prot_P-wetherbeei_contig77.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig77.1.1
Unique Nameprot_P-wetherbeei_contig77.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length78
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig77.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 25..69
e-value: 1.2E-8
score: 34.8
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 1..76
score: 14.459919
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 1..74
e-value: 1.6E-13
score: 52.1
IPR035441TFIIS/LEDGF domain superfamilySUPERFAMILY47676Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 3..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig77contigP-wetherbeei_contig77:807..1040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig77.1.1mRNA_P-wetherbeei_contig77.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig77 590..1040 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig77.1.1 ID=prot_P-wetherbeei_contig77.1.1|Name=mRNA_P-wetherbeei_contig77.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp
MTRLTKVLEGAVDRSVAAEKAVRALGKLQAIDATVELLKDSGAGRVVAAL
RKHADADVAKAAKRVKKHWLGQLNLGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017923TFIIS_N
IPR035441TFIIS/LEDGF_dom_sf