prot_P-wetherbeei_contig7612.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7612.4.1
Unique Nameprot_P-wetherbeei_contig7612.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length48
Homology
BLAST of mRNA_P-wetherbeei_contig7612.4.1 vs. uniprot
Match: A0A6H5L7R8_9PHAE (ERCC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7R8_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 4.680e-11
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 WEPLLLIDNREADCLSVQAALLQNGVACEVRVLPLGDMLWVLRPR 45
            WE  L++DNRE + +SVQ++LLQ G+ CE R LPLGDMLW+ R R
Sbjct:  248 WEAWLVVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKR 292          
BLAST of mRNA_P-wetherbeei_contig7612.4.1 vs. uniprot
Match: A0A836CKB8_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB8_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.920e-7
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 WEPLLLIDNREADCLSVQAALLQNGVACEVRVLPLGDMLWVLR 43
            W P+L+ D RE    + QAA+L   + CEVR LPLGDMLWV R
Sbjct:   13 WTPVLIFDTREEHAQASQAAVLNANMLCEVRSLPLGDMLWVAR 55          
BLAST of mRNA_P-wetherbeei_contig7612.4.1 vs. uniprot
Match: A0A7S4MR95_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MR95_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.900e-7
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 WEPLLLIDNREADCLSVQAALLQNGVACEVRVLPLGDMLWVLRPRR 46
            W  +LL+D RE     VQA L  +G+ CEVR LP+GDMLW+ R RR
Sbjct:   75 WTMILLLDVREQRADHVQAKLRMSGLNCEVRSLPIGDMLWIARGRR 120          
BLAST of mRNA_P-wetherbeei_contig7612.4.1 vs. uniprot
Match: A0A482R207_9EURY (ERCC4 domain-containing protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A482R207_9EURY)

HSP 1 Score: 52.4 bits (124), Expect = 1.420e-6
Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    1 WEPLLLIDNREA----DCLSVQAALLQNGVACEVRVLPLGDMLWVLRPRR 46
            WE ++LID RE     D   + A LL   +ACEVR LPLGD +W++R +R
Sbjct:  320 WEVVMLIDTREIRSRKDRSYIHAQLLTRNIACEVRALPLGDFMWIVRRKR 369          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7612.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L7R8_9PHAE4.680e-1160.00ERCC4 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CKB8_9STRA1.920e-755.81Restriction endonuclease type II-like protein n=1 ... [more]
A0A7S4MR95_9STRA2.900e-754.35Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A482R207_9EURY1.420e-648.00ERCC4 domain-containing protein (Fragment) n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.10130coord: 2..46
e-value: 5.3E-5
score: 25.0
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 2..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7612contigP-wetherbeei_contig7612:2809..2952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7612.4.1mRNA_P-wetherbeei_contig7612.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7612 2808..2952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7612.4.1 ID=prot_P-wetherbeei_contig7612.4.1|Name=mRNA_P-wetherbeei_contig7612.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=48bp
WEPLLLIDNREADCLSVQAALLQNGVACEVRVLPLGDMLWVLRPRRGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011335Restrct_endonuc-II-like