prot_P-wetherbeei_contig7476.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7476.2.1
Unique Nameprot_P-wetherbeei_contig7476.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length283
Homology
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A835YKN9_9STRA (Putative intraflagellar transport protein 140 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN9_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.040e-68
Identity = 124/252 (49.21%), Postives = 162/252 (64.29%), Query Frame = 0
Query:   49 MASLFFGYP-TAGSKGNATVLSWCKAANLLAVATDDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALDWQPHTRTLAVGWADGQVSVWNTD------RVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGG-ITSAVQHRRKSAITAAVCCGSRPP---------MLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 283
            M+SLFF Y  + GS   AT L+WCK+  LLAVA +DG +  +  +G V  A +IVRE      +   +DW    +TLAVGWADGQ+S+W+        R  C C N +VHR  VT+L W+PAG  LVTGD  GTVC+WK D  GG +   VQ+R+K A+TAAV CGS            + PPFFF T+ G VC+ADD GHCT++QQL S VD+L+F+E A+RL+V+TR LLM QL++ +D  + Q MK KL
Sbjct:    1 MSSLFFDYKCSGGSTAAATALTWCKSEYLLAVAAEDGHIYFYQDEGVVAPAATIVRETH----VPTLMDWHKKGKTLAVGWADGQISLWSVQDQIQDSRTTCSCANGAVHRAPVTLLLWNPAGTCLVTGDAAGTVCVWKCDSHGGTVLPLVQYRKKGAVTAAVFCGSTSSSQXXXXXXXLSPPFFFATDTGTVCYADDLGHCTDIQQLGSCVDTLMFYEGAMRLIVVTRSLLMVQLQVADDAHVTQFMKVKL 248          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: D8LH96_ECTSI (Intraflagellar transport protein 140 puative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH96_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 6.490e-63
Identity = 126/255 (49.41%), Postives = 155/255 (60.78%), Query Frame = 0
Query:   49 MASLFFGYPTAGS----KGNATV-LSWCKAANLLAVATDDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALDWQPHTRTLAVGWADGQVSVWNT------DRVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRK-SAITAAVCCGS--------RPPMLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 283
            M SLFF YP  G     +G  T  L+WCK+ NLLA A D GRV+++  +G  V A SI R G +QR  A  +DW P  R LA+GW DGQVS WN       D   C C+N  VH+  +                +GG +C+WK D RG +  +VQ+RRK SAITAAV CGS             P FFF TE+G VC+ADD GHC+EVQQLTS VD L+F+E A RLVV+TR LLMTQL++ EDGR++Q MK KL
Sbjct:    1 MNSLFFDYPCKGDGRDERGAVTTDLAWCKSENLLACALDSGRVAVYQDEGAEVVAASIAR-GNRQR--ASVMDWSPRGRLLAIGWVDGQVSTWNVMEPLQEDTSICACSNQGVHKQPIXXXXXXXXXXXXXXXXKGGVICVWKADARGNMAPSVQYRRKNSAITAAVFCGSPSHSADALAQAFSPSFFFSTESGAVCYADDLGHCSEVQQLTSPVDRLMFYEAARRLVVITRSLLMTQLQVGEDGRVSQFMKVKL 252          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A8J5XQB9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQB9_DIALT)

HSP 1 Score: 137 bits (346), Expect = 7.510e-33
Identity = 79/223 (35.43%), Postives = 118/223 (52.91%), Query Frame = 0
Query:   77 LAVATDDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALDWQPHTRTLAVGWADGQVSVWNTDRVACVCTNSSVHRH---AVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAITAAVCCGSRPPML-------------PPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 283
            LAVA + G V+    +GE +++ ++ +    +    V + W P+   LA+ WADG +S+WN +      TN     H   AVTV+QW P G+RL++GD GG V +WK+D  G +++   H+R   IT AV   SR                 PPF+F  + G +C ADD G+C +   L   + +++F+     LVVLTR L+M Q R    G++ Q MK KL
Sbjct:  665 LAVAREGGIVNFFQEEGESLESRTVSKYPPSE---VVTIAWCPNKPVLAIAWADGTLSIWN-ESTGTGVTNDDRDVHSGRAVTVVQWSPDGSRLMSGDSGGRVSVWKLDPTGRLSAVCTHQRSGTITHAVYKPSRAKSAASAIASGFAVAEQPPFYFANDGGAICIADDMGNCNDTVSLGMPLAAMLFYSAKEHLVVLTRALVMAQYRAEPGGKMTQVMKVKL 883          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A7S2G5B5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5B5_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.570e-32
Identity = 71/166 (42.77%), Postives = 99/166 (59.64%), Query Frame = 0
Query:  117 WQPHTRTLAVGWADGQVSVW--NTDRVACVCTNSSVHRHA-VTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAITAAVCCG-----SRPPML-----PPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRM 269
            WQ   + LA GW DG ++++  N  ++ CV +N   H  A ++ L W+P  +RLV+GD  G V +WK D RG ++   Q++  SA TA V        SR  +L     P FF+GTE G V FADD GH TEVQ L+S+VD + F+    RLV++TR LLM QL++
Sbjct:    7 WQAKNKILATGWEDGHIAIYSLNNQKLDCVYSNDKDHSGARLSFLMWNPMSSRLVSGDSAGVVRVWKSDSRGALSMYKQYKCNSATTAGVFSTAGHMQSRSDVLGHAFSPSFFYGTEDGKVYFADDLGHMTEVQALSSSVDCMKFYGDKSRLVIITRALLMVQLQV 172          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A7S0SRA0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRA0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 6.830e-23
Identity = 74/247 (29.96%), Postives = 112/247 (45.34%), Query Frame = 0
Query:   65 ATVLSWCKAANLLAVATDDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALD-------WQPHTRTLAVGWADGQVSVWNTD---RVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAITAAV------------------CCGSRPPMLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 283
            A  LSW    ++ A+A+     SI   D E      +  EG Q     +A D       WQP+ + + +GWADG +S W  D   R     +NSS                                D RG ++   Q++RK AIT A+                     S+    P FFFGT+ G + +ADD GHC++VQQL S +D ++F E   RL+++TR LL++Q ++ EDG++++  + KL
Sbjct:   17 ANQLSWSNNDSIAAIAS----YSIDHNDKESYQVLFVNSEGIQITGPTIAHDQEATVFEWQPNGKIVVIGWADGMISSWLVDGKSRAVSTYSNSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVRGTLSPIRQYKRKGAITTAIFYVLPVKSDLLRKNENNSSSTSKNSYSPSFFFGTDQGVIVYADDLGHCSDVQQLPSIIDIMLFFEEKSRLIIITRSLLLSQYQVGEDGKVSRLSQVKL 259          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A6H5KMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH2_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.230e-22
Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = 0
Query:  190 AVQHRRK-SAITAAVCCGS--------RPPMLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQL 267
            +VQ+RRK SAITAAV CGS             P FFF TE+G VC+ADD GHC+EVQQLTS VD L+F+E A RLVV+TR LLMTQL
Sbjct:    4 SVQYRRKNSAITAAVFCGSPSHSADALAQAFSPSFFFSTESGAVCYADDLGHCSEVQQLTSPVDRLMFYEAARRLVVITRSLLMTQL 90          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A7S3KPB5_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KPB5_EUPCR)

HSP 1 Score: 97.8 bits (242), Expect = 2.240e-21
Identity = 54/167 (32.34%), Postives = 90/167 (53.89%), Query Frame = 0
Query:  123 TLAVGWADGQVSVWNTDRVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAITAAVCCG------SRPPMLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 283
            +LA+GW DG V++WN D          +H+  +T + +   G R+VTGD+ GTV +W+     G+T   Q+ +  +IT    CG      S       FFFG + G VC ADD  +C EV ++  ++ S++F+E+   ++++T  LL+ Q R+  + ++    K KL
Sbjct:    4 SLAIGWQDGVVTLWNEDP-RLTREEKVLHKSEITNITFSQDGTRMVTGDKSGTVGVWRT--HRGLTPICQYSKSGSITNVAFCGLAYEEDSMEKWNSLFFFGGKKGSVCLADDLKNCHEVCKVGGSIKSMLFYEKENSVIIITSHLLLVQFRINLNEKLVPDRKVKL 167          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A7S0QPT2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPT2_9CRYP)

HSP 1 Score: 85.1 bits (209), Expect = 2.380e-15
Identity = 68/221 (30.77%), Postives = 99/221 (44.80%), Query Frame = 0
Query:   70 WCKAAN---LLAVATDDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALDWQPHTRT-LAVGWADGQVSVWNTDRVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGG-ITSAVQHRRKSAITAAV-----CCGSRPPMLPPFFFGTEAGHV-CFADDAGHCTEVQQL------TSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDG 273
            WC       LL VA  DG ++    +GE +   S  R   Q   +A    W P     LA GW DG +++W+         NS   RH +TVL+W P G R+V+GDR GTV +WKV  +G  I      + K A+T  V        +     P F+F  E G + C  DD+  C E+ ++       S    L +      LV +   ++MT+L+  +D 
Sbjct:   29 WCPKEEDKPLLVVACSDGALTKFHDEGEKIGVES--RRPSQPTCIA----WGPAPSFFLAAGWHDGVITLWDEKNTLPREDNSVHERHPITVLKWSPKGDRMVSGDRNGTVGVWKVVDKGRLICQCTIQKGKVAVTHVVFRSNDSRAATADQAPSFYFSGEDGIIYCGTDDSSRCREIFKMDGMDGSASGTAVLQYLAENDELVGINDHVIMTRLKGPDDS 243          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A8B7NSE6_HYAAZ (intraflagellar transport protein 140 homolog n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NSE6_HYAAZ)

HSP 1 Score: 79.0 bits (193), Expect = 1.060e-13
Identity = 46/142 (32.39%), Postives = 76/142 (53.52%), Query Frame = 0
Query:   66 TVLSWCKAANLLAVAT----DDGRVSIHSRDGEVVDATSIVREGKQQRVLAVALDWQPHTRTLAVGWADGQVSVWNTDRVACVCTNSSVHRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAITAAV 203
            T ++W   A+ LAVA+      G V++++ +G++     I      Q     +L W P  R LAVGW  G++ +WN D    +    S+HR A+T+L++  AG+RLVT D+ G+V  W+    G + +A  H  K +++  V
Sbjct:   19 THMAWHSEASCLAVASYSEEKGGTVNVYTGEGKLCSEVDIPPHPTAQ---VTSLAWHPIQRLLAVGWETGELYLWN-DHEEELHQIQSLHRAAITILEFSHAGSRLVTADQSGSVVGWRSSSSGNLQTAFTHELKDSLSQVV 156          
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Match: A0A482RUU9_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUU9_9ARCH)

HSP 1 Score: 77.4 bits (189), Expect = 4.210e-13
Identity = 43/143 (30.07%), Postives = 69/143 (48.25%), Query Frame = 0
Query:  174 GTVCMWKVDGRGGITSAVQHRRKSAITAAVCC--------GSRPP-------------------------MLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHERAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL 283
            G VC+W  D RG +    Q++RK  IT  V C        G++                             P FFF T+ G +C+ADD GHCT++  L+S++D L+F+  +  L+++TR LL+    +  +G+I++    KL
Sbjct:    4 GVVCVWSADNRGMLAPMRQYKRKGEITQLVFCVLSSKLDLGNKAAASISXXXXXXXXXXXXXEGGVKISQFTPSFFFSTDRGTLCYADDMGHCTDIHSLSSSIDILLFYPASSYLLLITRSLLLITYHISGEGKISKVHSVKL 146          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7476.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A835YKN9_9STRA2.040e-6849.21Putative intraflagellar transport protein 140 n=1 ... [more]
D8LH96_ECTSI6.490e-6349.41Intraflagellar transport protein 140 puative n=1 T... [more]
A0A8J5XQB9_DIALT7.510e-3335.43Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S2G5B5_9STRA8.570e-3242.77Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S0SRA0_9STRA6.830e-2329.96Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A6H5KMH2_9PHAE1.230e-2263.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3KPB5_EUPCR2.240e-2132.34Hypothetical protein (Fragment) n=1 Tax=Euplotes c... [more]
A0A7S0QPT2_9CRYP2.380e-1530.77Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A8B7NSE6_HYAAZ1.060e-1332.39intraflagellar transport protein 140 homolog n=1 T... [more]
A0A482RUU9_9ARCH4.210e-1330.07Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 104..137
e-value: 3.7
score: 13.4
coord: 140..180
e-value: 0.001
score: 28.3
coord: 45..90
e-value: 16.0
score: 9.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 148..189
score: 10.074014
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 68..161
e-value: 1.8E-11
score: 44.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 44..275
e-value: 2.4E-19
score: 71.9
NoneNo IPR availablePANTHERPTHR15722:SF7INTRAFLAGELLAR TRANSPORT PROTEIN 140 HOMOLOGcoord: 64..283
NoneNo IPR availablePANTHERPTHR15722IFT140/172-RELATEDcoord: 64..283
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 61..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7476contigP-wetherbeei_contig7476:1214..2639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7476.2.1mRNA_P-wetherbeei_contig7476.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7476 1214..2639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7476.2.1 ID=prot_P-wetherbeei_contig7476.2.1|Name=mRNA_P-wetherbeei_contig7476.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp
IRLLKHIGAHSPLAGFKPSRRVPGRATSHRSAGITASRKVERKRVKQSMA
SLFFGYPTAGSKGNATVLSWCKAANLLAVATDDGRVSIHSRDGEVVDATS
IVREGKQQRVLAVALDWQPHTRTLAVGWADGQVSVWNTDRVACVCTNSSV
HRHAVTVLQWDPAGARLVTGDRGGTVCMWKVDGRGGITSAVQHRRKSAIT
AAVCCGSRPPMLPPFFFGTEAGHVCFADDAGHCTEVQQLTSAVDSLVFHE
RAVRLVVLTRGLLMTQLRMCEDGRIAQHMKAKL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR024977Apc4_WD40_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf