prot_P-wetherbeei_contig7558.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7558.1.1
Unique Nameprot_P-wetherbeei_contig7558.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length79
Homology
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Match: D7G5K5_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K5_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 4.980e-16
Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    6 VWKGLHGDLCVLCREGGTLLCCDYCPMAYHMQPCLGLMFEPNGLWACPGC-------LRRVAEARLGGGRSGGG 72
            ++KG+H   C +C EGG L+CCDYCP ++HM+PCL L  +P G WACP C       +   A +  GGG+ GGG
Sbjct: 2959 LFKGVHEATCSICGEGGALICCDYCPASFHMEPCLDLAKDPAGPWACPLCRAGTPKPVNPKAASLKGGGKGGGG 3032          
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Match: A0A6H5J8B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8B2_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.120e-14
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    6 VWKGLHGDLCVLCREGGTLLCCDYCPMAYHMQPCLGLMFEPNGLWACPGC 55
            ++KG+H   C +C EGG L+CCDYCP ++HM+PCL L  +P G WACP C
Sbjct: 2383 LFKGVHEATCSMCGEGGALICCDYCPASFHMEPCLELAKDPAGPWACPLC 2432          
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Match: A0A6N2B2F8_SOLCI (PHD-type domain-containing protein n=1 Tax=Solanum chilense TaxID=4083 RepID=A0A6N2B2F8_SOLCI)

HSP 1 Score: 67.0 bits (162), Expect = 3.410e-11
Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 0
Query:   11 HGDLCVLCREGGTLLCCDYCPMAYHMQPCLGLMFEPNGLWACPGCLRRV 59
            + D C++C +GG L+CCD C   YH + CLG+   PNGLW CP C+ ++
Sbjct:  230 YDDACMICADGGDLMCCDNCSSTYHHKICLGMQEVPNGLWYCPFCVCKI 278          
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Match: M1CHG0_SOLTU (Uncharacterized protein n=2 Tax=Solanum tuberosum TaxID=4113 RepID=M1CHG0_SOLTU)

HSP 1 Score: 65.5 bits (158), Expect = 1.260e-10
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0
Query:   11 HGDLCVLCREGGTLLCCDYCPMAYHMQPCLGLMFEPNGLWACPGCLRRV 59
            + D C++C +GG L+CCD C   YH   CLG+   PNG W CP C+ ++
Sbjct:  230 YDDACMICADGGNLMCCDNCSSTYHHNKCLGMQEVPNGSWYCPFCVCKI 278          
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Match: UPI000E1C4E15 (increased DNA methylation 1-like n=1 Tax=Solanum lycopersicum TaxID=4081 RepID=UPI000E1C4E15)

HSP 1 Score: 65.1 bits (157), Expect = 1.650e-10
Identity = 22/49 (44.90%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   11 HGDLCVLCREGGTLLCCDYCPMAYHMQPCLGLMFEPNGLWACPGCLRRV 59
            + D C++C +GG L+CCD C   YH + CLG+   PNG W CP C+ ++
Sbjct:  235 YDDACMICADGGNLMCCDNCSSTYHHKICLGMQEVPNGSWYCPFCVCKI 283          
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Match: M1VH65_CYAM1 (PHD-type domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VH65_CYAM1)

HSP 1 Score: 65.1 bits (157), Expect = 1.710e-10
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   13 DLCVLCREGGTLLCCDYCPMAYHMQPCLGLMFEPNGLWACPGCLRRV-AEARL 64
            D+C +C  GG ++CCD CPM YH+Q C+GL   P+G W CP C+ R+  E R+
Sbjct:  178 DVCSICGLGGDIVCCDECPMGYHLQ-CIGLPSIPSGEWFCPACVLRIKVEERM 229          
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Match: A7S9J4_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7S9J4_NEMVE)

HSP 1 Score: 64.3 bits (155), Expect = 3.250e-10
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    8 KGLHGDLCVLCREGGTLLCCDYCPMAYHMQPCL--GLMFEPNGLWACPGCLRRVAEARL 64
            + +H D C +C++GG LLCCD CPMAYH++ CL   +M  P G W CP C     + ++
Sbjct:    7 EDIHSDYCRVCKDGGQLLCCDKCPMAYHLK-CLIPPMMRVPTGEWKCPRCQSEPLKGKV 64          
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Match: T2MD91_HYDVU (Chromodomain-helicase-DNA-binding protein 4 (Fragment) n=7 Tax=Hydra vulgaris TaxID=6087 RepID=T2MD91_HYDVU)

HSP 1 Score: 63.5 bits (153), Expect = 6.180e-10
Identity = 26/50 (52.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    8 KGLHGDLCVLCREGGTLLCCDYCPMAYHMQPCLG--LMFEPNGLWACPGC 55
            +  HGD C +CR+GG LLCCD+CP  YHM+ C+   L+  P G W CP C
Sbjct:  247 ENFHGDYCKICRDGGELLCCDFCPGTYHMR-CVKPQLITVPEGEWKCPLC 295          
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Match: A0A3P7IXV6_STRVU (PHD-type domain-containing protein n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7IXV6_STRVU)

HSP 1 Score: 60.1 bits (144), Expect = 9.930e-10
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0
Query:    7 WKGLHGDLCVLCREGGTLLCCDYCPMAYHM---QPCLGLMFEPNGLWACPGCLR 57
            WK ++   CV+CREGG LLCCD CP ++H+   +P +     P G W C  C R
Sbjct:   53 WKSINRTYCVVCREGGELLCCDACPASFHLLCHEPVIRREAIPRGRWLCNRCHR 106          
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Match: A0A2Z7D1D6_9LAMI (PHD-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7D1D6_9LAMI)

HSP 1 Score: 62.8 bits (151), Expect = 1.100e-9
Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:   10 LHGDLCVLCREGGTLLCCDYCPMAYHMQPCLGLMFEPNGLWACPGCLRRV 59
            LH D C++C +GG LLCC+ C   YH Q C+G+   P G W CP C+ +V
Sbjct:  156 LHDDACMICADGGDLLCCEKCNSTYH-QACMGMKDVPEGSWYCPYCVCKV 204          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7558.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5K5_ECTSI4.980e-1647.30Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5J8B2_9PHAE1.120e-1456.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6N2B2F8_SOLCI3.410e-1146.94PHD-type domain-containing protein n=1 Tax=Solanum... [more]
M1CHG0_SOLTU1.260e-1044.90Uncharacterized protein n=2 Tax=Solanum tuberosum ... [more]
UPI000E1C4E151.650e-1044.90increased DNA methylation 1-like n=1 Tax=Solanum l... [more]
M1VH65_CYAM11.710e-1049.06PHD-type domain-containing protein n=1 Tax=Cyanidi... [more]
A7S9J4_NEMVE3.250e-1044.07Predicted protein n=1 Tax=Nematostella vectensis T... [more]
T2MD91_HYDVU6.180e-1052.00Chromodomain-helicase-DNA-binding protein 4 (Fragm... [more]
A0A3P7IXV6_STRVU9.930e-1044.44PHD-type domain-containing protein n=1 Tax=Strongy... [more]
A0A2Z7D1D6_9LAMI1.100e-948.00PHD-type domain-containing protein n=1 Tax=Dorcoce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 14..56
e-value: 9.4E-7
score: 38.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 9..64
e-value: 1.2E-12
score: 49.2
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 8..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7558contigP-wetherbeei_contig7558:789..1025 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7558.1.1mRNA_P-wetherbeei_contig7558.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7558 331..1099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7558.1.1 ID=prot_P-wetherbeei_contig7558.1.1|Name=mRNA_P-wetherbeei_contig7558.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=79bp
MGSTPVWKGLHGDLCVLCREGGTLLCCDYCPMAYHMQPCLGLMFEPNGLW
ACPGCLRRVAEARLGGGRSGGGAGDKAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD