prot_P-wetherbeei_contig7328.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7328.1.1
Unique Nameprot_P-wetherbeei_contig7328.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length390
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7328.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 193..226
e-value: 0.2
score: 20.7
coord: 261..294
e-value: 7.5E-5
score: 32.1
coord: 159..192
e-value: 210.0
score: 3.3
coord: 227..260
e-value: 0.032
score: 23.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 227..260
score: 10.1189
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 193..226
score: 9.9124
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 261..294
score: 11.151401
NoneNo IPR availablePFAMPF13432TPR_16coord: 178..227
e-value: 1.4E-5
score: 25.5
NoneNo IPR availablePFAMPF13414TPR_11coord: 234..275
e-value: 1.1E-8
score: 34.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availablePANTHERPTHR44943CELLULOSE SYNTHASE OPERON PROTEIN Ccoord: 234..309
NoneNo IPR availablePANTHERPTHR44943CELLULOSE SYNTHASE OPERON PROTEIN Ccoord: 141..259
NoneNo IPR availablePANTHERPTHR44943:SF4CELLULOSE SYNTHASE OPERON PROTEIN Ccoord: 141..259
NoneNo IPR availablePANTHERPTHR44943:SF4CELLULOSE SYNTHASE OPERON PROTEIN Ccoord: 234..309
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 261..292
score: 10.271131
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 227..371
e-value: 1.3E-22
score: 82.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 51..226
e-value: 1.9E-13
score: 52.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 141..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7328contigP-wetherbeei_contig7328:347..2316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7328.1.1mRNA_P-wetherbeei_contig7328.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7328 223..3121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7328.1.1 ID=prot_P-wetherbeei_contig7328.1.1|Name=mRNA_P-wetherbeei_contig7328.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=390bp
MSRNRSTAVLPPPPSAPGDAAVPVTPPSPRPLGLSSFTTAGAAATRMPRC
ARKLREEALSVLWPQARRLNAAAARAATNPAALTAAMTEALTPLEAALEE
PLRHGQVLLQMARALQEDAAVAAAAGTGAGTAAGSDTTATEEEAAVCLAA
AARLEPPRPDVLFAYAFALYRAGDAVGAEASYLNLLSMEPGHAAAWYNLG
YMASAAGDAEAAVDRFVRAAACAPDDAEIRVHLGNAHKDCGEAEAAAECY
RHAARLDPQSLEANYNLGVVLQAAGRWDEAIDSFRRAIDVNPLCAEAHVG
LAAVMLARDDAAAESSGGGGGGDGGYGGGVTVAAGEASAAETADAVAACL
NTVLRIDPANEAALSLLRELTGGGRSRLLSPSLVACEGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf