prot_P-wetherbeei_contig7649.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7649.1.1
Unique Nameprot_P-wetherbeei_contig7649.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length118
Homology
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Match: A0A7S3TVM8_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TVM8_EMIHU)

HSP 1 Score: 100 bits (249), Expect = 5.780e-25
Identity = 47/88 (53.41%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    1 CKVFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSRGWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDRGA 88
            C V+VGNLAY  +WQ LKDH +Q G+V+RADV        ++    GRS+G G+V F +P++A+ AI TLHD+DL GR  FVREDR A
Sbjct:   47 CSVYVGNLAYEVSWQDLKDHCKQVGDVVRADV--------LLENGTGRSKGCGIVVFGSPKDAKTAIDTLHDTDLKGRAIFVREDREA 126          
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Match: A0A7S0INT8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0INT8_9EUKA)

HSP 1 Score: 103 bits (257), Expect = 7.350e-25
Identity = 51/85 (60.00%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    2 KVFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSRGWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDR 86
            KV+VGNL+Y TTWQ+LKDHFRQAG V  A+V         ++G  GRS+G G+V  S+P EA  AIQTL+DS+LDGR  FVREDR
Sbjct:   70 KVYVGNLSYDTTWQRLKDHFRQAGEVTFAEV---------IVGPQGRSKGCGLVTLSSPDEAALAIQTLNDSELDGRNIFVREDR 145          
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Match: A0A6T7KII8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A6T7KII8_9EUKA)

HSP 1 Score: 101 bits (251), Expect = 3.270e-24
Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 0
Query:    3 VFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSRGWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDRG 87
            VFVGNLA++  W+ LK H   AG V+RADV         ++G DGRSRG+G+VE+++P+ AR+AI+TLHDS+L+GR+  VREDRG
Sbjct:   75 VFVGNLAWAVDWRALKAHMCSAGEVVRADV---------MVGEDGRSRGYGIVEYTSPRGARKAIETLHDSELEGRMVVVREDRG 150          
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Match: A0A7S4KDH2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KDH2_GUITH)

HSP 1 Score: 98.6 bits (244), Expect = 4.120e-24
Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    2 KVFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSRGWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDR 86
            +V+VGNL++   WQ LKDH R AGNVL ADV         + G DGRS+G G+VEFS+P+EA RAIQ L++++L GR+ FVREDR
Sbjct:   56 RVYVGNLSWECKWQDLKDHMRTAGNVLHADV---------MTGPDGRSKGCGLVEFSSPEEAVRAIQELNETELMGRMIFVREDR 131          
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Match: A0A6T7G480_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7G480_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.500e-24
Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    3 VFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSRGWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDRGAEAG 91
            V+VGNLAY T+WQ LKDH R AGN+++ADV         +  +DGRS+G G+V++  PQ+A RAI+ L +SDL+GR  FVREDR A +G
Sbjct:   24 VYVGNLAYETSWQDLKDHMRAAGNIVKADV---------LQMSDGRSKGCGIVQYEQPQDAARAIRELQNSDLNGRSMFVREDREAGSG 103          
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Match: R1FPR2_EMIHU (RNA-binding protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FPR2_EMIHU)

HSP 1 Score: 103 bits (256), Expect = 5.920e-24
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 0
Query:    1 CKVFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSRGWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDRGAEAG 91
            C V+VGNLAY  +WQ LKDH +Q G+V+RADV        ++    GRS+G G+V F +P++A+ AI TLHD+DL GR  FVREDR A AG
Sbjct:  157 CSVYVGNLAYEVSWQDLKDHCKQVGDVVRADV--------LLENGTGRSKGCGIVVFGSPKDAKTAIDTLHDTDLKGRAIFVREDREAGAG 239          
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Match: A0A7S0IME4_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IME4_9EUKA)

HSP 1 Score: 99.4 bits (246), Expect = 6.090e-24
Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    3 VFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSRGWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDRG 87
            VFVGNLA+S  W+ LK H R AG V RADV         +M  DGRSRG+G+VEFS+ + AR+AI TLHDS+L+GR   VREDRG
Sbjct:   34 VFVGNLAWSVEWKALKAHMRSAGEVERADV---------MMAEDGRSRGFGIVEFSSAKGARKAIATLHDSELEGRAIVVREDRG 109          
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Match: A0A7S1U1B8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1B8_9STRA)

HSP 1 Score: 100 bits (249), Expect = 9.820e-24
Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    2 KVFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSRGWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDR 86
            +V+VGNLA+STTWQ+LKDH RQAG V  A V         + G DGRS+G G+VEFS+ + AR AI +L+DS L+GR  FVREDR
Sbjct:  114 RVYVGNLAFSTTWQELKDHMRQAGEVTHASV---------LQGPDGRSKGCGLVEFSSAEAARNAISSLYDSQLNGRTIFVREDR 189          
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Match: A0A7S1XRR0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRR0_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.000e-23
Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    2 KVFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSRGWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDR 86
            +V+VGNLA+STTWQ+LKDH RQAG V  A V         + G DGRS+G G+VEFS+ + AR AI +L+DS L+GR  FVREDR
Sbjct:  115 RVYVGNLAFSTTWQELKDHMRQAGEVTHASV---------LQGPDGRSKGCGLVEFSSAEAARNAISSLYDSQLNGRTIFVREDR 190          
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Match: A0A7S0LIN6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIN6_9EUKA)

HSP 1 Score: 98.6 bits (244), Expect = 1.130e-23
Identity = 53/108 (49.07%), Postives = 68/108 (62.96%), Query Frame = 0
Query:    2 KVFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSRGWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDR-----------GAEAGPEPAALA 98
            KV+VGNL+Y TTWQ+LKDHFRQAG V+ ADV         +  + GRS+G G+V  + PQEA  AI+ L++S+LDGR  FVREDR           G+  G  PA +A
Sbjct:   43 KVYVGNLSYDTTWQRLKDHFRQAGEVVHADV---------MQESSGRSKGCGLVTLANPQEAAYAIEHLNESELDGRNIFVREDRENAMGGGLPAPGSRRGMAPAKVA 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7649.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3TVM8_EMIHU5.780e-2553.41Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S0INT8_9EUKA7.350e-2560.00Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A6T7KII8_9EUKA3.270e-2455.29Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4KDH2_GUITH4.120e-2456.47Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A6T7G480_9STRA4.500e-2453.93Hypothetical protein n=1 Tax=Attheya septentrional... [more]
R1FPR2_EMIHU5.920e-2453.85RNA-binding protein n=1 Tax=Emiliania huxleyi TaxI... [more]
A0A7S0IME4_9EUKA6.090e-2458.82Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S1U1B8_9STRA9.820e-2457.65Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1XRR0_9STRA1.000e-2357.65Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S0LIN6_9EUKA1.130e-2349.07Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 2..83
e-value: 9.4E-17
score: 71.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 3..78
e-value: 4.9E-15
score: 55.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 1..87
score: 15.408587
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..90
e-value: 1.5E-23
score: 84.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..118
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 1..114
NoneNo IPR availablePANTHERPTHR23003:SF3FI21236P1coord: 1..114
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 1..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7649contigP-wetherbeei_contig7649:1..542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7649.1.1mRNA_P-wetherbeei_contig7649.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7649 1..542 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7649.1.1 ID=prot_P-wetherbeei_contig7649.1.1|Name=mRNA_P-wetherbeei_contig7649.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp
CKVFVGNLAYSTTWQKLKDHFRQAGNVLRADVSRPERRRHVVMGADGRSR
GWGVVEFSAPQEARRAIQTLHDSDLDGRLAFVREDRGAEAGPEPAALAAA
AGGGGGGGGGGGGRPGMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf