prot_P-wetherbeei_contig764.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig764.1.1
Unique Nameprot_P-wetherbeei_contig764.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length163
Homology
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BLAST of mRNA_P-wetherbeei_contig764.1.1 vs. uniprot
Match: D7G636_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G636_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 2.040e-38
Identity = 85/168 (50.60%), Postives = 114/168 (67.86%), Query Frame = 0 
Query:    1 QALQLYKTSYARFKAQEKLDEAEQLITDGAAAMARRKELNAATELGVLLVESFEENSRPVQEKYLKQLQSVADAWPCPGIELS-----AVAWAGGSAELAAKDLRVRLARAYLVTDDYGGAARNFATAGAGAVAEYATVLRDWSRMGYKSERDLFLCRAVLHVLSLNR 163
            +ALQLYKTSY+R KAQ +LD+AE+L+T GA AM++  ELNAATELG+L+V SFEEN R V E  L QL+ VA A   PG+E+S     A+ W   +   AA +LR+ +AR+ + T +   AAR FA +G     EY+ +++ W+  GY  E DLF+CRAVLH LS +R
Sbjct:   29 EALQLYKTSYSRLKAQGRLDDAEELLTAGAIAMSKENELNAATELGLLIVTSFEENGREVDEARLSQLKRVAVAMT-PGVEMSEFLKRAIRWTRHTKTEAAFELRLIMARSAVTTGNLAEAARYFAVSG--CPTEYSALVKQWAAKGYPGETDLFICRAVLHTLSYDR 193
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BLAST of mRNA_P-wetherbeei_contig764.1.1 vs. uniprot
Match: A0A836CH96_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH96_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.180e-11
Identity = 53/123 (43.09%), Postives = 72/123 (58.54%), Query Frame = 0 
Query:   16 QEKLDEAEQLITDGAAAMARRKELNAATELGVLLVESFE----------ENSRPVQEKYLKQLQSVADAWPCPGIELS----AVAWAGGSAELAAKDLRVRLARAYLVTDDYGGAARNFATAG 124
            Q K++EA++LIT GA +MA   E NAATELG+LLVES E          E + P  +K L +L ++ DA      +++    AV +A GS E  A+ LR+ LAR+Y   DD G AAR +A  G
Sbjct:   18 QGKVEEAQELITVGACSMAEHNERNAATELGILLVESLEGEQGETGSDPEAAMP-SDKGLVRLVAIKDAMSVSTEQIAFLKHAVRYASGSQEPQAQVLRLSLARSYEEMDDIGPAARQYAIMG 139
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BLAST of mRNA_P-wetherbeei_contig764.1.1 vs. uniprot
Match: A0A3M6VND9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VND9_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.980e-9
Identity = 55/175 (31.43%), Postives = 93/175 (53.14%), Query Frame = 0 
Query:    2 ALQLYKTSYARF-KAQE----KLDEAEQLITDGAAAMARRKELNAATELGVLLVESFEENSRPVQEKYLKQLQSVADAW---PCPGIELS-----AVAWAG--GSAELAAKDLRVRLARAYLVTDDYGGAARNFATAGAGAVAEYATVLRDWSRMGYKSERDLFLCRAVLHVLSL 161
            ALQ+YKT + R  K +E    + ++A  L  +      + +E  AA E+  L++  F +   PV E++ ++++ +  A+   P    +L+     AV W+   G+ +    +L++ LARAY   +++  A ++F  A      E A +L  WS +GY SE DL+L RAVL +LSL
Sbjct:   47 ALQMYKTLFMRLLKGEEPNITQQEKAINLAFNATIDFVKNEENKAAIEMANLMISVFTDYHHPVDEQHKQRIRDIVSAFTLKPKFSTDLASFLKNAVKWSAIEGARKRGDPELQLLLARAYQTAEEFSNAMKHFLHAE--NPQELAEMLFQWSTLGYPSESDLYLTRAVLQLLSL 219
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BLAST of mRNA_P-wetherbeei_contig764.1.1 vs. uniprot
Match: A9RVM5_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RVM5_PHYPA)

HSP 1 Score: 53.9 bits (128), Expect = 1.720e-5
Identity = 28/76 (36.84%), Postives = 47/76 (61.84%), Query Frame = 0 
Query:    1 QALQLYKTSYARFKAQEKLDEAEQLITDGAAAMARRKELNAATELGVLLVESFEENSRPVQEKYLKQLQSVADAWP 76
            +A Q+YKT ++R+   +K +EA +L+  GA AM    E+   TELGVLL+++F     P     L Q++++ +A+P
Sbjct:   28 EAQQMYKTIHSRYMHAKKYNEAIELLNSGAVAMLNHGEVTCGTELGVLLIQTFNVAKLPFDSSTLDQIRTIYNAYP 103
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig764.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G636_ECTSI2.040e-3850.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CH96_9STRA3.180e-1143.09Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A3M6VND9_9STRA1.980e-931.43Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A9RVM5_PHYPA1.720e-536.84Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007317Golgi to ER traffic protein 4PFAMPF04190GET4coord: 16..162
e-value: 8.6E-20
score: 71.6
IPR007317Golgi to ER traffic protein 4PANTHERPTHR12875UNCHARACTERIZEDcoord: 2..162
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..163
e-value: 2.6E-27
score: 98.1
NoneNo IPR availablePANTHERPTHR12875:SF0GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOGcoord: 2..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig764contigP-wetherbeei_contig764:166..1082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig764.1.1mRNA_P-wetherbeei_contig764.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig764 166..1082 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig764.1.1 ID=prot_P-wetherbeei_contig764.1.1|Name=mRNA_P-wetherbeei_contig764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp
QALQLYKTSYARFKAQEKLDEAEQLITDGAAAMARRKELNAATELGVLLV
ESFEENSRPVQEKYLKQLQSVADAWPCPGIELSAVAWAGGSAELAAKDLR
VRLARAYLVTDDYGGAARNFATAGAGAVAEYATVLRDWSRMGYKSERDLF
LCRAVLHVLSLNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007317GET4
IPR011990TPR-like_helical_dom_sf