prot_P-wetherbeei_contig78.7.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig78.7.1
Unique Name	prot_P-wetherbeei_contig78.7.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	156

Homology

[Close]

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Match: A0A835ZQ88_9STRA (Light harvesting complex protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ88_9STRA)

HSP 1 Score: 234 bits (596), Expect = 7.110e-76
Identity = 113/153 (73.86%), Postives = 127/153 (83.01%), Query Frame = 0

Query:    1 GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEVWHPLYDGKVAPGLAAISQVPLAGWAQIVAAIAIIELTIGKQDYENKAPGDLGFGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQTPLTNLAT 153
            G DVETK V+DPL FSKDE ALFR R VELKHGR+ MLATLGY+ AEV+HPLYDGK+  GL AISQVP+AGW QI+AAI ++ELT+GKQD+ENKAPGDLGFG  FNPF +D   FA LQLKELKNGRLAMMG  GM+V E LTGQTPL  LA+
Sbjct:   47 GADVETKGVWDPLGFSKDEAALFRRRVVELKHGRICMLATLGYLVAEVYHPLYDGKIPAGLGAISQVPMAGWLQIIAAIGVVELTVGKQDFENKAPGDLGFGLGFNPFPNDPEKFAALQLKELKNGRLAMMGIMGMMVQEGLTGQTPLAQLAS 199

[Close]

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Match: A0A0G4EVU7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EVU7_VITBC)

HSP 1 Score: 216 bits (550), Expect = 6.350e-69
Identity = 107/151 (70.86%), Postives = 122/151 (80.79%), Query Frame = 0

Query:    1 GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEVWHPLYDGKVAPGLAAISQVPLAGWAQIVAAIAIIELTIGKQDYENKAPGDLGFGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQTPLTNL 151
            G DVET+ V+DPL FSKDE +L+RYR VELKHGRVAMLA LGY  AE+WHPLYDGKV PGL AISQVP AGW QI+A IA IEL+IGKQD+EN+APGDLGFG   NPF +D   FA+LQLKE+KNGRLAM+   GM+V E +TGQT L  L
Sbjct:   46 GADVETRGVWDPLGFSKDESSLYRYRAVELKHGRVAMLAVLGYFVAELWHPLYDGKVEPGLKAISQVPSAGWLQILATIAAIELSIGKQDFENRAPGDLGFG--INPFENDPVEFAKLQLKEIKNGRLAMIAIAGMLVQELVTGQTTLQQL 194

[Close]

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Match: D7FPU8_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPU8_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 3.520e-65
Identity = 99/154 (64.29%), Postives = 122/154 (79.22%), Query Frame = 0

Query:    1 GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEVWHPLYDGKVAPGLAAISQVPLAGWAQIVAAIAIIELTIGKQDYENKAPGDLG-FGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQTPLTNLAT 153
            G DVET  VFDPL + KD+ +LFR R VELKHGRVAMLA  GY+ AE WHPLYDGK++PGL A+ ++PLA W QI+ AIA++ELT+GKQDYENKAPG+LG FG A+NP+ D+  AF++LQLKELKNGRLAM+   G +V E LTGQT +  L +
Sbjct:   50 GADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPGLKALGELPLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTAIEQLTS 203

[Close]

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Match: W7TFG9_9STRA (Light harvesting complex protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFG9_9STRA)

HSP 1 Score: 204 bits (519), Expect = 2.870e-64
Identity = 98/152 (64.47%), Postives = 120/152 (78.95%), Query Frame = 0

Query:    1 GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEVWHPLYDGKVAPGLAAISQVPLAGWAQIVAAIAIIELTIGKQDYENKAPGDLGFGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQTPLTNLA 152
            G DVET  V+DPL FSKDEG+L+RYR VELKHGR+AMLA LG   +E +HPLYDGK++PG+ AI ++P   W QI+A I +IELT+GKQD ENKAPGDLGFG  FNPF +D   FAELQLKELKNGRLAM+G  G+++ E++TGQT    +A
Sbjct:   40 GSDVETGGVWDPLNFSKDEGSLYRYRAVELKHGRLAMLAVLGLWVSEFYHPLYDGKISPGIKAIGELPGPAWLQILATIGVIELTVGKQDTENKAPGDLGFGYNFNPFKNDPEKFAELQLKELKNGRLAMLGAAGILLQESITGQTCFEQIA 191

[Close]

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Match: A0A0G4GZZ5_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GZZ5_9ALVE)

HSP 1 Score: 167 bits (423), Expect = 7.330e-50
Identity = 89/146 (60.96%), Postives = 106/146 (72.60%), Query Frame = 0

Query:    1 GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEVWHPLYDGKVAPGLAAISQVPLAGWAQIVAAIAIIELTIGKQDYENKAPGDLGFGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQT 146
            G D+ET+  FDPLK +KDE  LFRYREVELKHGR+AMLA LGY TAE + P +DG V  GL AI +VP AGW QI+ AI   EL+ GKQ  +++APGD GFG  F  + D    FAELQLKELKNGRLAM+G + ++  EA TGQT
Sbjct:   44 GADMETRGPFDPLKLAKDEN-LFRYREVELKHGRLAMLAFLGYCTAEAYRPFFDGAVPNGLGAIGKVPTAGWLQILLAIGAYELSFGKQK-DDRAPGDYGFGIKF--YEDQPEKFAELQLKELKNGRLAMIGISAVLAAEAATGQT 185

[Close]

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Match: A0A7R9U311_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U311_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.960e-44
Identity = 85/153 (55.56%), Postives = 107/153 (69.93%), Query Frame = 0

Query:    1 GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEV-WHPLYDGKVAPGLAAISQVPLAGWAQIVAAIAIIELTIGKQDYENKAPGDL-GFGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQTPLTNL 151
            G DVET   +DPL  +K+E AL R R VELKHGRVAMLA LG +  +  +HPL+DGK+  G+ AIS+VP AGW QI+ AIA IEL  G  D E+K PGD+ GFG+AF P  +D   + +LQL+ELK+GRLAM+   G +V E +TGQT L  L
Sbjct:   42 GADVETNGFWDPLGLAKNEEALGRRRHVELKHGRVAMLAVLGNIVTDAGYHPLFDGKIPAGIGAISKVPTAGWVQILFAIAAIELRYGGYD-ESKTPGDIAGFGSAFIP--EDPVEYEKLQLRELKHGRLAMIAILGELVQEQITGQTVLQQL 191

[Close]

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Match: W7U405_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U405_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.230e-43
Identity = 92/156 (58.97%), Postives = 105/156 (67.31%), Query Frame = 0

Query:    1 GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEVWHPLYDGKVAPG-LAAISQV----PLAGWAQIVAAIAIIELTIGKQDYENKAPGDLGFGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQTPLTNL 151
            G DVET  VFDPL  +KDE +L+R R +ELKHGRVAMLA LG +    +H   +    P  LAA++QV    P+A W QI  AI  IELTIGKQD  N+APGD+GFGAAF P  DDA  FA LQLKELKNGRLAMM   G  V E LTGQ P+  L
Sbjct:   39 GSDVETNGVFDPLGLAKDEASLYRSRLIELKHGRVAMLACLGTLVQSFYHLPDEVFSNPRPLAALAQVYSERPVAFW-QIFLAIGAIELTIGKQDTANRAPGDVGFGAAFIP--DDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQL 191

[Close]

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Match: A0A835ZAI4_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI4_9STRA)

HSP 1 Score: 150 bits (378), Expect = 9.370e-43
Identity = 90/158 (56.96%), Postives = 103/158 (65.19%), Query Frame = 0

Query:    1 GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEVWHPLYDG------KVAPGLAAISQVPLAGWAQIVAAIAIIELTIGKQDYENKAPGDLG-FGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQTPLTNL 151
            G+DVET  +FDPL FSKDE +LFR R VELKHGR+ MLAT G +     H L D        +   L  + Q P+A   QI+ AI ++ELT G QDY NKAPGDLG FG AF P  DDA   AELQLKELKNGRLAMMG  GM+V E LT Q P+  L
Sbjct:   48 GIDVETGGLFDPLGFSKDEASLFRRRAVELKHGRICMLATFGVLVQTYVH-LPDAVFSNPRPIGALLQVLDQRPVAA-IQILLAIGLLELTAGAQDYANKAPGDLGRFGDAFKP--DDAGELAELQLKELKNGRLAMMGIMGMLVQEGLTKQGPIEQL 201

[Close]

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Match: A0A835ZIK7_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIK7_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.350e-41
Identity = 86/159 (54.09%), Postives = 107/159 (67.30%), Query Frame = 0

Query:    1 GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEVWH---PLYDGKVAPGLAAISQV----PLAGWAQIVAAIAIIELTIGKQDYENKAPGDLG-FGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQTPLTNL 151
            G D+ET  V+DPL+ SKD+G LF+YREVELKHGRVAMLATLG +     H   P++       LAA+SQ+    P+A W QI  A+   EL+IGKQDYENKAPGD+  FG    P  +D   + ++QL+ELKNGRLAM+   GM V EALTGQ P+  L
Sbjct:   20 GADIETSGVWDPLRLSKDDGNLFKYREVELKHGRVAMLATLGVLVQSFNHLPDPVFSNP--RPLAALSQILAERPVAFW-QIFLAVGAFELSIGKQDYENKAPGDIATFGDFVKPSDEDE--WEKIQLRELKNGRLAMVASIGMFVQEALTGQGPIEQL 173

[Close]

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Match: A0A0G4GDB0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GDB0_VITBC)

HSP 1 Score: 141 bits (355), Expect = 2.620e-39
Identity = 89/153 (58.17%), Postives = 104/153 (67.97%), Query Frame = 0

Query:    1 GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEVWHPLYDGKVAPG--LAAISQV----PLAGWAQIVAAIAIIELTIGKQDYENKAPGDLG-FGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQT 146
            G DVET  VFDPLKFS+DE +LFR R VELKHGR+AMLA LGY        L D   +    L+A+++V    P A  AQIVAAIA IEL  G+QDYENKAPGDLG FG +F     D   F + QL+ELKNGRLAM+G  GM+V E LTGQ+
Sbjct:   51 GADVETGGVFDPLKFSEDEASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPDPVFSEPRPLSALTKVLTERPWAA-AQIVAAIAAIELGPGRQDYENKAPGDLGYFGDSFKN--SDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQS 200

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig78.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZQ88_9STRA	7.110e-76	73.86	Light harvesting complex protein n=2 Tax=Tribonema...	[more]
A0A0G4EVU7_VITBC	6.350e-69	70.86	Uncharacterized protein n=1 Tax=Vitrella brassicaf...	[more]
D7FPU8_ECTSI	3.520e-65	64.29	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
W7TFG9_9STRA	2.870e-64	64.47	Light harvesting complex protein n=2 Tax=Monodopsi...	[more]
A0A0G4GZZ5_9ALVE	7.330e-50	60.96	Uncharacterized protein n=1 Tax=Chromera velia CCM...	[more]
A0A7R9U311_9STRA	5.960e-44	55.56	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
W7U405_9STRA	1.230e-43	58.97	Light-harvesting protein n=2 Tax=Monodopsidaceae T...	[more]
A0A835ZAI4_9STRA	9.370e-43	56.96	Light harvesting complex protein n=1 Tax=Tribonema...	[more]
A0A835ZIK7_9STRA	1.350e-41	54.09	Chlorophyll a/b-binding protein domain-containing ...	[more]
A0A0G4GDB0_VITBC	2.620e-39	58.17	Uncharacterized protein n=2 Tax=Vitrella brassicaf...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 8..140 e-value: 1.1E-34 score: 120.3
None	No IPR available	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 3..155 e-value: 1.3E-42 score: 147.9
None	No IPR available	PANTHER	PTHR21649:SF89	CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC	coord: 7..153
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 8..154
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 7..153

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig78	contig	P-wetherbeei_contig78:6628..7464 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig78.7.1	mRNA_P-wetherbeei_contig78.7.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig78 6628..7464 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig78.7.1 ID=prot_P-wetherbeei_contig78.7.1|Name=mRNA_P-wetherbeei_contig78.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
GVDVETKTVFDPLKFSKDEGALFRYREVELKHGRVAMLATLGYVTAEVWH
PLYDGKVAPGLAAISQVPLAGWAQIVAAIAIIELTIGKQDYENKAPGDLG
FGAAFNPFADDAAAFAELQLKELKNGRLAMMGFTGMVVHEALTGQTPLTN
LATFF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln