------MCAVCGTAVKRAIPYADGREAQRYWAWVEEVKPPLPPGFA 156
            +DY +LA  Y   + YRDL  S P   CV+C R P   VLFPC H+ VC +C Q    GE        +C +C   +KR +P +DGRE ++YW WV EV+P LPP FA
Sbjct:  145 KDYIALADAYKLEKQYRDLT-SLPT--CVMCHRNPCHDVLFPCEHKCVCRSCLQTNGIGESREEGKWPLCPLCCQEIKRILP-SDGREVEKYWNWVLEVEPRLPPKFA 248          
BLAST of mRNA_P-wetherbeei_contig7820.1.1 vs. uniprot
Match: A0A7S4HUM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HUM7_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.500e-15
Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 0
Query:   56 RDYASLAREYLSTQVYRDLQLSAPAVD--CVVCRRR--PAGLVL----FPCSHRSVCGACWQDQPAGE----KMCAVCGTAVKRAIPYADGREAQRYWAWVEEVKPPLPPGFACEFKA 161
            +DY  LAR+Y ST+ YR    + P  +  CV+CRR    A +VL    FPC HR VC  C++++  G      MC +CG  +K  +   +G E +RYW WVEEVKP +P  F  +F+A
Sbjct:  367 KDYPGLARQYKSTEPYRG---NNPGGNPRCVLCRREGEDASVVLRRVFFPCEHRCVCNRCYREERMGPGRRANMCPLCGEEIK-FVAERNGSERERYWDWVEEVKPFIPAAFVRKFRA 480          
BLAST of mRNA_P-wetherbeei_contig7820.1.1 vs. uniprot
Match: A0A662XMJ4_9STRA (RING-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMJ4_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.050e-9
Identity = 35/88 (39.77%), Postives = 44/88 (50.00%), Query Frame = 0
Query:   83 CVVCRRRPAGLVLFPCSHRSVCGACWQDQ-------PAGEK-MCAVCGTAVKRAIPYADGREAQRYWAWVEEVKPPLPPGFACEFKAA 162
            CV C       V FPC H  VC  C +         P+ E  MC VC   ++  +P+  G+E ++YW WV EVKP LP  F  EFK A
Sbjct:  178 CVYCANARPTSVFFPCQHMCVCNDCIEQNNLSPDYSPSAEWCMCPVCAVDIRLILPHT-GKEEEKYWRWVLEVKPSLPSHFKQEFKEA 264          
BLAST of mRNA_P-wetherbeei_contig7820.1.1 vs. uniprot
Match: A0A662XL80_9STRA (RING-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XL80_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.760e-9
Identity = 42/134 (31.34%), Postives = 63/134 (47.01%), Query Frame = 0
Query:   56 RDYASLAREYLSTQVY-RDLQLSAPA-VDCVVCRRRPAGLVLFPCSHRSVCGACWQD-------QPAGEKMCAVCGTAVKRAIPYADGREAQRYWAWVEEVKPPLPPGFACEFKAAAVILQMKAEGTYVDDPPR 180
            ++Y  L + +   Q Y R    S P+   C+ C       V FPC H  VC  C +        QP+   +C +C T ++  +P+  G+E ++YW WV EVKP +P  F  EFK A   L+  +  +    P R
Sbjct:   98 KNYPELVKGFKQLQPYTRHPDGSYPSHTRCIYCANAGPTSVFFPCQHMCVCDDCIKAAKLSPDAQPSC--LCPICMTDIRLILPHT-GKEEEKYWKWVMEVKPSMPSHFKQEFKEAGKNLRKNSIASTEPAPRR 228          
BLAST of mRNA_P-wetherbeei_contig7820.1.1 vs. uniprot
Match: A0A6H5JCM1_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM1_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.260e-8
Identity = 30/81 (37.04%), Postives = 43/81 (53.09%), Query Frame = 0
Query:   49 MQQDNCCRDYASLAREYLSTQVYRDLQLSAPAVDCVVCRRRPAGLVLFPCSHRSVCGACWQDQPAG--------EKMCAVC 121
            ++ D  C+DY S A+EY  T  +RD   +     CV+C++R A  VLFPC H+ VC  C + +  G        E +C VC
Sbjct:  105 IEDDEPCKDYISFAKEYYLTAPFRD---TGGKQTCVICQKRKASAVLFPCEHKCVCARCIEREGFGATRTASEREALCPVC 182          
BLAST of mRNA_P-wetherbeei_contig7820.1.1 vs. uniprot
Match: A0A662XC14_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XC14_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 5.510e-8
Identity = 34/93 (36.56%), Postives = 44/93 (47.31%), Query Frame = 0
Query:   83 CVVCRRRPAGLVLFPCSHRSVCGACWQDQ-------PAGE------KMCAVCGTAVKRAIPYADGREAQRYWAWVEEVKPPLPPGFACEFKAA 162
            CV C       V FPC H  VC  C +         P+ E       + AVC   ++  +P+  G+E ++YW WV EVKP LP  F  EFK A
Sbjct:   54 CVYCANARPTSVFFPCQHMCVCNDCIEQNSLSPDYSPSAEWWYVLSLLSAVCAVDIRLILPHT-GKEEEKYWKWVMEVKPSLPSHFKQEFKEA 145          
BLAST of mRNA_P-wetherbeei_contig7820.1.1 vs. uniprot
Match: D8LJV1_ECTSI (Similar to Cell growth regulator with RING finger domain 1 (Cell growth regulatory gene 19 protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV1_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 1.610e-6
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 0
Query:   49 MQQDNCCRDYASLAREYLSTQVYRDLQLSAPAVDCVVCRRRPAGLVLFPCSHRSVCGACWQDQPAG--------EKMCAVC 121
            ++ D   +DY S A+EY  T  +RD   +     CV+C++R A  VLFPC H+ VC  C + +  G        E +C VC
Sbjct:  104 IEDDEPRKDYISFAKEYYLTAPFRD---TGGKQICVICQKRKASAVLFPCEHKCVCARCIESEGFGAMRKASEREALCPVC 181          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7820.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A7S4ECG4_9STRA7.980e-1945.37Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S4HUM7_9STRA1.500e-1541.53Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A662XMJ4_9STRA4.050e-939.77RING-type domain-containing protein n=1 Tax=Nothop... [more]
A0A662XL80_9STRA7.760e-931.34RING-type domain-containing protein n=1 Tax=Nothop... [more]
A0A6H5JCM1_9PHAE3.260e-837.04RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A662XC14_9STRA5.510e-836.56Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
D8LJV1_ECTSI1.610e-635.80Similar to Cell growth regulator with RING finger ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 82..127
e-value: 1.5E-9
score: 37.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 80..127
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 59..131
e-value: 8.7E-9
score: 36.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7820contigP-wetherbeei_contig7820:236..799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7820.1.1mRNA_P-wetherbeei_contig7820.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7820 127..1213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7820.1.1 ID=prot_P-wetherbeei_contig7820.1.1|Name=mRNA_P-wetherbeei_contig7820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp
MAAAFGGVTTKAAPSDQQHHPPKRKSSGKVAAATDFQAAEISSVAATAMQ
QDNCCRDYASLAREYLSTQVYRDLQLSAPAVDCVVCRRRPAGLVLFPCSH
RSVCGACWQDQPAGEKMCAVCGTAVKRAIPYADGREAQRYWAWVEEVKPP
LPPGFACEFKAAAVILQMKAEGTYVDDPPRKPCCIVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD