prot_P-wetherbeei_contig7683.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7683.1.1
Unique Nameprot_P-wetherbeei_contig7683.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length447
Homology
BLAST of mRNA_P-wetherbeei_contig7683.1.1 vs. uniprot
Match: D8LGY8_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY8_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 2.010e-31
Identity = 151/357 (42.30%), Postives = 196/357 (54.90%), Query Frame = 0
Query:   16 GITLRELKKNLQQSFERTGVLDDLMAQLRRQFVGELRSRGLAAAPPGSREAA----TGKRRRRPLG--LEEQLHNSLVADHLRRRGLSQTLAVFLPESGLGSAA--------ATGASRSGSADAAISTPEDTLRGLLVEPGSALYKRVLARIR----KVPSSTANASPENS-VDKDGGNIDENDSGNGGVPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA-----------------AQTDEAGPRAREALEARLAGVQDRWLENSRRERNAPARGAEERMLAFQREAETRARRDADTEAARRLVHEA----------AAAEAAAAARVRREVDAVRQELRAEHDARVERLQ 326
            G +L ++K+ L+ +F  TGV+DD+ A+LRRQFV ELR +GL    PG++EAA    T +RRR P G  L+E++ +SLV DHL   GL Q+LAVFLPESGLG  +         TG   + +A+AA+S  ED L+ L +   S L++RV+ R      K   S   +  E + V       D     N  V   XXXXXXXXXXXXXXXXXXX            A                  QTDEAG   +E L  RL  V++ WL  S  ER  PA+   ERMLA+QRE E+RA   A    A RL+ +A          AA     A+  RREVDA+R+EL++++DARVERLQ
Sbjct:   47 GASLHDVKRALRDNFRATGVIDDVTARLRRQFVLELRRKGLGV--PGAQEAAVAAGTCRRRRSPSGISLQERVLHSLVVDHLASNGLLQSLAVFLPESGLGGGSNCGNTATVGTGPGAAPAAEAALSR-EDVLQALPIPADSNLFRRVIRRAEEGEGKAAGSVCRSDGETAAVPGAAAGADTAVVSNASVAVXXXXXXXXXXXXXXXXXXXXSREQKRVCGLLEALVGEVATRSRAVAVDSNTQTDEAGRSHKENLVTRLEAVRETWLRRSADERREPAQDVTERMLAYQRECESRAAAQASCWVAPRLLIKAERDSFRERDLAALRVQMASTRRREVDAMRKELQSQYDARVERLQ 400          
BLAST of mRNA_P-wetherbeei_contig7683.1.1 vs. uniprot
Match: A0A835Z6Y0_9STRA (LisH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Y0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.740e-11
Identity = 44/94 (46.81%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   15 DGITLRELKKNLQQSFERTGVLDDLMAQLRRQFVGELRSRGLAAAPPGSREAATGKRRRRPLGLEEQLHNSLVADHLRRRGLSQTLAVFLPESG 108
            D ++L EL+  L+ SF  TGVL D+ A+LRRQFV EL         P + +A    R+   L L ++   +LVAD LR +GL Q+LAVFLPESG
Sbjct:   15 DELSLHELRDRLRTSFRETGVLADITARLRRQFVAELVQHHHG---PPAMKALVANRQISELPLTQRQLRNLVADFLRAQGLLQSLAVFLPESG 105          
BLAST of mRNA_P-wetherbeei_contig7683.1.1 vs. uniprot
Match: A0A7R9UEH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEH8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.010e-5
Identity = 36/93 (38.71%), Postives = 50/93 (53.76%), Query Frame = 0
Query:   17 ITLRELKKNLQQSFERTGVLDDLMAQLRRQFVGELRSRGLAAAPPGSREAATGKRRRRPLGLEEQLHNSLVADHLRRRGLSQTLAVFLPESGL 109
            +TL EL+++L   F   GVL  + AQLRR F+  ++  G  A               R L L E    SL+ +HL+R+ L  ++AVFLPESGL
Sbjct:   40 MTLEELRESLLAHFADAGVLSSVKAQLRRHFLDSMKDLGSDAEE-------------RELNLPESAVYSLILNHLQRKNLPHSVAVFLPESGL 119          
BLAST of mRNA_P-wetherbeei_contig7683.1.1 vs. uniprot
Match: UPI0013903D70 (oral-facial-digital syndrome 1 protein homolog isoform X1 n=3 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013903D70)

HSP 1 Score: 57.8 bits (138), Expect = 3.650e-5
Identity = 84/356 (23.60%), Postives = 139/356 (39.04%), Query Frame = 0
Query:   17 ITLRELKKNLQQSFERTGVLDDLMAQLRRQFVGELRSRGLAAAPPGSREAATGKRRRRPLGLEEQLHNSLVADHLRRRGLSQTLAVFLPESGLGSAAATGASRSGSADAAISTPEDTLRGLLVEPGSALYKRVLARIRKVPSSTA-------NASPENSVDKDGGNIDENDSGNGGVPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQTDEAGPRAREALEARLAGVQDRWLENSRRERNAPARGAEERMLAFQREAETRARRDADTEAARRLVHEAAAAEAAAAARVRREVDAVRQELRAEHDARVERLQAAVAAAEQXXXXXXXXADAAQYEARQRLLQEMDALRTRE 365
            ++  +L++ L  +F   GV+D L +QLR + V EL+         G ++            L  Q  NSLVA+HL       TL+VFLPE G             S D   S+  D    L +EPGS LY  + + + K   S++         S  N   K G                                               A QT++ G  ++ +++ +L  +   + E + +E++A    AE+R++AFQ++ E R + +   E  R    E A        R  +E+ A +  L  ++  + E L+       +         +   Y  RQ++L+EM A+R RE
Sbjct:    6 LSREDLREKLFYTFRNRGVIDSLKSQLRNRLVLELQQTANINIASGKKKTTD------QTSLYYQAANSLVANHLENCNFEYTLSVFLPECGT------------SKDKLFSS-HDICHLLKIEPGSPLYNSLSSFLTKSSKSSSFLWELLCQLSKLNLTTKQG---------------------------------------------TIAVQTED-GCTSKTSIDEKLRSIDKVYSERAEKEQDAWNSQAEQRIIAFQQQCEERKKAELTEEIQRFKSTELARMRVEEKERYHKEITATKDMLEKDYALKAEVLRVKEKETVERLHRQEQLQEEEAYAQRQKMLEEMQAVRDRE 296          
BLAST of mRNA_P-wetherbeei_contig7683.1.1 vs. uniprot
Match: A0A507FQQ4_9FUNG (LisH domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FQQ4_9FUNG)

HSP 1 Score: 57.0 bits (136), Expect = 6.110e-5
Identity = 43/151 (28.48%), Postives = 69/151 (45.70%), Query Frame = 0
Query:   13 DVDGITLRELKKNLQQSFERTGVLDDLMAQLRRQFVGELRSRGLAAAP--PGSREAATGKRRRRPLGLEEQLHNSLVADHLRRRGLSQTLAVFLPESGLGSAAATGASRSGSADAAISTPEDTLRGLLVEPGSALYKRVLARIRKVPSSTA 161
            D   +T RE + +L ++ +  G+ D L +QLR   V EL+ + L      P S   +          L  +L +SLV DHL+++G   TL+VF+PE+GL            +   A+   ED  R L +   + L +   A I   P + +
Sbjct:   10 DESQMTRREFRYSLLETMKENGIADKLKSQLRASLVAELKKKSLFTQKTHPNSELCSP---------LTTRLIDSLVVDHLKKKGSEFTLSVFVPEAGL------------NVHGALLAEEDIYRVLHLNAATTLVRSYKAHIDSFPQTAS 139          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7683.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LGY8_ECTSI2.010e-3142.30LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z6Y0_9STRA1.740e-1146.81LisH domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7R9UEH8_9STRA1.010e-538.71Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
UPI0013903D703.650e-523.60oral-facial-digital syndrome 1 protein homolog iso... [more]
A0A507FQQ4_9FUNG6.110e-528.48LisH domain-containing protein n=1 Tax=Chytriomyce... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 315..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..236
NoneNo IPR availablePANTHERPTHR39063ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOGcoord: 201..366
coord: 17..111
IPR006594LIS1 homology motifSMARTSM00667Lishcoord: 79..111
e-value: 0.0034
score: 26.6
IPR006594LIS1 homology motifPFAMPF16045LisH_2coord: 84..110
e-value: 1.6E-11
score: 43.1
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 79..111
score: 9.257813

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7683contigP-wetherbeei_contig7683:1546..2886 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7683.1.1mRNA_P-wetherbeei_contig7683.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7683 857..2911 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7683.1.1 ID=prot_P-wetherbeei_contig7683.1.1|Name=mRNA_P-wetherbeei_contig7683.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=447bp
MKGPAAGDVGNGDVDGITLRELKKNLQQSFERTGVLDDLMAQLRRQFVGE
LRSRGLAAAPPGSREAATGKRRRRPLGLEEQLHNSLVADHLRRRGLSQTL
AVFLPESGLGSAAATGASRSGSADAAISTPEDTLRGLLVEPGSALYKRVL
ARIRKVPSSTANASPENSVDKDGGNIDENDSGNGGVPSGGTAAAIPPPPT
LLTALVAEATRRSATPAASAAAQTDEAGPRAREALEARLAGVQDRWLENS
RRERNAPARGAEERMLAFQREAETRARRDADTEAARRLVHEAAAAEAAAA
ARVRREVDAVRQELRAEHDARVERLQAAVAAAEQRAAERARAADAAQYEA
RQRLLQEMDALRTREQACFLRCWFVFWLVWREDLSDCDSDFWSIGAFREL
IFVYGFLGNFFVRWFERAFSAGFRSADSVIGCLIESVWKSLLCACS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006594LisH