prot_P-wetherbeei_contig7713.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7713.2.1
Unique Nameprot_P-wetherbeei_contig7713.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length250
Homology
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A6H5JUC6_9PHAE (TOPEUc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC6_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 2.860e-50
Identity = 94/183 (51.37%), Postives = 126/183 (68.85%), Query Frame = 0
Query:   68 GSSGSAAVAPARKRAATGAKEPQKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 250
            G++G +   P R +A    K P+K K +TR EKIE A+K Y WWEE   E GKQW+ +EHNG +F+ EY+PHGVK+ YDG  + LT ++EEVA+FYA++P DGPQL  A+  K F KNFF+D++ +LGKGH ++ F   DF  I+ HLD  K  K++ TDGE+A AK  KE L+  Y +AIVD
Sbjct:  366 GAAGQSRAPPPRTKAQAKDKAPKKPKKLTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVNLTTQQEEVATFYASMPLDGPQL--AEQGKVFNKNFFTDFKAVLGKGHFIKDFKLLDFSAIRAHLDITKQIKRAATDGEKAAAKTVKEELVHKYSYAIVD 546          
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A836C9X0_9STRA (DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.350e-49
Identity = 84/148 (56.76%), Postives = 111/148 (75.00%), Query Frame = 0
Query:  105 LKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQS--FSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 250
            L+AYKWWEE PL  G+QW+H+EHNG++F  EYEPHGV ++YDG  + L+ E+EE+A+F+A+VP DGPQL +A TAK F  NFFSDW+E +  GH +++  F KCDF  ++ HL Q++L KK+ TDGERA AK EKE     +G AIVD
Sbjct:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVD 200          
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A7S2CY07_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY07_9STRA)

HSP 1 Score: 181 bits (459), Expect = 9.860e-49
Identity = 85/159 (53.46%), Postives = 114/159 (71.70%), Query Frame = 0
Query:   92 FKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 250
             K M +ME+++ A+KA+KWWE   L DG QW  +EHNG+ F  EYEPHGV +LY G P+ L+ E EE+A+FYA VP+DGPQL + +T   F+KNFF+D++++LGK H+VQ F  CDF  I  ++ +QK+  K+ TD E+A  K EKE L F YGFAIVD
Sbjct:  179 LKQMNKMERLDQAMKAFKWWEHEDLPDGVQWLGMEHNGLAFPPEYEPHGVPLLYKGEPIELSPELEELATFYAAVPDDGPQLGDPETRTIFQKNFFTDFKKMLGKSHKVQEFKHCDFSRIAANIAEQKMINKAATDVEKANKKREKEELQFKYGFAIVD 337          
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: D7G042_ECTSI (TOPEUc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G042_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 9.080e-48
Identity = 90/165 (54.55%), Postives = 117/165 (70.91%), Query Frame = 0
Query:   87 KEPQKFKDMT-RMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 250
            K P+ FK+MT R EKIE A+K Y WWEE   E GKQW+ +EHNG +F+ EY+PHGVK+ YDG  + LT ++EEVA+FYA++P DGPQL  A+  K F KNFF+D++ +LGKGH ++ F   DF  I+ HLD  K  K + TDGE+A AK  KE L+  Y +AIVD
Sbjct:  332 KAPKGFKEMTTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVHLTTQQEEVATFYASMPLDGPQL--AEQGKVFNKNFFTDFKAVLGKGHVIKDFKLLDFSAIRAHLDITKQIKLAATDGEKAAAKTVKEELVHKYSYAIVD 494          
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A7S1CPK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPK8_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.710e-46
Identity = 74/162 (45.68%), Postives = 108/162 (66.67%), Query Frame = 0
Query:   89 PQKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 250
            P+K K +T  EK++ A+ +YKWW++  L  G  W  +EH GV FS EY PHG++M YDG P+ LT  +EEVA++YA VP DGP L + +TA+ F +NFF DWRELLG+ HE+Q F KC+F PI+ ++ +++  KK+ T  E+      ++ +   YG+  VD
Sbjct:   35 PKKKKALTATEKLDLAMTSYKWWDDEELPKGINWRTLEHCGVAFSDEYTPHGIRMFYDGKPVELTPAQEEVATWYATVPPDGPHLGKPETAEIFNRNFFRDWRELLGEHHEIQEFEKCNFDPIRAYVQEEREKKKAMTKEEKEENSKTRKQMQLKYGYCFVD 196          
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A7S2WTQ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ7_9STRA)

HSP 1 Score: 172 bits (437), Expect = 8.550e-46
Identity = 77/160 (48.12%), Postives = 116/160 (72.50%), Query Frame = 0
Query:   91 KFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 250
            K K  T++E+++ A+K+YKWWE   L  G+QW  +EHNG+ F  EY+PHGV + Y+G  LVL  + EE+A+FY  VP+DGPQL + +T   F+KNFF+D+++ LG  HE++ F  CDF  I+EH+++++L KK+ T+ E+  AK EK++L F YG+A+VD
Sbjct:  140 KLKKFTKVERLDQAMKSYKWWEHEDLPAGQQWRTLEHNGLCFPPEYKPHGVALKYEGKDLVLPPDLEELATFYGLVPDDGPQLGDPETRPIFQKNFFTDFKKALGGEHEIKKFQGCDFSAIREHIEKERLIKKAATEVEKQAAKEEKQSLQFKYGYALVD 299          
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A418F2Z5_9STRA (Topoisom_I_N domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418F2Z5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.390e-45
Identity = 76/161 (47.20%), Postives = 107/161 (66.46%), Query Frame = 0
Query:   90 QKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 250
            +K K  ++ E+++ A+KAY+WW    L +G QW  +EHNGV F   YEPHG+ +LYDG P+ LT E+EE+ASF+A +P DGPQL    TA  F KNFF+D++  LGK H ++   KC+F  I+ HL   +  KK RT  E+A  K +K+  L+ +GFAI+D
Sbjct:  103 RKLKVQSKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPVLYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFKASLGKNHVIKDIKKCNFDKIQAHLADLRDVKKDRTKEEKAPEKVKKDEELYRHGFAIID 263          
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A7S2MAS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAS9_9STRA)

HSP 1 Score: 164 bits (414), Expect = 4.200e-45
Identity = 78/164 (47.56%), Postives = 108/164 (65.85%), Query Frame = 0
Query:   87 KEPQKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 250
            KE +  K + + E+I HA++AY WW       G+QW  +EH GV+F   YEPHGVKM YDG  + LT  EEE A+F+A +  DG  L  + TA  F+KNFF+D++ +LGK H ++ F KCDF PI  HLD+QK+ +K+ TD ER   K  K+T +F +G+A+VD
Sbjct:  115 KEVKGLKQLDKSERISHAMQAYLWWNADDPPKGQQWCKMEHAGVSFPEGYEPHGVKMRYDGKEVDLTPVEEEAATFFAAMDPDGMHLGNSKTAPIFKKNFFTDFKAILGKNHVIKDFKKCDFTPITAHLDEQKIVRKAITDAERKQNKNVKDTAMFKFGYALVD 278          
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: A0A024UDN4_9STRA (DNA topoisomerase I n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDN4_9STRA)

HSP 1 Score: 167 bits (424), Expect = 3.140e-44
Identity = 78/161 (48.45%), Postives = 109/161 (67.70%), Query Frame = 0
Query:   90 QKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 250
            +K K   + E+++ A+KAY+WW    L +G QW  +EHNGV F   YEPHG+ ++YDG P+ LT E+EE+ASF+A +P DGPQL    TA  F KNFF+D+R  LGK H ++   KC+F  I+ HL++ + AKK RT  E+A  K +K+  L+ +GFAIVD
Sbjct:  105 RKLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPLIYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFRASLGKNHVIKDIKKCNFERIQAHLNEIRDAKKERTKEEKAPEKAKKDEELYRHGFAIVD 265          
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Match: K3WII9_GLOUD (DNA topoisomerase I n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WII9_GLOUD)

HSP 1 Score: 167 bits (424), Expect = 4.360e-44
Identity = 86/179 (48.04%), Postives = 118/179 (65.92%), Query Frame = 0
Query:   72 SAAVAPARKRAATGAKEPQKFKDMTRMEKIEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPLVLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEVQSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD 250
            SA+ + AR +   GA   +K K  ++ E+++ A+KAY+WW    L +G QW  +EHNGV F   Y PH V M+YDG  + LTA +EE+ASFYA +P+DGPQL     AK F +NFF+D+R+ LGK HEV+ F  CDF  I  +L++Q+  KK+ T  E+A  K +KE  LFT GFA+VD
Sbjct:  129 SASDSKARVKKENGAASMRKLKVHSKAERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVMFPPAYIPHHVPMVYDGKEVKLTATQEEIASFYAAIPKDGPQLGTPTIAKKFNQNFFADFRKALGKNHEVKKFELCDFSKIAAYLEEQREEKKNMTKDEKAPEKEKKEMELFTNGFAVVD 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7713.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUC6_9PHAE2.860e-5051.37TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A836C9X0_9STRA1.350e-4956.76DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2CY07_9STRA9.860e-4953.46Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D7G042_ECTSI9.080e-4854.55TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S1CPK8_9STRA1.710e-4645.68Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2WTQ7_9STRA8.550e-4648.13Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A418F2Z5_9STRA1.390e-4547.20Topoisom_I_N domain-containing protein (Fragment) ... [more]
A0A7S2MAS9_9STRA4.200e-4547.56Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A024UDN4_9STRA3.140e-4448.45DNA topoisomerase I n=2 Tax=Aphanomyces invadans T... [more]
K3WII9_GLOUD4.360e-4448.04DNA topoisomerase I n=1 Tax=Globisporangium ultimu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008336DNA topoisomerase I, DNA binding, eukaryotic-typePFAMPF02919Topoisom_I_Ncoord: 121..250
e-value: 2.5E-34
score: 118.6
IPR013030DNA topoisomerase I, DNA binding, N-terminal domain 2GENE3D2.170.11.10DNA Topoisomerase I, domain 2coord: 121..250
e-value: 6.7E-30
score: 106.2
IPR013034DNA topoisomerase I, DNA binding, N-terminal domain 1GENE3D1.10.10.41coord: 137..225
e-value: 6.7E-30
score: 106.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..93
NoneNo IPR availablePANTHERPTHR10290DNA TOPOISOMERASE Icoord: 8..250
IPR036202DNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamilySUPERFAMILY56741Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragmentcoord: 107..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7713contigP-wetherbeei_contig7713:1049..2932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7713.2.1mRNA_P-wetherbeei_contig7713.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7713 1049..2932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7713.2.1 ID=prot_P-wetherbeei_contig7713.2.1|Name=mRNA_P-wetherbeei_contig7713.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=250bp
DGDFEPRKKKAAAASKKRARPASSDSDGGGDNSDDGSDAKPAKGKGKGKR
AAAAAAAKKKAAPRAPRGSSGSAAVAPARKRAATGAKEPQKFKDMTRMEK
IEHALKAYKWWEEAPLEDGKQWNHIEHNGVNFSAEYEPHGVKMLYDGTPL
VLTAEEEEVASFYANVPEDGPQLKEADTAKTFRKNFFSDWRELLGKGHEV
QSFSKCDFRPIKEHLDQQKLAKKSRTDGERATAKGEKETLLFTYGFAIVD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008336TopoI_DNA-bd_euk
IPR013030DNA_topo_DNA_db_N_dom2
IPR013034DNA_topo_DNA_db_N_dom1
IPR036202TopoI_DNA-bd_euk_N_sf